RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 MRPL16Q9NX20 251 aaKnown RBP6.7□□□□□ -1.34
PHGDH-228ENST00000641847 DNAH2Q9P225 4427 aa6.7□□□□□ -1.34
PHGDH-228ENST00000641847 DYNC1H1Q14204 4646 aaKnown RBP6.69□□□□□ -1.34
PHGDH-228ENST00000641847 TRAV9-1A0A075B6T8 112 aa6.69□□□□□ -1.34
PHGDH-228ENST00000641847 TRGV1A0A0A0MS02 117 aa6.69□□□□□ -1.34
PHGDH-228ENST00000641847 A0A0J9YWU9 116 aa6.69□□□□□ -1.34
PHGDH-228ENST00000641847 A0A1B0GUT8 65 aa6.69□□□□□ -1.34
PHGDH-228ENST00000641847 M0R2P5 195 aa6.69□□□□□ -1.34
PHGDH-228ENST00000641847 TWIST1Q15672 202 aa6.69□□□□□ -1.34
PHGDH-228ENST00000641847 ZNF876PQ49A33 203 aa6.69□□□□□ -1.34
PHGDH-228ENST00000641847 BTF3L4Q96K17 158 aa6.69□□□□□ -1.34
PHGDH-228ENST00000641847 CNFNQ9BYD5 112 aa6.69□□□□□ -1.34
PHGDH-228ENST00000641847 C11orf68Q9H3H3 251 aaKnown RBP6.69□□□□□ -1.34
PHGDH-228ENST00000641847 RIGQ13278 110 aa6.68□□□□□ -1.34
PHGDH-228ENST00000641847 FAM222AQ5U5X8 452 aa6.68□□□□□ -1.34
PHGDH-228ENST00000641847 WDR73Q6P4I2 378 aa6.68□□□□□ -1.34
PHGDH-228ENST00000641847 Q6ZTI0 123 aa6.68□□□□□ -1.34
PHGDH-228ENST00000641847 ATP5L2Q7Z4Y8 100 aa6.68□□□□□ -1.34
PHGDH-228ENST00000641847 PHLDA1Q8WV24 401 aaPredicted RBP6.68□□□□□ -1.34
PHGDH-228ENST00000641847 AP1S3Q96PC3 154 aa6.68□□□□□ -1.34
PHGDH-228ENST00000641847 CELA1Q9UNI1 258 aa6.68□□□□□ -1.34
PHGDH-228ENST00000641847 DNAH11Q96DT5 4516 aa6.67□□□□□ -1.34
PHGDH-228ENST00000641847 IGHV4-4A0A075B6R2 117 aa6.67□□□□□ -1.34
PHGDH-228ENST00000641847 TGIF2-C20orf24A0A0A6YYL0 155 aa6.67□□□□□ -1.34
PHGDH-228ENST00000641847 TEX48A0A1B0GUV7 120 aa6.67□□□□□ -1.34
PHGDH-228ENST00000641847 A0A1B0GXF2 115 aa6.67□□□□□ -1.34
PHGDH-228ENST00000641847 GAGE12BA1L429 117 aa6.67□□□□□ -1.34
PHGDH-228ENST00000641847 LYRM9A8MSI8 78 aa6.67□□□□□ -1.34
PHGDH-228ENST00000641847 GAGE7O76087 117 aa6.67□□□□□ -1.34
PHGDH-228ENST00000641847 GAGE12FP0CL80 117 aa6.67□□□□□ -1.34
PHGDH-228ENST00000641847 GAGE12GP0CL81 117 aa6.67□□□□□ -1.34
PHGDH-228ENST00000641847 GAGE12IP0CL82 117 aa6.67□□□□□ -1.34
PHGDH-228ENST00000641847 NTF3P20783 257 aa6.67□□□□□ -1.34
PHGDH-228ENST00000641847 TCTAP57738 103 aa6.67□□□□□ -1.34
PHGDH-228ENST00000641847 HBBP68871 147 aa6.67□□□□□ -1.34
PHGDH-228ENST00000641847 ELOBQ15370 118 aa6.67□□□□□ -1.34
PHGDH-228ENST00000641847 LGALS9BQ3B8N2 356 aa6.67□□□□□ -1.34
PHGDH-228ENST00000641847 PTH2Q96A98 100 aa6.67□□□□□ -1.34
PHGDH-228ENST00000641847 YPEL4Q96NS1 127 aa6.67□□□□□ -1.34
PHGDH-228ENST00000641847 NDUFAF3Q9BU61 184 aa6.67□□□□□ -1.34
PHGDH-228ENST00000641847 MSRB1Q9NZV6 116 aa6.67□□□□□ -1.34
PHGDH-228ENST00000641847 DKK2Q9UBU2 259 aa6.67□□□□□ -1.34
PHGDH-228ENST00000641847 A0A1B0GW15 77 aa6.66□□□□□ -1.34
PHGDH-228ENST00000641847 TRGC1P0CF51 173 aa6.66□□□□□ -1.34
PHGDH-228ENST00000641847 SPART-AS1P0CW21 52 aa6.66□□□□□ -1.34
PHGDH-228ENST00000641847 DEFB130BP0DP73 79 aa6.66□□□□□ -1.34
PHGDH-228ENST00000641847 DEFB130AP0DP74 79 aa6.66□□□□□ -1.34
PHGDH-228ENST00000641847 CAMPP49913 170 aa6.66□□□□□ -1.34
PHGDH-228ENST00000641847 PIK3CD-AS1Q5SR53 167 aa6.66□□□□□ -1.34
PHGDH-228ENST00000641847 LINC00612Q8N6U2 182 aa6.66□□□□□ -1.34
PHGDH-228ENST00000641847 RASL10AQ92737 203 aa6.66□□□□□ -1.34
PHGDH-228ENST00000641847 JPT2Q9H910 190 aa6.66□□□□□ -1.34
PHGDH-228ENST00000641847 TRBV24-1A0A075B6N3 115 aa6.65□□□□□ -1.34
PHGDH-228ENST00000641847 TRGV2A0A075B6R0 118 aa6.65□□□□□ -1.34
PHGDH-228ENST00000641847 A0A087WWL8 130 aa6.65□□□□□ -1.34
PHGDH-228ENST00000641847 A8MWV9 139 aa6.65□□□□□ -1.34
PHGDH-228ENST00000641847 RS1O15537 224 aa6.65□□□□□ -1.34
PHGDH-228ENST00000641847 S100A8P05109 93 aa6.65□□□□□ -1.34
PHGDH-228ENST00000641847 SMIM15Q7Z3B0 74 aa6.65□□□□□ -1.34
PHGDH-228ENST00000641847 FAM210BQ96KR6 192 aa6.65□□□□□ -1.34
PHGDH-228ENST00000641847 HSPG2P98160 4391 aa6.65□□□□□ -1.35
PHGDH-228ENST00000641847 DNAH17Q9UFH2 4485 aa6.65□□□□□ -1.35
PHGDH-228ENST00000641847 IGHV3-73A0A0B4J1V6 119 aa6.64□□□□□ -1.35
PHGDH-228ENST00000641847 TRAV4A0A0B4J268 109 aa6.64□□□□□ -1.35
PHGDH-228ENST00000641847 IGHV3-53P01767 116 aa6.64□□□□□ -1.35
PHGDH-228ENST00000641847 MGPP08493 103 aa6.64□□□□□ -1.35
PHGDH-228ENST00000641847 SMIM17P0DL12 118 aa6.64□□□□□ -1.35
PHGDH-228ENST00000641847 EVI2AP22794 236 aa6.64□□□□□ -1.35
PHGDH-228ENST00000641847 RAB4BP61018 213 aa6.64□□□□□ -1.35
PHGDH-228ENST00000641847 DAD1P61803 113 aa6.64□□□□□ -1.35
PHGDH-228ENST00000641847 FAM74A4Q5TZK3 123 aa6.64□□□□□ -1.35
PHGDH-228ENST00000641847 CFAP126Q5VTH2 177 aa6.64□□□□□ -1.35
PHGDH-228ENST00000641847 RASL11AQ6T310 242 aa6.64□□□□□ -1.35
PHGDH-228ENST00000641847 C14orf178Q8N769 122 aaPredicted RBP6.64□□□□□ -1.35
PHGDH-228ENST00000641847 GATD1Q8NB37 220 aa6.64□□□□□ -1.35
PHGDH-228ENST00000641847 OR4C5Q8NGB2 326 aa6.64□□□□□ -1.35
PHGDH-228ENST00000641847 SAMD10Q9BYL1 202 aa6.64□□□□□ -1.35
PHGDH-228ENST00000641847 PRSS29PA6NIE9 313 aa6.63□□□□□ -1.35
PHGDH-228ENST00000641847 COLCA2A8K830 154 aa6.63□□□□□ -1.35
PHGDH-228ENST00000641847 RHODO00212 210 aa6.63□□□□□ -1.35
PHGDH-228ENST00000641847 CRYGDP07320 174 aa6.63□□□□□ -1.35
PHGDH-228ENST00000641847 C12orf74Q32Q52 190 aa6.63□□□□□ -1.35
PHGDH-228ENST00000641847 TMEM136Q6ZRR5 245 aa6.63□□□□□ -1.35
PHGDH-228ENST00000641847 AMN1Q8IY45 258 aa6.63□□□□□ -1.35
PHGDH-228ENST00000641847 POM121L12Q8N7R1 296 aa6.63□□□□□ -1.35
PHGDH-228ENST00000641847 C11orf45Q8TAV5 145 aa6.63□□□□□ -1.35
PHGDH-228ENST00000641847 ZNF479Q96JC4 524 aa6.63□□□□□ -1.35
PHGDH-228ENST00000641847 C18orf15Q96N68 181 aa6.63□□□□□ -1.35
PHGDH-228ENST00000641847 TMEM191AQ9H0A3 160 aa6.63□□□□□ -1.35
PHGDH-228ENST00000641847 DPH3P1Q9H4G8 78 aa6.63□□□□□ -1.35
PHGDH-228ENST00000641847 KIF25-AS1Q9Y6Z4 181 aa6.63□□□□□ -1.35
PHGDH-228ENST00000641847 PKD1P98161 4303 aa6.63□□□□□ -1.35
PHGDH-228ENST00000641847 A0A1B0GVY2 172 aa6.62□□□□□ -1.35
PHGDH-228ENST00000641847 NANOS2P60321 138 aaKnown RBP6.62□□□□□ -1.35
PHGDH-228ENST00000641847 ZNF56Q15929 161 aa6.62□□□□□ -1.35
PHGDH-228ENST00000641847 COX19Q49B96 90 aa6.62□□□□□ -1.35
PHGDH-228ENST00000641847 UFSP1Q6NVU6 142 aa6.62□□□□□ -1.35
PHGDH-228ENST00000641847 ZFP2Q6ZN57 461 aa6.62□□□□□ -1.35
PHGDH-228ENST00000641847 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.62□□□□□ -1.35
PHGDH-228ENST00000641847 KRTAP4-5Q9BYR2 181 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms