RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 C11orf52Q96A22 123 aa8.69□□□□□ -1.02
MSH6-201ENST00000234420 ADAMTS20P59510 1910 aa8.69□□□□□ -1.02
MSH6-201ENST00000234420 TMEM256-PLSCR3K7ERE1 68 aa8.69□□□□□ -1.02
MSH6-201ENST00000234420 Q6P435 159 aa8.69□□□□□ -1.02
MSH6-201ENST00000234420 IGKV1D-17A0A075B6S4 117 aa8.69□□□□□ -1.02
MSH6-201ENST00000234420 PRR4Q16378 134 aa8.69□□□□□ -1.02
MSH6-201ENST00000234420 IGKV1-17P01599 117 aa8.69□□□□□ -1.02
MSH6-201ENST00000234420 BPY2O14599 106 aa8.68□□□□□ -1.02
MSH6-201ENST00000234420 SPATA12Q7Z6I5 190 aa8.68□□□□□ -1.02
MSH6-201ENST00000234420 PCNX3Q9H6A9 2034 aa8.68□□□□□ -1.02
MSH6-201ENST00000234420 A0A0J9YXV3 536 aa8.68□□□□□ -1.02
MSH6-201ENST00000234420 RNF5Q99942 180 aa8.68□□□□□ -1.02
MSH6-201ENST00000234420 B9D2Q9BPU9 175 aa8.68□□□□□ -1.02
MSH6-201ENST00000234420 VOPP1Q96AW1 172 aa8.68□□□□□ -1.02
MSH6-201ENST00000234420 CENPVL3A0A0U1RRI6 287 aa8.68□□□□□ -1.02
MSH6-201ENST00000234420 ZNF134P52741 427 aa8.67□□□□□ -1.02
MSH6-201ENST00000234420 IGLV2-8P01709 118 aa8.67□□□□□ -1.02
MSH6-201ENST00000234420 FXYD5Q96DB9 178 aa8.67□□□□□ -1.02
MSH6-201ENST00000234420 HIGD1BQ9P298 99 aa8.67□□□□□ -1.02
MSH6-201ENST00000234420 IGHV4-61A0A0C4DH41 118 aa8.66□□□□□ -1.02
MSH6-201ENST00000234420 TPSG1Q9NRR2 321 aa8.66□□□□□ -1.02
MSH6-201ENST00000234420 RETNLBQ9BQ08 111 aa8.66□□□□□ -1.02
MSH6-201ENST00000234420 IL17DQ8TAD2 202 aa8.66□□□□□ -1.02
MSH6-201ENST00000234420 DIAPH2-AS1Q14236 149 aa8.66□□□□□ -1.02
MSH6-201ENST00000234420 BLCAPP62952 87 aa8.65□□□□□ -1.02
MSH6-201ENST00000234420 IGKV1D-37A0A075B6S9 117 aa8.65□□□□□ -1.02
MSH6-201ENST00000234420 TRBV6-6A0A0A6YYG2 114 aa8.65□□□□□ -1.03
MSH6-201ENST00000234420 COX7A2LO14548 114 aa8.65□□□□□ -1.03
MSH6-201ENST00000234420 ZNF491Q8N8L2 437 aa8.65□□□□□ -1.03
MSH6-201ENST00000234420 MRPL53Q96EL3 112 aaKnown RBP8.65□□□□□ -1.03
MSH6-201ENST00000234420 HIGD2AQ9BW72 106 aa8.65□□□□□ -1.03
MSH6-201ENST00000234420 H3BQ85 93 aa8.65□□□□□ -1.03
MSH6-201ENST00000234420 SMIM9A6NGZ8 99 aa8.64□□□□□ -1.03
MSH6-201ENST00000234420 H3BRN7 92 aa8.64□□□□□ -1.03
MSH6-201ENST00000234420 NDUFA4L2Q9NRX3 87 aa8.64□□□□□ -1.03
MSH6-201ENST00000234420 AGRNO00468 2067 aa8.64□□□□□ -1.03
MSH6-201ENST00000234420 CRYGDP07320 174 aa8.64□□□□□ -1.03
MSH6-201ENST00000234420 PLA2G5P39877 138 aa8.64□□□□□ -1.03
MSH6-201ENST00000234420 IGLV2-11P01706 119 aa8.64□□□□□ -1.03
MSH6-201ENST00000234420 C7orf33Q8WU49 177 aa8.64□□□□□ -1.03
MSH6-201ENST00000234420 THSD7AQ9UPZ6 1657 aa8.64□□□□□ -1.03
MSH6-201ENST00000234420 RPL39P62891 51 aaKnown RBP8.64□□□□□ -1.03
MSH6-201ENST00000234420 RBX1P62877 108 aa8.64□□□□□ -1.03
MSH6-201ENST00000234420 DAZ2Q13117 558 aaKnown RBP8.64□□□□□ -1.03
MSH6-201ENST00000234420 PIK3CD-AS1Q5SR53 167 aa8.64□□□□□ -1.03
MSH6-201ENST00000234420 C16orf54Q6UWD8 224 aa8.64□□□□□ -1.03
MSH6-201ENST00000234420 DAZ4Q86SG3 579 aaKnown RBP8.64□□□□□ -1.03
MSH6-201ENST00000234420 DAZ3Q9NR90 486 aaKnown RBP8.64□□□□□ -1.03
MSH6-201ENST00000234420 NDUFA11Q86Y39 141 aa8.64□□□□□ -1.03
MSH6-201ENST00000234420 NUP210Q8TEM1 1887 aaPredicted RBP8.64□□□□□ -1.03
MSH6-201ENST00000234420 WFDC10BQ8IUB3 73 aa8.63□□□□□ -1.03
MSH6-201ENST00000234420 RIF1Q5UIP0 2472 aaKnown RBP8.63□□□□□ -1.03
MSH6-201ENST00000234420 PLA2G1BP04054 148 aaKnown RBP8.63□□□□□ -1.03
MSH6-201ENST00000234420 SOSTDC1Q6X4U4 206 aa8.62□□□□□ -1.03
MSH6-201ENST00000234420 IGHV7-4-1A0A0J9YVY3 117 aa8.62□□□□□ -1.03
MSH6-201ENST00000234420 HILS1P60008 231 aa8.62□□□□□ -1.03
MSH6-201ENST00000234420 PRR20EP86478 221 aa8.62□□□□□ -1.03
MSH6-201ENST00000234420 PRR20CP86479 221 aa8.62□□□□□ -1.03
MSH6-201ENST00000234420 PRR20DP86480 221 aa8.62□□□□□ -1.03
MSH6-201ENST00000234420 PRR20BP86481 221 aa8.62□□□□□ -1.03
MSH6-201ENST00000234420 PRR20AP86496 221 aa8.62□□□□□ -1.03
MSH6-201ENST00000234420 Q6Q795 121 aa8.62□□□□□ -1.03
MSH6-201ENST00000234420 TMEM14CQ9P0S9 112 aa8.62□□□□□ -1.03
MSH6-201ENST00000234420 IGF1P05019 195 aa8.62□□□□□ -1.03
MSH6-201ENST00000234420 C16orf74Q96GX8 76 aa8.62□□□□□ -1.03
MSH6-201ENST00000234420 C9orf85Q96MD7 179 aa8.62□□□□□ -1.03
MSH6-201ENST00000234420 ZFAND3Q9H8U3 227 aa8.62□□□□□ -1.03
MSH6-201ENST00000234420 OOSP1A8MZH6 123 aa8.62□□□□□ -1.03
MSH6-201ENST00000234420 SPG11Q96JI7 2443 aa8.62□□□□□ -1.03
MSH6-201ENST00000234420 TRBV27A0A0K0K1C4 114 aa8.62□□□□□ -1.03
MSH6-201ENST00000234420 E9PLD3 99 aa8.62□□□□□ -1.03
MSH6-201ENST00000234420 PPDPFQ9H3Y8 114 aa8.62□□□□□ -1.03
MSH6-201ENST00000234420 DNAJC9-AS1A6NH13 148 aa8.61□□□□□ -1.03
MSH6-201ENST00000234420 LRRC75A-AS1Q8N1F1 130 aa8.61□□□□□ -1.03
MSH6-201ENST00000234420 IGLV9-49A0A0B4J1Y8 123 aa8.61□□□□□ -1.03
MSH6-201ENST00000234420 DIRC1Q969H9 104 aa8.61□□□□□ -1.03
MSH6-201ENST00000234420 SIRPDQ9H106 197 aa8.61□□□□□ -1.03
MSH6-201ENST00000234420 ATP5EP56381 51 aaPredicted RBP8.61□□□□□ -1.03
MSH6-201ENST00000234420 FAM19A5Q7Z5A7 132 aaPredicted RBP8.61□□□□□ -1.03
MSH6-201ENST00000234420 MSRB1Q9NZV6 116 aa8.61□□□□□ -1.03
MSH6-201ENST00000234420 Q6ZS49 121 aa8.61□□□□□ -1.03
MSH6-201ENST00000234420 MIR7-3HGQ8N6C7 128 aa8.61□□□□□ -1.03
MSH6-201ENST00000234420 SERP2Q8N6R1 65 aa8.61□□□□□ -1.03
MSH6-201ENST00000234420 COL4A1P02462 1669 aa8.6□□□□□ -1.03
MSH6-201ENST00000234420 LY6G6DO95868 133 aa8.6□□□□□ -1.03
MSH6-201ENST00000234420 LINC00482Q8N8I6 264 aa8.6□□□□□ -1.03
MSH6-201ENST00000234420 DEFB131BA0A096LNP1 70 aa8.6□□□□□ -1.03
MSH6-201ENST00000234420 NDUFA4O00483 81 aa8.6□□□□□ -1.03
MSH6-201ENST00000234420 SMR3AQ99954 134 aa8.6□□□□□ -1.03
MSH6-201ENST00000234420 IGLV3-19P01714 112 aa8.59□□□□□ -1.03
MSH6-201ENST00000234420 K7EQD1 137 aa8.59□□□□□ -1.03
MSH6-201ENST00000234420 FGF23Q9GZV9 251 aaPredicted RBP8.59□□□□□ -1.03
MSH6-201ENST00000234420 NDUFC1O43677 76 aa8.59□□□□□ -1.03
MSH6-201ENST00000234420 VPREB1P12018 145 aa8.59□□□□□ -1.03
MSH6-201ENST00000234420 SERTAD4-AS1Q5TG53 156 aa8.59□□□□□ -1.03
MSH6-201ENST00000234420 UBE2D2P62837 147 aa8.59□□□□□ -1.03
MSH6-201ENST00000234420 SLPIP03973 132 aa8.58□□□□□ -1.04
MSH6-201ENST00000234420 C11orf86A6NJI1 115 aa8.58□□□□□ -1.04
MSH6-201ENST00000234420 PDE6GP18545 87 aa8.58□□□□□ -1.04
MSH6-201ENST00000234420 IL15RAQ13261 267 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms