RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 CEMP1Q6PRD7 247 aaPredicted RBP4.39□□□□□ -1.71
SCARB2-218ENST00000639715 Q71RC1 249 aaPredicted RBP4.39□□□□□ -1.71
SCARB2-218ENST00000639715 BAALCQ8WXS3 180 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 DPH3Q96FX2 82 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 IGHV3OR16-10A0A075B7F0 116 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 WI2-2373I1.2A0A1W2PRP0 233 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 KNCNA6PVL3 124 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 RNASE4P34096 147 aaKnown RBP4.39□□□□□ -1.71
SCARB2-218ENST00000639715 CIRBPQ14011 172 aaKnown RBP4.39□□□□□ -1.71
SCARB2-218ENST00000639715 NPBQ8NG41 125 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 DYNLRB2Q8TF09 96 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 CFHR4Q92496 578 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 C8orf49Q96NF6 230 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 MLST8Q9BVC4 326 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.39□□□□□ -1.712e-8■■■□□ 17.7
SCARB2-218ENST00000639715 CRYGBP07316 175 aa4.38□□□□□ -1.71
SCARB2-218ENST00000639715 MYCNOSP40205 109 aa4.38□□□□□ -1.71
SCARB2-218ENST00000639715 RBMY1BA6NDE4 496 aaKnown RBP4.38□□□□□ -1.71
SCARB2-218ENST00000639715 RBMY1EA6NEQ0 496 aaKnown RBP4.38□□□□□ -1.71
SCARB2-218ENST00000639715 RBMY1DP0C7P1 496 aaKnown RBP4.38□□□□□ -1.71
SCARB2-218ENST00000639715 RBMY1A1P0DJD3 496 aaKnown RBP4.38□□□□□ -1.71
SCARB2-218ENST00000639715 RBMY1CP0DJD4 496 aa4.38□□□□□ -1.71
SCARB2-218ENST00000639715 SAA4P35542 130 aa4.38□□□□□ -1.71
SCARB2-218ENST00000639715 RBMY1FQ15415 496 aaKnown RBP4.38□□□□□ -1.71
SCARB2-218ENST00000639715 C20orf173Q96LM9 149 aa4.38□□□□□ -1.71
SCARB2-218ENST00000639715 MSRB1Q9NZV6 116 aa4.38□□□□□ -1.71
SCARB2-218ENST00000639715 PYGO1Q9Y3Y4 419 aa4.38□□□□□ -1.71
SCARB2-218ENST00000639715 SPTBN5Q9NRC6 3674 aaKnown RBP4.38□□□□□ -1.71
SCARB2-218ENST00000639715 K7EIM0 57 aa4.38□□□□□ -1.71
SCARB2-218ENST00000639715 LY6HO94772 140 aa4.38□□□□□ -1.71
SCARB2-218ENST00000639715 INAFM2P0DMQ5 153 aa4.38□□□□□ -1.71
SCARB2-218ENST00000639715 ERCC8Q13216 396 aa4.38□□□□□ -1.71
SCARB2-218ENST00000639715 C2orf66Q6UXQ4 117 aa4.38□□□□□ -1.71
SCARB2-218ENST00000639715 DTX2Q86UW9 622 aa4.38□□□□□ -1.71
SCARB2-218ENST00000639715 SIRPDQ9H106 197 aa4.38□□□□□ -1.71
SCARB2-218ENST00000639715 DPH3P1Q9H4G8 78 aa4.38□□□□□ -1.71
SCARB2-218ENST00000639715 FSTL3O95633 263 aa4.37□□□□□ -1.71
SCARB2-218ENST00000639715 IGHV3-11P01762 117 aa4.37□□□□□ -1.71
SCARB2-218ENST00000639715 HTN1P15515 57 aa4.37□□□□□ -1.71
SCARB2-218ENST00000639715 UBE2D1P51668 147 aa4.37□□□□□ -1.71
SCARB2-218ENST00000639715 PIP4P2Q8N4L2 257 aa4.37□□□□□ -1.71
SCARB2-218ENST00000639715 PTPRQQ9UMZ3 2332 aa4.37□□□□□ -1.71
SCARB2-218ENST00000639715 CUL9Q8IWT3 2517 aa4.37□□□□□ -1.71
SCARB2-218ENST00000639715 IGKV1D-37A0A075B6S9 117 aa4.37□□□□□ -1.71
SCARB2-218ENST00000639715 TRAV26-2A0A0B4J265 109 aa4.37□□□□□ -1.71
SCARB2-218ENST00000639715 TEX22C9J3V5 150 aa4.37□□□□□ -1.71
SCARB2-218ENST00000639715 E7EUB6 86 aa4.37□□□□□ -1.71
SCARB2-218ENST00000639715 J3QQQ9 107 aa4.37□□□□□ -1.71
SCARB2-218ENST00000639715 COX6B1P14854 86 aa4.37□□□□□ -1.71
SCARB2-218ENST00000639715 FAM74A4Q5TZK3 123 aa4.37□□□□□ -1.71
SCARB2-218ENST00000639715 C1orf229Q6ZS94 237 aaPredicted RBP4.37□□□□□ -1.71
SCARB2-218ENST00000639715 MUSTN1Q8IVN3 82 aa4.37□□□□□ -1.71
SCARB2-218ENST00000639715 CLEC2BQ92478 149 aa4.37□□□□□ -1.71
SCARB2-218ENST00000639715 DSCR9P59020 149 aa4.37□□□□□ -1.71
SCARB2-218ENST00000639715 SERP2Q8N6R1 65 aa4.37□□□□□ -1.71
SCARB2-218ENST00000639715 IGLV11-55A0A075B6I3 123 aa4.37□□□□□ -1.71
SCARB2-218ENST00000639715 ATP6V0E1O15342 81 aa4.37□□□□□ -1.71
SCARB2-218ENST00000639715 IGHV3-33P01772 117 aa4.37□□□□□ -1.71
SCARB2-218ENST00000639715 MRPL53Q96EL3 112 aaKnown RBP4.37□□□□□ -1.71
SCARB2-218ENST00000639715 RITA1Q96K30 269 aa4.37□□□□□ -1.71
SCARB2-218ENST00000639715 MRPL36Q9P0J6 103 aaKnown RBP4.37□□□□□ -1.71
SCARB2-218ENST00000639715 NAV3Q8IVL0 2385 aa4.36□□□□□ -1.71
SCARB2-218ENST00000639715 FBXL19-AS1Q494R0 122 aa4.36□□□□□ -1.71
SCARB2-218ENST00000639715 RNF182Q8N6D2 247 aa4.36□□□□□ -1.71
SCARB2-218ENST00000639715 FAM208BQ5VWN6 2430 aa4.36□□□□□ -1.71
SCARB2-218ENST00000639715 TRBV7-7A0A0K0K1E9 115 aa4.36□□□□□ -1.71
SCARB2-218ENST00000639715 CENPFP49454 3210 aa4.36□□□□□ -1.71
SCARB2-218ENST00000639715 IGFL4Q6B9Z1 124 aa4.36□□□□□ -1.71
SCARB2-218ENST00000639715 SDIM1Q6ZPB5 146 aa4.36□□□□□ -1.71
SCARB2-218ENST00000639715 C20orf197Q8N268 126 aa4.36□□□□□ -1.71
SCARB2-218ENST00000639715 C1orf159Q96HA4 380 aa4.36□□□□□ -1.71
SCARB2-218ENST00000639715 C17orf77Q96MU5 243 aa4.36□□□□□ -1.71
SCARB2-218ENST00000639715 LENEPQ9Y5L5 61 aa4.36□□□□□ -1.71
SCARB2-218ENST00000639715 LINC01619G3V211 115 aa4.36□□□□□ -1.71
SCARB2-218ENST00000639715 BPESC1Q9GZL8 116 aa4.36□□□□□ -1.71
SCARB2-218ENST00000639715 AGPAT4-IT1Q9H0P7 198 aa4.36□□□□□ -1.71
SCARB2-218ENST00000639715 ICOSQ9Y6W8 199 aa4.36□□□□□ -1.71
SCARB2-218ENST00000639715 NACAE9PAV3 2078 aa4.36□□□□□ -1.71
SCARB2-218ENST00000639715 A0A0J9YY99 117 aa4.35□□□□□ -1.71
SCARB2-218ENST00000639715 A0A0U1RRA0 63 aa4.35□□□□□ -1.71
SCARB2-218ENST00000639715 FAM240AA0A1B0GVK7 77 aa4.35□□□□□ -1.71
SCARB2-218ENST00000639715 A0A1W2PRX2 142 aa4.35□□□□□ -1.71
SCARB2-218ENST00000639715 VCYO14598 125 aa4.35□□□□□ -1.71
SCARB2-218ENST00000639715 ZMAT4Q9H898 229 aa4.35□□□□□ -1.71
SCARB2-218ENST00000639715 U3KQE9 123 aa4.35□□□□□ -1.71
SCARB2-218ENST00000639715 BAALC-AS2P0C853 105 aa4.35□□□□□ -1.71
SCARB2-218ENST00000639715 CRYGAP11844 174 aa4.35□□□□□ -1.71
SCARB2-218ENST00000639715 B4DSR2 109 aa4.35□□□□□ -1.71
SCARB2-218ENST00000639715 H3BUX3 64 aa4.35□□□□□ -1.71
SCARB2-218ENST00000639715 NDUFA4O00483 81 aa4.35□□□□□ -1.71
SCARB2-218ENST00000639715 SPRY2O43597 315 aa4.35□□□□□ -1.71
SCARB2-218ENST00000639715 P0DMU3 169 aa4.35□□□□□ -1.71
SCARB2-218ENST00000639715 FAM231AP0DMU4 169 aa4.35□□□□□ -1.71
SCARB2-218ENST00000639715 FAM231CP0DMU5 169 aa4.35□□□□□ -1.71
SCARB2-218ENST00000639715 RPL18AQ02543 176 aaKnown RBP4.35□□□□□ -1.71
SCARB2-218ENST00000639715 ZNF625Q96I27 306 aaPredicted RBP4.35□□□□□ -1.71
SCARB2-218ENST00000639715 SMIM2Q9BVW6 85 aa4.35□□□□□ -1.71
SCARB2-218ENST00000639715 DAZ1Q9NQZ3 744 aaKnown RBP4.35□□□□□ -1.71
SCARB2-218ENST00000639715 ACACBO00763 2458 aa4.35□□□□□ -1.71
SCARB2-218ENST00000639715 TRAV12-1A0A0B4J245 112 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms