RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 NFE4Q86UQ8 179 aa10.18□□□□□ -0.78
UPK3A-201ENST00000216211 HIST1H2BHQ93079 126 aa10.18□□□□□ -0.78
UPK3A-201ENST00000216211 HIST1H2BNQ99877 126 aa10.18□□□□□ -0.78
UPK3A-201ENST00000216211 HIST1H2BMQ99879 126 aa10.18□□□□□ -0.78
UPK3A-201ENST00000216211 TRAV9-2A0A087WT02 112 aa10.17□□□□□ -0.78
UPK3A-201ENST00000216211 TRAV4A0A0B4J268 109 aa10.17□□□□□ -0.78
UPK3A-201ENST00000216211 IGHV3-16A0A0C4DH30 117 aa10.17□□□□□ -0.78
UPK3A-201ENST00000216211 LOC100131303A0A0U1RQF7 123 aa10.17□□□□□ -0.78
UPK3A-201ENST00000216211 XKRY2A2RUG3 117 aa10.17□□□□□ -0.78
UPK3A-201ENST00000216211 C5orf52A6NGY3 159 aa10.17□□□□□ -0.78
UPK3A-201ENST00000216211 ORM1P02763 201 aa10.17□□□□□ -0.78
UPK3A-201ENST00000216211 TMEM136Q6ZRR5 245 aa10.17□□□□□ -0.78
UPK3A-201ENST00000216211 OR4C5Q8NGB2 326 aa10.17□□□□□ -0.78
UPK3A-201ENST00000216211 PGPEP1Q9NXJ5 209 aa10.17□□□□□ -0.78
UPK3A-201ENST00000216211 TRAV21A0A0B4J279 112 aa10.16□□□□□ -0.78
UPK3A-201ENST00000216211 A0A1B0GXF2 115 aa10.16□□□□□ -0.78
UPK3A-201ENST00000216211 M0R2P5 195 aa10.16□□□□□ -0.78
UPK3A-201ENST00000216211 MRPL54Q6P161 138 aaKnown RBP10.16□□□□□ -0.78
UPK3A-201ENST00000216211 MSRB1Q9NZV6 116 aa10.16□□□□□ -0.78
UPK3A-201ENST00000216211 A0A087WTM6 91 aa10.15□□□□□ -0.78
UPK3A-201ENST00000216211 HLA-DQA1P01909 254 aa10.15□□□□□ -0.78
UPK3A-201ENST00000216211 GZMBP10144 247 aa10.15□□□□□ -0.78
UPK3A-201ENST00000216211 EVI2AP22794 236 aa10.15□□□□□ -0.78
UPK3A-201ENST00000216211 NDUFA6P56556 154 aa10.15□□□□□ -0.78
UPK3A-201ENST00000216211 SNRPEP62304 92 aaKnown RBP10.15□□□□□ -0.78
UPK3A-201ENST00000216211 LINC01559Q495D7 138 aa10.15□□□□□ -0.78
UPK3A-201ENST00000216211 PGLYRP4Q96LB8 373 aa10.15□□□□□ -0.78
UPK3A-201ENST00000216211 MRPL18Q9H0U6 180 aaKnown RBP10.15□□□□□ -0.78
UPK3A-201ENST00000216211 CDPF1Q6NVV7 123 aa10.14□□□□□ -0.79
UPK3A-201ENST00000216211 A0A1B0GW15 77 aa10.13□□□□□ -0.79
UPK3A-201ENST00000216211 HBBP68871 147 aa10.13□□□□□ -0.79
UPK3A-201ENST00000216211 RIGQ13278 110 aa10.13□□□□□ -0.79
UPK3A-201ENST00000216211 COA6Q5JTJ3 125 aaKnown RBP10.13□□□□□ -0.79
UPK3A-201ENST00000216211 GATD1Q8NB37 220 aa10.13□□□□□ -0.79
UPK3A-201ENST00000216211 KCNS1Q96KK3 526 aa10.13□□□□□ -0.79
UPK3A-201ENST00000216211 A0A1B0GUT8 65 aa10.12□□□□□ -0.79
UPK3A-201ENST00000216211 EPM2AB3EWF7 344 aa10.12□□□□□ -0.79
UPK3A-201ENST00000216211 K7EP13 123 aa10.12□□□□□ -0.79
UPK3A-201ENST00000216211 CRYGDP07320 174 aa10.12□□□□□ -0.79
UPK3A-201ENST00000216211 IGLC6P0CF74 106 aa10.12□□□□□ -0.79
UPK3A-201ENST00000216211 GATA1P15976 413 aaPredicted RBP10.12□□□□□ -0.79
UPK3A-201ENST00000216211 XGP55808 180 aa10.12□□□□□ -0.79
UPK3A-201ENST00000216211 FAT1Q14517 4588 aa10.11□□□□□ -0.79
UPK3A-201ENST00000216211 IGKV3D-20A0A0C4DH25 116 aa10.11□□□□□ -0.79
UPK3A-201ENST00000216211 APCSP02743 223 aa10.11□□□□□ -0.79
UPK3A-201ENST00000216211 S100A8P05109 93 aa10.11□□□□□ -0.79
UPK3A-201ENST00000216211 CTRLP40313 264 aa10.11□□□□□ -0.79
UPK3A-201ENST00000216211 KRTAP10-1P60331 282 aa10.11□□□□□ -0.79
UPK3A-201ENST00000216211 RAB4BP61018 213 aa10.11□□□□□ -0.79
UPK3A-201ENST00000216211 BORCS7Q96B45 105 aa10.11□□□□□ -0.79
UPK3A-201ENST00000216211 C11orf21Q9P2W6 132 aa10.11□□□□□ -0.79
UPK3A-201ENST00000216211 TMSB15BA0A087X1C1 80 aa10.1□□□□□ -0.79
UPK3A-201ENST00000216211 LYZL1Q6UWQ5 148 aa10.1□□□□□ -0.79
UPK3A-201ENST00000216211 SH2D6Q7Z4S9 175 aa10.1□□□□□ -0.79
UPK3A-201ENST00000216211 C10orf126Q8N4M7 172 aa10.1□□□□□ -0.79
UPK3A-201ENST00000216211 FER1L6-AS1Q8NA97 138 aa10.1□□□□□ -0.79
UPK3A-201ENST00000216211 HERC1Q15751 4861 aa10.1□□□□□ -0.79
UPK3A-201ENST00000216211 IGHV3-73A0A0B4J1V6 119 aa10.09□□□□□ -0.79
UPK3A-201ENST00000216211 F2Z2F3 143 aa10.09□□□□□ -0.79
UPK3A-201ENST00000216211 RS1O15537 224 aa10.09□□□□□ -0.79
UPK3A-201ENST00000216211 ARMS2P0C7Q2 107 aa10.09□□□□□ -0.79
UPK3A-201ENST00000216211 CAMPP49913 170 aa10.09□□□□□ -0.79
UPK3A-201ENST00000216211 ZNF876PQ49A33 203 aa10.09□□□□□ -0.79
UPK3A-201ENST00000216211 CFAP126Q5VTH2 177 aa10.09□□□□□ -0.79
UPK3A-201ENST00000216211 SLC25A29Q8N8R3 303 aa10.09□□□□□ -0.79
UPK3A-201ENST00000216211 DNAH8Q96JB1 4490 aa10.08□□□□□ -0.8
UPK3A-201ENST00000216211 IGHV3-38A0A0C4DH36 116 aa10.08□□□□□ -0.8
UPK3A-201ENST00000216211 TIRAPP58753 221 aa10.08□□□□□ -0.8
UPK3A-201ENST00000216211 Q0VG73 95 aa10.08□□□□□ -0.8
UPK3A-201ENST00000216211 CNFNQ9BYD5 112 aa10.08□□□□□ -0.8
UPK3A-201ENST00000216211 GRIFINA4D1Z8 144 aa10.07□□□□□ -0.8
UPK3A-201ENST00000216211 PSCAO43653 123 aa10.07□□□□□ -0.8
UPK3A-201ENST00000216211 GCSHP23434 173 aa10.07□□□□□ -0.8
UPK3A-201ENST00000216211 LINC01556Q5JQF7 62 aa10.07□□□□□ -0.8
UPK3A-201ENST00000216211 DNLZQ5SXM8 178 aa10.07□□□□□ -0.8
UPK3A-201ENST00000216211 HIST3H2BBQ8N257 126 aa10.07□□□□□ -0.8
UPK3A-201ENST00000216211 C9orf85Q96MD7 179 aa10.07□□□□□ -0.8
UPK3A-201ENST00000216211 PRADC1Q9BSG0 188 aa10.07□□□□□ -0.8
UPK3A-201ENST00000216211 SSBP4Q9BWG4 385 aaPredicted RBP10.07□□□□□ -0.8
UPK3A-201ENST00000216211 TRAV8-6A0A0B4J262 113 aa10.06□□□□□ -0.8
UPK3A-201ENST00000216211 RHOHQ15669 191 aa10.06□□□□□ -0.8
UPK3A-201ENST00000216211 KIAA1644Q3SXP7 199 aa10.06□□□□□ -0.8
UPK3A-201ENST00000216211 OR10J3Q5JRS4 329 aa10.06□□□□□ -0.8
UPK3A-201ENST00000216211 Q5VSD8 79 aa10.06□□□□□ -0.8
UPK3A-201ENST00000216211 TPPP3Q9BW30 176 aa10.06□□□□□ -0.8
UPK3A-201ENST00000216211 TRBV6-4A0A1B0GX49 114 aa10.05□□□□□ -0.8
UPK3A-201ENST00000216211 LRCOL1A6NCL2 159 aa10.05□□□□□ -0.8
UPK3A-201ENST00000216211 IBA57-AS1B1ANH7 110 aa10.05□□□□□ -0.8
UPK3A-201ENST00000216211 SNAI2O43623 268 aa10.05□□□□□ -0.8
UPK3A-201ENST00000216211 CIDEAO60543 219 aa10.05□□□□□ -0.8
UPK3A-201ENST00000216211 IGHV3-30P01768 117 aa10.05□□□□□ -0.8
UPK3A-201ENST00000216211 IGHV3-33P01772 117 aa10.05□□□□□ -0.8
UPK3A-201ENST00000216211 OR5AL1P0C617 328 aa10.05□□□□□ -0.8
UPK3A-201ENST00000216211 INAFM2P0DMQ5 153 aa10.05□□□□□ -0.8
UPK3A-201ENST00000216211 IGHV3-30-3P0DP02 117 aa10.05□□□□□ -0.8
UPK3A-201ENST00000216211 IGHV3-30-5P0DP03 117 aa10.05□□□□□ -0.8
UPK3A-201ENST00000216211 RNASE3P12724 160 aaKnown RBP10.05□□□□□ -0.8
UPK3A-201ENST00000216211 Q9HAA7 133 aa10.05□□□□□ -0.8
UPK3A-201ENST00000216211 IFITM10A6NMD0 228 aa10.04□□□□□ -0.8
UPK3A-201ENST00000216211 SMR3BP02814 79 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms