RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 NDUFAF3Q9BU61 184 aa13.25□□□□□ -0.29
SNX17-201ENST00000233575 HSBP1O75506 76 aa13.24□□□□□ -0.29
SNX17-201ENST00000233575 DEFA6Q01524 100 aa13.24□□□□□ -0.29
SNX17-201ENST00000233575 IGLV2-18A0A075B6J9 118 aa13.23□□□□□ -0.29
SNX17-201ENST00000233575 TRGV2A0A075B6R0 118 aa13.23□□□□□ -0.29
SNX17-201ENST00000233575 AMTP48728 403 aa13.23□□□□□ -0.29
SNX17-201ENST00000233575 SUMO2P61956 95 aaKnown RBP13.23□□□□□ -0.29
SNX17-201ENST00000233575 FA2HQ7L5A8 372 aa13.23□□□□□ -0.29
SNX17-201ENST00000233575 CHCHD1Q96BP2 118 aaKnown RBP13.23□□□□□ -0.29
SNX17-201ENST00000233575 DEFB130BP0DP73 79 aa13.23□□□□□ -0.29
SNX17-201ENST00000233575 DEFB130AP0DP74 79 aa13.23□□□□□ -0.29
SNX17-201ENST00000233575 NEGR1Q7Z3B1 354 aa13.23□□□□□ -0.29
SNX17-201ENST00000233575 AP5S1Q9NUS5 200 aa13.23□□□□□ -0.29
SNX17-201ENST00000233575 TRAV4A0A0B4J268 109 aa13.22□□□□□ -0.29
SNX17-201ENST00000233575 RHODO00212 210 aa13.22□□□□□ -0.29
SNX17-201ENST00000233575 MIFP14174 115 aa13.22□□□□□ -0.29
SNX17-201ENST00000233575 FAM222AQ5U5X8 452 aa13.22□□□□□ -0.29
SNX17-201ENST00000233575 DEFB104AQ8WTQ1 72 aa13.22□□□□□ -0.29
SNX17-201ENST00000233575 IGHV1-24A0A0C4DH33 117 aa13.22□□□□□ -0.29
SNX17-201ENST00000233575 PRSS47A8MTI9 375 aa13.22□□□□□ -0.29
SNX17-201ENST00000233575 ZFP2Q6ZN57 461 aa13.22□□□□□ -0.29
SNX17-201ENST00000233575 SBSPONQ8IVN8 264 aa13.22□□□□□ -0.29
SNX17-201ENST00000233575 LINC00612Q8N6U2 182 aa13.21□□□□□ -0.29
SNX17-201ENST00000233575 Q8N8P6 123 aa13.21□□□□□ -0.29
SNX17-201ENST00000233575 C20orf78Q9BR46 151 aa13.21□□□□□ -0.29
SNX17-201ENST00000233575 SMIM2Q9BVW6 85 aa13.21□□□□□ -0.29
SNX17-201ENST00000233575 DEFB121Q5J5C9 76 aa13.2□□□□□ -0.3
SNX17-201ENST00000233575 CELA1Q9UNI1 258 aa13.2□□□□□ -0.3
SNX17-201ENST00000233575 TENM3Q9P273 2699 aa13.2□□□□□ -0.3
SNX17-201ENST00000233575 TCAPO15273 167 aa13.2□□□□□ -0.3
SNX17-201ENST00000233575 ST20Q9HBF5 79 aa13.2□□□□□ -0.3
SNX17-201ENST00000233575 NXT2Q9NPJ8 142 aaKnown RBP13.2□□□□□ -0.3
SNX17-201ENST00000233575 DKK2Q9UBU2 259 aa13.2□□□□□ -0.3
SNX17-201ENST00000233575 A0A096LNJ9 63 aa13.19□□□□□ -0.3
SNX17-201ENST00000233575 PPP1R17O96001 155 aa13.19□□□□□ -0.3
SNX17-201ENST00000233575 TMEM70Q9BUB7 260 aa13.19□□□□□ -0.3
SNX17-201ENST00000233575 EDA2RQ9HAV5 297 aa13.19□□□□□ -0.3
SNX17-201ENST00000233575 TP53TG1Q9Y2A0 90 aa13.19□□□□□ -0.3
SNX17-201ENST00000233575 SDHAF1A6NFY7 115 aa13.18□□□□□ -0.3
SNX17-201ENST00000233575 TRBV6-5A0A0K0K1A5 114 aa13.18□□□□□ -0.3
SNX17-201ENST00000233575 POLR2KP53803 58 aaKnown RBP13.18□□□□□ -0.3
SNX17-201ENST00000233575 MRAPQ8TCY5 172 aa13.18□□□□□ -0.3
SNX17-201ENST00000233575 HUWE1Q7Z6Z7 4374 aaKnown RBP13.17□□□□□ -0.3
SNX17-201ENST00000233575 LINC01546A6NGU7 62 aa13.17□□□□□ -0.3
SNX17-201ENST00000233575 H7C1H1 209 aa13.17□□□□□ -0.3
SNX17-201ENST00000233575 PYY3Q5JQD4 70 aa13.17□□□□□ -0.3
SNX17-201ENST00000233575 LYRM9A8MSI8 78 aa13.17□□□□□ -0.3
SNX17-201ENST00000233575 SLC25A29Q8N8R3 303 aa13.17□□□□□ -0.3
SNX17-201ENST00000233575 NEXN-AS1Q8NBZ9 246 aa13.17□□□□□ -0.3
SNX17-201ENST00000233575 C14orf144Q96I85 54 aa13.17□□□□□ -0.3
SNX17-201ENST00000233575 LINC00173Q6ZV60 143 aa13.16□□□□□ -0.3
SNX17-201ENST00000233575 FHL2Q14192 279 aa13.15□□□□□ -0.3
SNX17-201ENST00000233575 KRTAP21-3Q3LHN1 58 aa13.15□□□□□ -0.3
SNX17-201ENST00000233575 LBHQ53QV2 105 aaPredicted RBP13.15□□□□□ -0.3
SNX17-201ENST00000233575 C18orf15Q96N68 181 aa13.15□□□□□ -0.3
SNX17-201ENST00000233575 TRGV4A0A0C4DH28 118 aa13.13□□□□□ -0.31
SNX17-201ENST00000233575 TRBV27A0A0K0K1C4 114 aa13.13□□□□□ -0.31
SNX17-201ENST00000233575 A0A1B0GV90 55 aa13.13□□□□□ -0.31
SNX17-201ENST00000233575 K7EQD1 137 aa13.13□□□□□ -0.31
SNX17-201ENST00000233575 RPL32P62910 135 aaKnown RBP13.13□□□□□ -0.31
SNX17-201ENST00000233575 VCYO14598 125 aa13.13□□□□□ -0.31
SNX17-201ENST00000233575 LAGE3Q14657 143 aa13.13□□□□□ -0.31
SNX17-201ENST00000233575 TNFRSF18Q9Y5U5 241 aa13.13□□□□□ -0.31
SNX17-201ENST00000233575 LOC100131303A0A0U1RQF7 123 aa13.12□□□□□ -0.31
SNX17-201ENST00000233575 LEPROTL1O95214 131 aa13.12□□□□□ -0.31
SNX17-201ENST00000233575 HBDP02042 147 aa13.12□□□□□ -0.31
SNX17-201ENST00000233575 SPART-AS1P0CW21 52 aa13.12□□□□□ -0.31
SNX17-201ENST00000233575 DAD1P61803 113 aa13.12□□□□□ -0.31
SNX17-201ENST00000233575 JOSD1Q15040 202 aaPredicted RBP13.12□□□□□ -0.31
SNX17-201ENST00000233575 DNAH9Q9NYC9 4486 aa13.11□□□□□ -0.31
SNX17-201ENST00000233575 IGHV3-38A0A0C4DH36 116 aa13.11□□□□□ -0.31
SNX17-201ENST00000233575 ZNRF2Q8NHG8 242 aa13.11□□□□□ -0.31
SNX17-201ENST00000233575 TM2D3Q9BRN9 247 aa13.11□□□□□ -0.31
SNX17-201ENST00000233575 FCER1GP30273 86 aa13.1□□□□□ -0.31
SNX17-201ENST00000233575 PKIAP61925 76 aa13.1□□□□□ -0.31
SNX17-201ENST00000233575 PHLDA1Q8WV24 401 aaPredicted RBP13.1□□□□□ -0.31
SNX17-201ENST00000233575 CIDEAO60543 219 aa13.1□□□□□ -0.31
SNX17-201ENST00000233575 TSHBP01222 138 aa13.1□□□□□ -0.31
SNX17-201ENST00000233575 KRTDAPP60985 99 aa13.1□□□□□ -0.31
SNX17-201ENST00000233575 KIR2DL4Q99706 377 aa13.1□□□□□ -0.31
SNX17-201ENST00000233575 C2orf88Q9BSF0 95 aa13.1□□□□□ -0.31
SNX17-201ENST00000233575 A0A0J9YWU9 116 aa13.09□□□□□ -0.31
SNX17-201ENST00000233575 TRBV6-4A0A1B0GX49 114 aa13.09□□□□□ -0.31
SNX17-201ENST00000233575 GAGE12JA6NER3 117 aa13.09□□□□□ -0.31
SNX17-201ENST00000233575 I3L3M4 83 aa13.09□□□□□ -0.31
SNX17-201ENST00000233575 NUDT3O95989 172 aa13.09□□□□□ -0.31
SNX17-201ENST00000233575 C3orf79P0CE67 100 aa13.09□□□□□ -0.31
SNX17-201ENST00000233575 GAGE1Q13065 139 aa13.09□□□□□ -0.31
SNX17-201ENST00000233575 GAGE4Q13068 117 aa13.09□□□□□ -0.31
SNX17-201ENST00000233575 GAGE5Q13069 117 aa13.09□□□□□ -0.31
SNX17-201ENST00000233575 GAGE13Q4V321 117 aa13.09□□□□□ -0.31
SNX17-201ENST00000233575 CDPF1Q6NVV7 123 aa13.09□□□□□ -0.31
SNX17-201ENST00000233575 DNAJC30Q96LL9 226 aa13.09□□□□□ -0.31
SNX17-201ENST00000233575 TRBV7-3A0A075B6L6 115 aa13.08□□□□□ -0.31
SNX17-201ENST00000233575 SPATA25Q9BR10 227 aa13.08□□□□□ -0.31
SNX17-201ENST00000233575 HHLA3Q9XRX5 114 aa13.08□□□□□ -0.31
SNX17-201ENST00000233575 TRBV10-1A0A0K0K1A3 114 aa13.08□□□□□ -0.32
SNX17-201ENST00000233575 DDTP30046 118 aa13.08□□□□□ -0.32
SNX17-201ENST00000233575 ORMDL2Q53FV1 153 aa13.08□□□□□ -0.32
SNX17-201ENST00000233575 C11orf68Q9H3H3 251 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms