RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 DHRS4-AS1Q9P1J3 65 aa4.74□□□□□ -1.65
VPS13D-201ENST00000011700 TEX22C9J3V5 150 aa4.74□□□□□ -1.65
VPS13D-201ENST00000011700 E7EQL1 145 aa4.74□□□□□ -1.65
VPS13D-201ENST00000011700 CLPSP04118 112 aa4.74□□□□□ -1.65
VPS13D-201ENST00000011700 XCL1P47992 114 aa4.74□□□□□ -1.65
VPS13D-201ENST00000011700 Q6Q795 121 aa4.74□□□□□ -1.65
VPS13D-201ENST00000011700 IGLV11-55A0A075B6I3 123 aa4.74□□□□□ -1.65
VPS13D-201ENST00000011700 IGKV2D-24A0A075B6R9 120 aa4.74□□□□□ -1.65
VPS13D-201ENST00000011700 SMKR1H3BMG3 65 aa4.74□□□□□ -1.65
VPS13D-201ENST00000011700 SPINK2P20155 84 aa4.74□□□□□ -1.65
VPS13D-201ENST00000011700 NDUFA11Q86Y39 141 aa4.74□□□□□ -1.65
VPS13D-201ENST00000011700 TMEM61Q8N0U2 210 aa4.74□□□□□ -1.65
VPS13D-201ENST00000011700 TMEM213A2RRL7 107 aa4.74□□□□□ -1.65
VPS13D-201ENST00000011700 A0A1B0GW54 56 aa4.74□□□□□ -1.65
VPS13D-201ENST00000011700 DAND5Q8N907 189 aa4.74□□□□□ -1.65
VPS13D-201ENST00000011700 C17orf77Q96MU5 243 aa4.74□□□□□ -1.65
VPS13D-201ENST00000011700 LINC00574Q9H8X3 128 aa4.74□□□□□ -1.65
VPS13D-201ENST00000011700 GP9P14770 177 aa4.74□□□□□ -1.65
VPS13D-201ENST00000011700 WDR86Q86TI4 376 aa4.73□□□□□ -1.65
VPS13D-201ENST00000011700 C1orf147Q96MC9 270 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-201ENST00000011700 C10orf55Q5SWW7 151 aa4.73□□□□□ -1.65
VPS13D-201ENST00000011700 WISP1O95388 367 aa4.73□□□□□ -1.65
VPS13D-201ENST00000011700 NRACQ8N912 160 aa4.73□□□□□ -1.65
VPS13D-201ENST00000011700 FANCD2OSQ96PS1 177 aa4.73□□□□□ -1.65
VPS13D-201ENST00000011700 FAM236DA0A1B0GTK5 79 aa4.73□□□□□ -1.65
VPS13D-201ENST00000011700 FAM236CP0DP71 79 aa4.73□□□□□ -1.65
VPS13D-201ENST00000011700 ODF1Q14990 250 aa4.73□□□□□ -1.65
VPS13D-201ENST00000011700 DKK2Q9UBU2 259 aa4.73□□□□□ -1.65
VPS13D-201ENST00000011700 COX7BP24311 80 aa4.73□□□□□ -1.65
VPS13D-201ENST00000011700 IGKV1-6A0A0C4DH72 117 aa4.73□□□□□ -1.65
VPS13D-201ENST00000011700 HOXB4P17483 251 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-201ENST00000011700 FAM19A3Q7Z5A8 133 aa4.73□□□□□ -1.65
VPS13D-201ENST00000011700 CD24P25063 80 aa4.73□□□□□ -1.65
VPS13D-201ENST00000011700 LOXP28300 417 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-201ENST00000011700 KRTAP27-1Q3LI81 207 aa4.73□□□□□ -1.65
VPS13D-201ENST00000011700 C3orf22Q8N5N4 141 aa4.73□□□□□ -1.65
VPS13D-201ENST00000011700 RPL18AQ02543 176 aaKnown RBP4.72□□□□□ -1.65
VPS13D-201ENST00000011700 UBE2D2P62837 147 aa4.72□□□□□ -1.65
VPS13D-201ENST00000011700 ODF3L1Q8IXM7 274 aa4.72□□□□□ -1.65
VPS13D-201ENST00000011700 SERP2Q8N6R1 65 aa4.72□□□□□ -1.65
VPS13D-201ENST00000011700 FBXL19-AS1Q494R0 122 aa4.72□□□□□ -1.65
VPS13D-201ENST00000011700 NOP10Q9NPE3 64 aaKnown RBP4.72□□□□□ -1.65
VPS13D-201ENST00000011700 TRBV30A0A0K0K1B3 111 aa4.72□□□□□ -1.65
VPS13D-201ENST00000011700 PRO0255Q9UI72 69 aa4.72□□□□□ -1.65
VPS13D-201ENST00000011700 MUC22E2RYF6 1773 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-201ENST00000011700 GYPEP15421 78 aa4.72□□□□□ -1.65
VPS13D-201ENST00000011700 U3KQE9 123 aa4.72□□□□□ -1.65
VPS13D-201ENST00000011700 SP5Q6BEB4 398 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-201ENST00000011700 PYGO1Q9Y3Y4 419 aa4.71□□□□□ -1.65
VPS13D-201ENST00000011700 GATA1P15976 413 aaPredicted RBP4.71□□□□□ -1.65
VPS13D-201ENST00000011700 BLCAPP62952 87 aa4.71□□□□□ -1.65
VPS13D-201ENST00000011700 NDUFA7O95182 113 aa4.71□□□□□ -1.66
VPS13D-201ENST00000011700 RNF183Q96D59 192 aa4.71□□□□□ -1.66
VPS13D-201ENST00000011700 FSHBP01225 129 aa4.71□□□□□ -1.66
VPS13D-201ENST00000011700 IGHV3-53P01767 116 aa4.71□□□□□ -1.66
VPS13D-201ENST00000011700 ATP1A1-AS1Q5TC04 95 aa4.71□□□□□ -1.66
VPS13D-201ENST00000011700 SERP1Q9Y6X1 66 aa4.71□□□□□ -1.66
VPS13D-201ENST00000011700 AKAP13Q12802 2813 aa4.71□□□□□ -1.66
VPS13D-201ENST00000011700 M0QXV9 152 aa4.71□□□□□ -1.66
VPS13D-201ENST00000011700 IGKV1-39P01597 117 aa4.71□□□□□ -1.66
VPS13D-201ENST00000011700 IGKV1D-39P04432 117 aa4.71□□□□□ -1.66
VPS13D-201ENST00000011700 LY6DQ14210 128 aa4.7□□□□□ -1.66
VPS13D-201ENST00000011700 IGFL2Q6UWQ7 119 aa4.7□□□□□ -1.66
VPS13D-201ENST00000011700 PRSS33Q8NF86 280 aa4.7□□□□□ -1.66
VPS13D-201ENST00000011700 A0A0J9YX75 114 aa4.7□□□□□ -1.66
VPS13D-201ENST00000011700 IGKV4-1P06312 121 aa4.7□□□□□ -1.66
VPS13D-201ENST00000011700 GTSF1Q8WW33 167 aa4.7□□□□□ -1.66
VPS13D-201ENST00000011700 K7ERJ3 54 aa4.7□□□□□ -1.66
VPS13D-201ENST00000011700 RS1O15537 224 aa4.7□□□□□ -1.66
VPS13D-201ENST00000011700 AGPAT4-IT1Q9H0P7 198 aa4.7□□□□□ -1.66
VPS13D-201ENST00000011700 A0A0G2JRQ6 117 aa4.7□□□□□ -1.66
VPS13D-201ENST00000011700 I3L2K1 104 aa4.7□□□□□ -1.66
VPS13D-201ENST00000011700 TCL1BO95988 128 aa4.7□□□□□ -1.66
VPS13D-201ENST00000011700 MYCNOSP40205 109 aa4.7□□□□□ -1.66
VPS13D-201ENST00000011700 BRD3OSQ6XYD6 125 aa4.7□□□□□ -1.66
VPS13D-201ENST00000011700 WI2-2373I1.2A0A1W2PRP0 233 aa4.7□□□□□ -1.66
VPS13D-201ENST00000011700 C7orf33Q8WU49 177 aa4.7□□□□□ -1.66
VPS13D-201ENST00000011700 K7EN84 100 aa4.7□□□□□ -1.66
VPS13D-201ENST00000011700 SPAG11BQ08648 103 aa4.7□□□□□ -1.66
VPS13D-201ENST00000011700 SEM1Q6ZVN7 128 aa4.7□□□□□ -1.66
VPS13D-201ENST00000011700 Q96MF0 132 aa4.69□□□□□ -1.66
VPS13D-201ENST00000011700 KLK9Q9UKQ9 250 aa4.69□□□□□ -1.66
VPS13D-201ENST00000011700 FHL1Q13642 323 aa4.69□□□□□ -1.66
VPS13D-201ENST00000011700 DAZAP2Q15038 168 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-201ENST00000011700 UBE2D4Q9Y2X8 147 aa4.69□□□□□ -1.66
VPS13D-201ENST00000011700 ZNF726P1Q15940 193 aa4.69□□□□□ -1.66
VPS13D-201ENST00000011700 C20orf203Q8NBC4 194 aa4.69□□□□□ -1.66
VPS13D-201ENST00000011700 NXPH4O95158 308 aa4.69□□□□□ -1.66
VPS13D-201ENST00000011700 DIAPH2-AS1Q14236 149 aa4.69□□□□□ -1.66
VPS13D-201ENST00000011700 FAM120AOSQ5T036 256 aa4.69□□□□□ -1.66
VPS13D-201ENST00000011700 C5orf56Q8N8D9 126 aa4.69□□□□□ -1.66
VPS13D-201ENST00000011700 KMT2BQ9UMN6 2715 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-201ENST00000011700 CENPVL3A0A0U1RRI6 287 aa4.69□□□□□ -1.66
VPS13D-201ENST00000011700 Q0VFX4 171 aa4.69□□□□□ -1.66
VPS13D-201ENST00000011700 PRR30Q53SZ7 412 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-201ENST00000011700 K7EIM0 57 aa4.69□□□□□ -1.66
VPS13D-201ENST00000011700 PCP2Q8IVA1 136 aa4.69□□□□□ -1.66
VPS13D-201ENST00000011700 COL8A2P25067 703 aa4.69□□□□□ -1.66
VPS13D-201ENST00000011700 LRRC75A-AS1Q8N1F1 130 aa4.69□□□□□ -1.66
VPS13D-201ENST00000011700 VWCEQ96DN2 955 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms