RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 SMCR5Q8TEV8 140 aa11.13□□□□□ -0.63
TMEM38A-201ENST00000187762 ACYP1P07311 99 aa11.13□□□□□ -0.63
TMEM38A-201ENST00000187762 RPL39P62891 51 aaKnown RBP11.13□□□□□ -0.63
TMEM38A-201ENST00000187762 TMEM141Q96I45 108 aa11.13□□□□□ -0.63
TMEM38A-201ENST00000187762 ZNF256Q9Y2P7 627 aaPredicted RBP11.13□□□□□ -0.63
TMEM38A-201ENST00000187762 DEFB104AQ8WTQ1 72 aa11.12□□□□□ -0.63
TMEM38A-201ENST00000187762 LST1O00453 97 aa11.12□□□□□ -0.63
TMEM38A-201ENST00000187762 COX6CP09669 75 aa11.12□□□□□ -0.63
TMEM38A-201ENST00000187762 KLRB1Q12918 225 aa11.12□□□□□ -0.63
TMEM38A-201ENST00000187762 ECSCRQ19T08 205 aa11.12□□□□□ -0.63
TMEM38A-201ENST00000187762 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.12□□□□□ -0.63
TMEM38A-201ENST00000187762 GPHB5Q86YW7 130 aa11.12□□□□□ -0.63
TMEM38A-201ENST00000187762 SPANXCQ9NY87 97 aa11.12□□□□□ -0.63
TMEM38A-201ENST00000187762 CRYGAP11844 174 aa11.11□□□□□ -0.63
TMEM38A-201ENST00000187762 LINC00643Q86TS7 51 aa11.11□□□□□ -0.63
TMEM38A-201ENST00000187762 Q8N9W7 124 aa11.11□□□□□ -0.63
TMEM38A-201ENST00000187762 TIMM17AQ99595 171 aa11.11□□□□□ -0.63
TMEM38A-201ENST00000187762 HIVEP3Q5T1R4 2406 aa11.11□□□□□ -0.63
TMEM38A-201ENST00000187762 EEF1AKMT3Q96AZ1 226 aa11.11□□□□□ -0.63
TMEM38A-201ENST00000187762 IGHV3-64A0A075B6Q5 118 aa11.1□□□□□ -0.63
TMEM38A-201ENST00000187762 IGHV3-66A0A0C4DH42 116 aa11.1□□□□□ -0.63
TMEM38A-201ENST00000187762 C2orf48Q96LS8 159 aa11.1□□□□□ -0.63
TMEM38A-201ENST00000187762 PPP1R17O96001 155 aa11.1□□□□□ -0.63
TMEM38A-201ENST00000187762 SIRPDQ9H106 197 aa11.1□□□□□ -0.63
TMEM38A-201ENST00000187762 IGHV3OR16-13A0A075B7E8 117 aa11.09□□□□□ -0.63
TMEM38A-201ENST00000187762 IGHV3-74A0A0B4J1X5 117 aa11.09□□□□□ -0.63
TMEM38A-201ENST00000187762 C15orf32Q32M92 178 aa11.09□□□□□ -0.63
TMEM38A-201ENST00000187762 PRR9Q5T870 116 aa11.09□□□□□ -0.63
TMEM38A-201ENST00000187762 A0A0J9YXY3 114 aa11.09□□□□□ -0.63
TMEM38A-201ENST00000187762 SDHAF1A6NFY7 115 aa11.09□□□□□ -0.63
TMEM38A-201ENST00000187762 A0A0J9YX75 114 aa11.08□□□□□ -0.64
TMEM38A-201ENST00000187762 MINOS1Q5TGZ0 78 aa11.08□□□□□ -0.64
TMEM38A-201ENST00000187762 MINOS1-NBL1R4GNA1 71 aa11.08□□□□□ -0.64
TMEM38A-201ENST00000187762 CELSR1Q9NYQ6 3014 aa11.08□□□□□ -0.64
TMEM38A-201ENST00000187762 VPS13CQ709C8 3753 aa11.08□□□□□ -0.64
TMEM38A-201ENST00000187762 TRAV8-3A0A0A6YYJ7 113 aa11.08□□□□□ -0.64
TMEM38A-201ENST00000187762 TRAV41A0A0B4J266 112 aa11.08□□□□□ -0.64
TMEM38A-201ENST00000187762 OVOL1O14753 267 aa11.08□□□□□ -0.64
TMEM38A-201ENST00000187762 ATP6V0E1O15342 81 aa11.08□□□□□ -0.64
TMEM38A-201ENST00000187762 hADV29S1A0JD25 119 aa11.07□□□□□ -0.64
TMEM38A-201ENST00000187762 G3V318 75 aa11.07□□□□□ -0.64
TMEM38A-201ENST00000187762 PHLDA3Q9Y5J5 127 aa11.07□□□□□ -0.64
TMEM38A-201ENST00000187762 SPTBN4Q9H254 2564 aa11.07□□□□□ -0.64
TMEM38A-201ENST00000187762 IGHV3-49A0A0A0MS15 119 aa11.07□□□□□ -0.64
TMEM38A-201ENST00000187762 F5H768 121 aa11.07□□□□□ -0.64
TMEM38A-201ENST00000187762 S100A4P26447 101 aaKnown RBP11.07□□□□□ -0.64
TMEM38A-201ENST00000187762 Q6ZSV7 163 aa11.07□□□□□ -0.64
TMEM38A-201ENST00000187762 C5orf38Q86SI9 138 aa11.07□□□□□ -0.64
TMEM38A-201ENST00000187762 CITED2Q99967 270 aaPredicted RBP11.07□□□□□ -0.64
TMEM38A-201ENST00000187762 C9orf47Q6ZRZ4 202 aa11.06□□□□□ -0.64
TMEM38A-201ENST00000187762 LITAFQ99732 161 aa11.06□□□□□ -0.64
TMEM38A-201ENST00000187762 I3L3M4 83 aa11.06□□□□□ -0.64
TMEM38A-201ENST00000187762 SAA4P35542 130 aa11.06□□□□□ -0.64
TMEM38A-201ENST00000187762 CXCL5P42830 114 aa11.06□□□□□ -0.64
TMEM38A-201ENST00000187762 CYSTM1Q9H1C7 97 aa11.06□□□□□ -0.64
TMEM38A-201ENST00000187762 ZFAND3Q9H8U3 227 aa11.06□□□□□ -0.64
TMEM38A-201ENST00000187762 BUB3O43684 328 aa11.05□□□□□ -0.64
TMEM38A-201ENST00000187762 PRSS2P07478 247 aa11.05□□□□□ -0.64
TMEM38A-201ENST00000187762 FAM110DQ8TAY7 271 aaPredicted RBP11.05□□□□□ -0.64
TMEM38A-201ENST00000187762 ZNF580Q9UK33 172 aa11.05□□□□□ -0.64
TMEM38A-201ENST00000187762 POLR2KP53803 58 aaKnown RBP11.05□□□□□ -0.64
TMEM38A-201ENST00000187762 CLEC19AQ6UXS0 136 aa11.05□□□□□ -0.64
TMEM38A-201ENST00000187762 KIR2DL5BQ8NHK3 375 aa11.05□□□□□ -0.64
TMEM38A-201ENST00000187762 DCANP1Q8TF63 244 aa11.05□□□□□ -0.64
TMEM38A-201ENST00000187762 DPH3Q96FX2 82 aa11.05□□□□□ -0.64
TMEM38A-201ENST00000187762 NCOR2Q9Y618 2525 aa11.05□□□□□ -0.64
TMEM38A-201ENST00000187762 TRACP01848 142 aa11.05□□□□□ -0.64
TMEM38A-201ENST00000187762 IGF1P05019 195 aa11.05□□□□□ -0.64
TMEM38A-201ENST00000187762 CCDC140Q96MF4 163 aa11.05□□□□□ -0.64
TMEM38A-201ENST00000187762 CHD8Q9HCK8 2581 aa11.04□□□□□ -0.64
TMEM38A-201ENST00000187762 ADARB2-AS1A8MUL3 147 aa11.04□□□□□ -0.64
TMEM38A-201ENST00000187762 SDIM1Q6ZPB5 146 aa11.04□□□□□ -0.64
TMEM38A-201ENST00000187762 OPRPNQ99935 248 aaPredicted RBP11.04□□□□□ -0.64
TMEM38A-201ENST00000187762 BPESC1Q9GZL8 116 aa11.04□□□□□ -0.64
TMEM38A-201ENST00000187762 CLPSL1A2RUU4 121 aa11.03□□□□□ -0.64
TMEM38A-201ENST00000187762 UCNP55089 124 aa11.03□□□□□ -0.64
TMEM38A-201ENST00000187762 C4orf26Q17RF5 130 aa11.03□□□□□ -0.64
TMEM38A-201ENST00000187762 MRPL53Q96EL3 112 aaKnown RBP11.03□□□□□ -0.64
TMEM38A-201ENST00000187762 DUX5Q96PT3 197 aa11.03□□□□□ -0.64
TMEM38A-201ENST00000187762 IGHV4OR15-8A0A075B7B6 117 aa11.03□□□□□ -0.64
TMEM38A-201ENST00000187762 IGHV3OR16-10A0A075B7F0 116 aa11.03□□□□□ -0.64
TMEM38A-201ENST00000187762 A0A087WW49 117 aa11.03□□□□□ -0.64
TMEM38A-201ENST00000187762 VCYO14598 125 aa11.03□□□□□ -0.64
TMEM38A-201ENST00000187762 OXTP01178 125 aa11.03□□□□□ -0.64
TMEM38A-201ENST00000187762 ATOX1O00244 68 aa11.02□□□□□ -0.65
TMEM38A-201ENST00000187762 HIST1H4AP62805 103 aaKnown RBP11.02□□□□□ -0.65
TMEM38A-201ENST00000187762 ADAMTSL4-AS1Q5T5F5 129 aa11.02□□□□□ -0.65
TMEM38A-201ENST00000187762 TMEM258P61165 79 aa11.02□□□□□ -0.65
TMEM38A-201ENST00000187762 ABCA2Q9BZC7 2435 aa11.01□□□□□ -0.65
TMEM38A-201ENST00000187762 LINC00315P59091 139 aa11.01□□□□□ -0.65
TMEM38A-201ENST00000187762 TRBV7-1A0A0A6YYK4 115 aa11.01□□□□□ -0.65
TMEM38A-201ENST00000187762 IGHV1-69P01742 117 aa11.01□□□□□ -0.65
TMEM38A-201ENST00000187762 LMO4P61968 165 aa11.01□□□□□ -0.65
TMEM38A-201ENST00000187762 HRCT1Q6UXD1 115 aa11.01□□□□□ -0.65
TMEM38A-201ENST00000187762 TIMM21Q9BVV7 248 aa11.01□□□□□ -0.65
TMEM38A-201ENST00000187762 A0A0J9YXV3 536 aa11□□□□□ -0.65
TMEM38A-201ENST00000187762 NPC2P61916 151 aa11□□□□□ -0.65
TMEM38A-201ENST00000187762 RHOHQ15669 191 aa11□□□□□ -0.65
TMEM38A-201ENST00000187762 TMEM61Q8N0U2 210 aa11□□□□□ -0.65
TMEM38A-201ENST00000187762 PEMTQ9UBM1 199 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms