RNA–Protein interactions for RNA: ENST00000219548.8

STUB1-201, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STUB1, Length 1,472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-201ENST00000219548 ATRAIDQ6UW56 229 aa18.4■□□□□ 0.54
STUB1-201ENST00000219548 GATD1Q8NB37 220 aa18.4■□□□□ 0.54
STUB1-201ENST00000219548 RNF185Q96GF1 192 aa18.4■□□□□ 0.54
STUB1-201ENST00000219548 RPL36AP83881 106 aaKnown RBP18.39■□□□□ 0.54
STUB1-201ENST00000219548 RPL36ALQ969Q0 106 aaKnown RBP18.39■□□□□ 0.54
STUB1-201ENST00000219548 LINC00588Q9Y4M8 146 aa18.39■□□□□ 0.54
STUB1-201ENST00000219548 LCE6AA0A183 80 aa18.39■□□□□ 0.53
STUB1-201ENST00000219548 H7C1H1 209 aa18.39■□□□□ 0.53
STUB1-201ENST00000219548 S100A8P05109 93 aa18.39■□□□□ 0.53
STUB1-201ENST00000219548 RAB4AP20338 218 aa18.39■□□□□ 0.53
STUB1-201ENST00000219548 S100PP25815 95 aa18.39■□□□□ 0.53
STUB1-201ENST00000219548 CCL18P55774 89 aa18.39■□□□□ 0.53
STUB1-201ENST00000219548 RASL11AQ6T310 242 aa18.39■□□□□ 0.53
STUB1-201ENST00000219548 TRBV7-3A0A075B6L6 115 aa18.38■□□□□ 0.53
STUB1-201ENST00000219548 LYPD5Q6UWN5 251 aa18.38■□□□□ 0.53
STUB1-201ENST00000219548 ATP6V0E2Q8NHE4 81 aa18.38■□□□□ 0.53
STUB1-201ENST00000219548 KMT2AQ03164 3969 aa18.38■□□□□ 0.53
STUB1-201ENST00000219548 SH2D6Q7Z4S9 175 aa18.37■□□□□ 0.53
STUB1-201ENST00000219548 HYDINQ4G0P3 5121 aa18.37■□□□□ 0.53
STUB1-201ENST00000219548 GAS8-AS1O95177 125 aa18.36■□□□□ 0.53
STUB1-201ENST00000219548 FAM104BQ5XKR9 115 aa18.36■□□□□ 0.53
STUB1-201ENST00000219548 DNAH6Q9C0G6 4158 aa18.35■□□□□ 0.53
STUB1-201ENST00000219548 UBE2D3P61077 147 aa18.35■□□□□ 0.53
STUB1-201ENST00000219548 UBE2D2P62837 147 aa18.35■□□□□ 0.53
STUB1-201ENST00000219548 RPL39LQ96EH5 51 aaKnown RBP18.35■□□□□ 0.53
STUB1-201ENST00000219548 TRAV9-1A0A075B6T8 112 aa18.34■□□□□ 0.53
STUB1-201ENST00000219548 NIT2Q9NQR4 276 aa18.34■□□□□ 0.53
STUB1-201ENST00000219548 SMKR1H3BMG3 65 aa18.33■□□□□ 0.53
STUB1-201ENST00000219548 MRPL51Q4U2R6 128 aaKnown RBP18.33■□□□□ 0.53
STUB1-201ENST00000219548 TNFRSF18Q9Y5U5 241 aa18.33■□□□□ 0.53
STUB1-201ENST00000219548 IGHV3-38A0A0C4DH36 116 aa18.33■□□□□ 0.52
STUB1-201ENST00000219548 NCR2O95944 276 aa18.33■□□□□ 0.52
STUB1-201ENST00000219548 DNAJC30Q96LL9 226 aa18.33■□□□□ 0.52
STUB1-201ENST00000219548 GTSF1LQ9H1H1 148 aa18.33■□□□□ 0.52
STUB1-201ENST00000219548 RYR2Q92736 4967 aa18.32■□□□□ 0.52
STUB1-201ENST00000219548 MRAP2Q96G30 205 aa18.32■□□□□ 0.52
STUB1-201ENST00000219548 MRPS16Q9Y3D3 137 aaKnown RBP18.32■□□□□ 0.52
STUB1-201ENST00000219548 RPS10P46783 165 aaKnown RBP18.3■□□□□ 0.52
STUB1-201ENST00000219548 OR10J3Q5JRS4 329 aa18.29■□□□□ 0.52
STUB1-201ENST00000219548 FRZBQ92765 325 aa18.29■□□□□ 0.52
STUB1-201ENST00000219548 TIRAPP58753 221 aa18.28■□□□□ 0.52
STUB1-201ENST00000219548 TGIF2-C20orf24A0A0A6YYL0 155 aa18.27■□□□□ 0.52
STUB1-201ENST00000219548 ELOBQ15370 118 aa18.27■□□□□ 0.52
STUB1-201ENST00000219548 TMEM136Q6ZRR5 245 aa18.27■□□□□ 0.52
STUB1-201ENST00000219548 UPK3BQ9BT76 320 aa18.27■□□□□ 0.52
STUB1-201ENST00000219548 CBLN2Q8IUK8 224 aa18.26■□□□□ 0.51
STUB1-201ENST00000219548 CKS2P33552 79 aa18.26■□□□□ 0.51
STUB1-201ENST00000219548 DAZ4Q86SG3 579 aaKnown RBP18.26■□□□□ 0.51
STUB1-201ENST00000219548 DEFB104AQ8WTQ1 72 aa18.26■□□□□ 0.51
STUB1-201ENST00000219548 DAZ3Q9NR90 486 aaKnown RBP18.26■□□□□ 0.51
STUB1-201ENST00000219548 D6R8Y8 96 aa18.25■□□□□ 0.51
STUB1-201ENST00000219548 LELP1Q5T871 98 aa18.25■□□□□ 0.51
STUB1-201ENST00000219548 WFDC10BQ8IUB3 73 aa18.25■□□□□ 0.51
STUB1-201ENST00000219548 NRACQ8N912 160 aa18.25■□□□□ 0.51
STUB1-201ENST00000219548 IGLV2-18A0A075B6J9 118 aa18.24■□□□□ 0.51
STUB1-201ENST00000219548 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.24■□□□□ 0.51
STUB1-201ENST00000219548 RYR3Q15413 4870 aa18.24■□□□□ 0.51
STUB1-201ENST00000219548 TRBV6-5A0A0K0K1A5 114 aa18.23■□□□□ 0.51
STUB1-201ENST00000219548 Q9H8V8 135 aa18.23■□□□□ 0.51
STUB1-201ENST00000219548 SDHAF1A6NFY7 115 aa18.22■□□□□ 0.51
STUB1-201ENST00000219548 ST20Q9HBF5 79 aa18.22■□□□□ 0.51
STUB1-201ENST00000219548 YPEL4Q96NS1 127 aa18.21■□□□□ 0.51
STUB1-201ENST00000219548 SMCO4Q9NRQ5 59 aa18.21■□□□□ 0.51
STUB1-201ENST00000219548 TRBV24-1A0A075B6N3 115 aa18.2■□□□□ 0.5
STUB1-201ENST00000219548 NTM-AS1Q6ZSK4 140 aa18.2■□□□□ 0.5
STUB1-201ENST00000219548 GNB1LQ9BYB4 327 aa18.2■□□□□ 0.5
STUB1-201ENST00000219548 TRBV6-8A0A0A6YYG3 113 aa18.2■□□□□ 0.5
STUB1-201ENST00000219548 TRAV8-6A0A0B4J262 113 aa18.2■□□□□ 0.5
STUB1-201ENST00000219548 SIVA1O15304 175 aa18.2■□□□□ 0.5
STUB1-201ENST00000219548 ORMDL3Q8N138 153 aa18.2■□□□□ 0.5
STUB1-201ENST00000219548 TMEM70Q9BUB7 260 aa18.2■□□□□ 0.5
STUB1-201ENST00000219548 NPYP01303 97 aa18.19■□□□□ 0.5
STUB1-201ENST00000219548 HLA-DQA1P01909 254 aa18.19■□□□□ 0.5
STUB1-201ENST00000219548 TNFRSF6BO95407 300 aa18.18■□□□□ 0.5
STUB1-201ENST00000219548 PPP1R17O96001 155 aa18.18■□□□□ 0.5
STUB1-201ENST00000219548 PPBPP02775 128 aa18.18■□□□□ 0.5
STUB1-201ENST00000219548 PRELID3AQ96N28 172 aa18.18■□□□□ 0.5
STUB1-201ENST00000219548 M0R2N4 97 aa18.17■□□□□ 0.5
STUB1-201ENST00000219548 SUMO2P61956 95 aaKnown RBP18.17■□□□□ 0.5
STUB1-201ENST00000219548 KIAA1644Q3SXP7 199 aa18.17■□□□□ 0.5
STUB1-201ENST00000219548 COX19Q49B96 90 aa18.17■□□□□ 0.5
STUB1-201ENST00000219548 APCSP02743 223 aa18.16■□□□□ 0.5
STUB1-201ENST00000219548 POLR2KP53803 58 aaKnown RBP18.16■□□□□ 0.5
STUB1-201ENST00000219548 ATP6V1G1O75348 118 aa18.15■□□□□ 0.5
STUB1-201ENST00000219548 COTL1Q14019 142 aa18.15■□□□□ 0.5
STUB1-201ENST00000219548 TMEM97Q5BJF2 176 aa18.15■□□□□ 0.5
STUB1-201ENST00000219548 SCO1O75880 301 aa18.14■□□□□ 0.5
STUB1-201ENST00000219548 PMCHP20382 165 aa18.14■□□□□ 0.5
STUB1-201ENST00000219548 MRPL18Q9H0U6 180 aaKnown RBP18.14■□□□□ 0.5
STUB1-201ENST00000219548 I3L3M4 83 aa18.14■□□□□ 0.49
STUB1-201ENST00000219548 MT-ND6P03923 174 aa18.14■□□□□ 0.49
STUB1-201ENST00000219548 Q8N3U1 123 aa18.14■□□□□ 0.49
STUB1-201ENST00000219548 TRBV25-1A0A075B6N4 114 aa18.13■□□□□ 0.49
STUB1-201ENST00000219548 IGHV1-24A0A0C4DH33 117 aa18.13■□□□□ 0.49
STUB1-201ENST00000219548 TRBV27A0A0K0K1C4 114 aa18.13■□□□□ 0.49
STUB1-201ENST00000219548 NBDYA0A0U1RRE5 68 aa18.13■□□□□ 0.49
STUB1-201ENST00000219548 C20orf78Q9BR46 151 aa18.13■□□□□ 0.49
STUB1-201ENST00000219548 DNAH2Q9P225 4427 aa18.12■□□□□ 0.49
STUB1-201ENST00000219548 DNAH10OSP0CZ25 163 aa18.12■□□□□ 0.49
STUB1-201ENST00000219548 IQCJQ1A5X6 159 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms