RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 MAPK1IP1LQ8NDC0 245 aa12.8□□□□□ -0.36
USB1-201ENST00000219281 SPATA25Q9BR10 227 aa12.8□□□□□ -0.36
USB1-201ENST00000219281 KRTAP10-9P60411 292 aa12.79□□□□□ -0.36
USB1-201ENST00000219281 SNRPD3P62318 126 aaKnown RBP12.79□□□□□ -0.36
USB1-201ENST00000219281 SPINK13Q1W4C9 94 aa12.79□□□□□ -0.36
USB1-201ENST00000219281 IGHV3-30P01768 117 aa12.79□□□□□ -0.36
USB1-201ENST00000219281 IGHV3-30-5P0DP03 117 aa12.79□□□□□ -0.36
USB1-201ENST00000219281 ODF3Q96PU9 254 aa12.79□□□□□ -0.36
USB1-201ENST00000219281 IGHV1OR15-1A0A075B7D0 117 aa12.78□□□□□ -0.36
USB1-201ENST00000219281 J3QQQ9 107 aa12.78□□□□□ -0.36
USB1-201ENST00000219281 IGHV4-59P01825 116 aa12.78□□□□□ -0.36
USB1-201ENST00000219281 UBE2D3P61077 147 aa12.78□□□□□ -0.36
USB1-201ENST00000219281 UBE2D2P62837 147 aa12.78□□□□□ -0.36
USB1-201ENST00000219281 SLC25A29Q8N8R3 303 aa12.78□□□□□ -0.36
USB1-201ENST00000219281 CFC1BP0CG36 223 aa12.78□□□□□ -0.36
USB1-201ENST00000219281 CFC1P0CG37 223 aa12.78□□□□□ -0.36
USB1-201ENST00000219281 K7EQG2 157 aa12.77□□□□□ -0.36
USB1-201ENST00000219281 LGALS3P17931 250 aaKnown RBP12.77□□□□□ -0.36
USB1-201ENST00000219281 GATA3P23771 443 aa12.77□□□□□ -0.36
USB1-201ENST00000219281 TRPT1Q86TN4 253 aaKnown RBP12.77□□□□□ -0.36
USB1-201ENST00000219281 AMELXQ99217 191 aa12.77□□□□□ -0.36
USB1-201ENST00000219281 P0DMU3 169 aa12.77□□□□□ -0.37
USB1-201ENST00000219281 FAM231AP0DMU4 169 aa12.77□□□□□ -0.37
USB1-201ENST00000219281 FAM231CP0DMU5 169 aa12.77□□□□□ -0.37
USB1-201ENST00000219281 NSUN5P1Q3KNT7 163 aa12.77□□□□□ -0.37
USB1-201ENST00000219281 LINC01356Q8N9X3 169 aa12.77□□□□□ -0.37
USB1-201ENST00000219281 ZNF418Q8TF45 676 aaPredicted RBP12.77□□□□□ -0.37
USB1-201ENST00000219281 ABCA12Q86UK0 2595 aa12.76□□□□□ -0.37
USB1-201ENST00000219281 FOXI1Q12951 378 aa12.76□□□□□ -0.37
USB1-201ENST00000219281 RHOHQ15669 191 aa12.76□□□□□ -0.37
USB1-201ENST00000219281 DEFB112Q30KQ8 113 aa12.76□□□□□ -0.37
USB1-201ENST00000219281 C1QTNF4Q9BXJ3 329 aa12.76□□□□□ -0.37
USB1-201ENST00000219281 ZNF580Q9UK33 172 aa12.76□□□□□ -0.37
USB1-201ENST00000219281 SCGB1A1P11684 91 aa12.76□□□□□ -0.37
USB1-201ENST00000219281 SYNJ2BPP57105 145 aa12.76□□□□□ -0.37
USB1-201ENST00000219281 NFE4Q86UQ8 179 aa12.76□□□□□ -0.37
USB1-201ENST00000219281 DUX5Q96PT3 197 aa12.75□□□□□ -0.37
USB1-201ENST00000219281 IGHV3-64A0A075B6Q5 118 aa12.74□□□□□ -0.37
USB1-201ENST00000219281 TCL1BO95988 128 aa12.74□□□□□ -0.37
USB1-201ENST00000219281 TMEM223A0PJW6 202 aa12.74□□□□□ -0.37
USB1-201ENST00000219281 TGFAP01135 160 aa12.74□□□□□ -0.37
USB1-201ENST00000219281 PTH2Q96A98 100 aa12.74□□□□□ -0.37
USB1-201ENST00000219281 I3L3M4 83 aa12.73□□□□□ -0.37
USB1-201ENST00000219281 LYRM7Q5U5X0 104 aa12.73□□□□□ -0.37
USB1-201ENST00000219281 C20orf203Q8NBC4 194 aa12.73□□□□□ -0.37
USB1-201ENST00000219281 ATP6V0E2Q8NHE4 81 aa12.73□□□□□ -0.37
USB1-201ENST00000219281 NBPF19A0A087WUL8 3843 aa12.73□□□□□ -0.37
USB1-201ENST00000219281 LEPROTO15243 131 aa12.73□□□□□ -0.37
USB1-201ENST00000219281 C10orf126Q8N4M7 172 aa12.73□□□□□ -0.37
USB1-201ENST00000219281 NAV2Q8IVL1 2488 aa12.73□□□□□ -0.37
USB1-201ENST00000219281 ZNF469Q96JG9 3925 aaPredicted RBP12.73□□□□□ -0.37
USB1-201ENST00000219281 PRO1854Q9UHT4 67 aa12.72□□□□□ -0.37
USB1-201ENST00000219281 ZNF22P17026 224 aaPredicted RBP12.72□□□□□ -0.37
USB1-201ENST00000219281 A0A0J9YXV3 536 aa12.71□□□□□ -0.37
USB1-201ENST00000219281 RHODO00212 210 aa12.71□□□□□ -0.37
USB1-201ENST00000219281 SCGB1C2P0DMR2 95 aa12.71□□□□□ -0.37
USB1-201ENST00000219281 MXRA5Q9NR99 2828 aa12.71□□□□□ -0.38
USB1-201ENST00000219281 IGLV4-3A0A075B6K6 122 aa12.71□□□□□ -0.38
USB1-201ENST00000219281 IGHV3-73A0A0B4J1V6 119 aa12.71□□□□□ -0.38
USB1-201ENST00000219281 HTN1P15515 57 aa12.71□□□□□ -0.38
USB1-201ENST00000219281 VCX2Q9H322 139 aa12.71□□□□□ -0.38
USB1-201ENST00000219281 A4D1N5 150 aa12.7□□□□□ -0.38
USB1-201ENST00000219281 TRGV11A0A075B6L2 103 aa12.69□□□□□ -0.38
USB1-201ENST00000219281 TRBV20-1A0A075B6N2 111 aa12.69□□□□□ -0.38
USB1-201ENST00000219281 TRAV2A0A0B4J234 112 aa12.69□□□□□ -0.38
USB1-201ENST00000219281 TMEM89A2RUT3 159 aa12.69□□□□□ -0.38
USB1-201ENST00000219281 RAX2Q96IS3 184 aa12.69□□□□□ -0.38
USB1-201ENST00000219281 RBMY1A1P0DJD3 496 aaKnown RBP12.69□□□□□ -0.38
USB1-201ENST00000219281 RBMY1CP0DJD4 496 aa12.69□□□□□ -0.38
USB1-201ENST00000219281 RBMY1FQ15415 496 aaKnown RBP12.69□□□□□ -0.38
USB1-201ENST00000219281 J3QLI3 93 aa12.68□□□□□ -0.38
USB1-201ENST00000219281 EIF4EBP3O60516 100 aaPredicted RBP12.68□□□□□ -0.38
USB1-201ENST00000219281 IGHV4-31P0DP07 118 aa12.68□□□□□ -0.38
USB1-201ENST00000219281 HOXD3P31249 432 aaPredicted RBP12.68□□□□□ -0.38
USB1-201ENST00000219281 PROK1P58294 105 aa12.68□□□□□ -0.38
USB1-201ENST00000219281 KNCNA6PVL3 124 aa12.68□□□□□ -0.38
USB1-201ENST00000219281 MUSTN1Q8IVN3 82 aa12.68□□□□□ -0.38
USB1-201ENST00000219281 CARD19Q96LW7 228 aa12.68□□□□□ -0.38
USB1-201ENST00000219281 APCP25054 2843 aa12.67□□□□□ -0.38
USB1-201ENST00000219281 TEX15Q9BXT5 2789 aa12.67□□□□□ -0.38
USB1-201ENST00000219281 CDIP1Q9H305 208 aa12.67□□□□□ -0.38
USB1-201ENST00000219281 DEFB113Q30KQ7 82 aa12.67□□□□□ -0.38
USB1-201ENST00000219281 TEN1Q86WV5 123 aa12.67□□□□□ -0.38
USB1-201ENST00000219281 CR1P17927 2039 aa12.66□□□□□ -0.38
USB1-201ENST00000219281 FSHBP01225 129 aa12.66□□□□□ -0.38
USB1-201ENST00000219281 SPXQ9BT56 116 aa12.66□□□□□ -0.38
USB1-201ENST00000219281 DOPEY2Q9Y3R5 2298 aa12.65□□□□□ -0.38
USB1-201ENST00000219281 A8MWV9 139 aa12.65□□□□□ -0.38
USB1-201ENST00000219281 H7C2G1 150 aa12.65□□□□□ -0.38
USB1-201ENST00000219281 PRM2P04554 102 aa12.65□□□□□ -0.38
USB1-201ENST00000219281 CD28P10747 220 aa12.65□□□□□ -0.38
USB1-201ENST00000219281 FHL3Q13643 280 aa12.65□□□□□ -0.38
USB1-201ENST00000219281 TCTEX1D4Q5JR98 221 aa12.65□□□□□ -0.38
USB1-201ENST00000219281 TMEM263Q8WUH6 116 aaKnown RBP12.65□□□□□ -0.38
USB1-201ENST00000219281 PPDPFLQ8WWR9 84 aa12.65□□□□□ -0.38
USB1-201ENST00000219281 IGHV3-33P01772 117 aa12.65□□□□□ -0.38
USB1-201ENST00000219281 CEMP1Q6PRD7 247 aaPredicted RBP12.65□□□□□ -0.38
USB1-201ENST00000219281 SBSPONQ8IVN8 264 aa12.65□□□□□ -0.38
USB1-201ENST00000219281 RNF152Q8N8N0 203 aa12.65□□□□□ -0.38
USB1-201ENST00000219281 ADARB2-AS1A8MUL3 147 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms