RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 J3QQQ9 107 aa11.11□□□□□ -0.63
SCARB2-216ENST00000639300 K7EMI3 77 aa11.11□□□□□ -0.63
SCARB2-216ENST00000639300 NDUFA12Q9UI09 145 aa11.11□□□□□ -0.63
SCARB2-216ENST00000639300 TRBV25-1A0A075B6N4 114 aa11.1□□□□□ -0.63
SCARB2-216ENST00000639300 LOXL1Q08397 574 aaPredicted RBP11.1□□□□□ -0.63
SCARB2-216ENST00000639300 CRPP02741 224 aa11.1□□□□□ -0.63
SCARB2-216ENST00000639300 LGALS1P09382 135 aaKnown RBP11.1□□□□□ -0.63
SCARB2-216ENST00000639300 MLST8Q9BVC4 326 aa11.1□□□□□ -0.63
SCARB2-216ENST00000639300 C19orf84I3L1E1 186 aa11.09□□□□□ -0.63
SCARB2-216ENST00000639300 CCL25O15444 150 aa11.09□□□□□ -0.63
SCARB2-216ENST00000639300 TRAV8-4A0A0B4J246 113 aa11.09□□□□□ -0.63
SCARB2-216ENST00000639300 A0A1W2PPM0 123 aa11.09□□□□□ -0.63
SCARB2-216ENST00000639300 CEND1Q8N111 149 aa11.09□□□□□ -0.63
SCARB2-216ENST00000639300 DEFB125Q8N687 156 aa11.09□□□□□ -0.63
SCARB2-216ENST00000639300 FOXI2Q6ZQN5 318 aa11.09□□□□□ -0.63
SCARB2-216ENST00000639300 A0A1B0GXF2 115 aa11.08□□□□□ -0.64
SCARB2-216ENST00000639300 C2orf70A6NJV1 201 aa11.08□□□□□ -0.64
SCARB2-216ENST00000639300 PFN2P35080 140 aa11.08□□□□□ -0.64
SCARB2-216ENST00000639300 GAGE6Q13070 117 aa11.08□□□□□ -0.64
SCARB2-216ENST00000639300 S100A7L2Q5SY68 101 aa11.08□□□□□ -0.64
SCARB2-216ENST00000639300 JPT2Q9H910 190 aa11.08□□□□□ -0.64
SCARB2-216ENST00000639300 RNF114Q9Y508 228 aa11.08□□□□□ -0.64
SCARB2-216ENST00000639300 EPG5Q9HCE0 2579 aa11.07□□□□□ -0.64
SCARB2-216ENST00000639300 K7EP34 96 aa11.07□□□□□ -0.64
SCARB2-216ENST00000639300 IGHG2P01859 326 aa11.07□□□□□ -0.64
SCARB2-216ENST00000639300 CCDC140Q96MF4 163 aa11.07□□□□□ -0.64
SCARB2-216ENST00000639300 U3KQE9 123 aa11.07□□□□□ -0.64
SCARB2-216ENST00000639300 GAGE2BQ13066 116 aa11.07□□□□□ -0.64
SCARB2-216ENST00000639300 C12orf74Q32Q52 190 aa11.07□□□□□ -0.64
SCARB2-216ENST00000639300 GAGE2EQ4V326 116 aa11.07□□□□□ -0.64
SCARB2-216ENST00000639300 MBD6Q96DN6 1003 aa11.07□□□□□ -0.64
SCARB2-216ENST00000639300 GAGE2DQ9UEU5 116 aa11.07□□□□□ -0.64
SCARB2-216ENST00000639300 CTRLP40313 264 aa11.07□□□□□ -0.64
SCARB2-216ENST00000639300 SUMO4Q6EEV6 95 aa11.06□□□□□ -0.64
SCARB2-216ENST00000639300 C9orf47Q6ZRZ4 202 aa11.06□□□□□ -0.64
SCARB2-216ENST00000639300 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.06□□□□□ -0.64
SCARB2-216ENST00000639300 IGHV4OR15-8A0A075B7B6 117 aa11.06□□□□□ -0.64
SCARB2-216ENST00000639300 A0A087WW49 117 aa11.06□□□□□ -0.64
SCARB2-216ENST00000639300 IGKV2-29A2NJV5 120 aaPredicted RBP11.06□□□□□ -0.64
SCARB2-216ENST00000639300 ODF3BA8MYP8 253 aa11.06□□□□□ -0.64
SCARB2-216ENST00000639300 FGF6P10767 208 aa11.06□□□□□ -0.64
SCARB2-216ENST00000639300 RPL39P62891 51 aaKnown RBP11.06□□□□□ -0.64
SCARB2-216ENST00000639300 A0A096LPF7 62 aa11.06□□□□□ -0.64
SCARB2-216ENST00000639300 ATG2AQ2TAZ0 1938 aa11.06□□□□□ -0.64
SCARB2-216ENST00000639300 SIVA1O15304 175 aa11.06□□□□□ -0.64
SCARB2-216ENST00000639300 TP53TG3Q9ULZ0 132 aa11.06□□□□□ -0.64
SCARB2-216ENST00000639300 CRYGBP07316 175 aa11.05□□□□□ -0.64
SCARB2-216ENST00000639300 SPINK8P0C7L1 97 aa11.05□□□□□ -0.64
SCARB2-216ENST00000639300 Q8N1Y9 231 aa11.05□□□□□ -0.64
SCARB2-216ENST00000639300 PRO1854Q9UHT4 67 aa11.05□□□□□ -0.64
SCARB2-216ENST00000639300 LEPROTO15243 131 aa11.05□□□□□ -0.64
SCARB2-216ENST00000639300 SCRT2Q9NQ03 307 aa11.05□□□□□ -0.64
SCARB2-216ENST00000639300 ACANP16112 2415 aa11.05□□□□□ -0.64
SCARB2-216ENST00000639300 A0A0J9YXV3 536 aa11.05□□□□□ -0.64
SCARB2-216ENST00000639300 CCL24O00175 119 aa11.05□□□□□ -0.64
SCARB2-216ENST00000639300 ANAPC13Q9BS18 74 aa11.05□□□□□ -0.64
SCARB2-216ENST00000639300 TMEM243Q9BU79 118 aa11.05□□□□□ -0.64
SCARB2-216ENST00000639300 TP73-AS1Q9UF72 201 aa11.05□□□□□ -0.64
SCARB2-216ENST00000639300 SLC25A20O43772 301 aa11.04□□□□□ -0.64
SCARB2-216ENST00000639300 NOP10Q9NPE3 64 aaKnown RBP11.04□□□□□ -0.64
SCARB2-216ENST00000639300 F5H768 121 aa11.04□□□□□ -0.64
SCARB2-216ENST00000639300 DEFB113Q30KQ7 82 aa11.04□□□□□ -0.64
SCARB2-216ENST00000639300 ZNF48Q96MX3 618 aaPredicted RBP11.04□□□□□ -0.64
SCARB2-216ENST00000639300 TSSC4Q9Y5U2 329 aaPredicted RBP11.04□□□□□ -0.64
SCARB2-216ENST00000639300 ZFP2Q6ZN57 461 aa11.03□□□□□ -0.64
SCARB2-216ENST00000639300 FXYD2P54710 66 aa11.03□□□□□ -0.64
SCARB2-216ENST00000639300 SS18Q15532 418 aa11.03□□□□□ -0.64
SCARB2-216ENST00000639300 J3QKU1 62 aa11.02□□□□□ -0.64
SCARB2-216ENST00000639300 NXPH4O95158 308 aa11.02□□□□□ -0.64
SCARB2-216ENST00000639300 IGF1P05019 195 aa11.02□□□□□ -0.65
SCARB2-216ENST00000639300 CDSNQ15517 529 aa11.02□□□□□ -0.65
SCARB2-216ENST00000639300 TAL2Q16559 108 aa11.02□□□□□ -0.65
SCARB2-216ENST00000639300 MDFICQ9P1T7 246 aa11.02□□□□□ -0.65
SCARB2-216ENST00000639300 TRBV6-1A0A0K0K1D8 114 aa11.02□□□□□ -0.65
SCARB2-216ENST00000639300 LY6LH3BQJ8 138 aa11.02□□□□□ -0.65
SCARB2-216ENST00000639300 CRIP1P50238 77 aa11.02□□□□□ -0.65
SCARB2-216ENST00000639300 CHD9Q3L8U1 2897 aa11.02□□□□□ -0.65
SCARB2-216ENST00000639300 TRBV20-1A0A075B6N2 111 aa11.01□□□□□ -0.65
SCARB2-216ENST00000639300 GPHB5Q86YW7 130 aa11.01□□□□□ -0.65
SCARB2-216ENST00000639300 DAD1P61803 113 aa11□□□□□ -0.65
SCARB2-216ENST00000639300 RHOHQ15669 191 aa11□□□□□ -0.65
SCARB2-216ENST00000639300 DEFB121Q5J5C9 76 aa11□□□□□ -0.65
SCARB2-216ENST00000639300 CLPSL2Q6UWE3 100 aa11□□□□□ -0.65
SCARB2-216ENST00000639300 ODF1Q14990 250 aa11□□□□□ -0.65
SCARB2-216ENST00000639300 ZFAND6Q6FIF0 208 aa11□□□□□ -0.65
SCARB2-216ENST00000639300 TMEM61Q8N0U2 210 aa11□□□□□ -0.65
SCARB2-216ENST00000639300 A6NDX4 124 aa10.99□□□□□ -0.65
SCARB2-216ENST00000639300 F8W1H4 67 aa10.99□□□□□ -0.65
SCARB2-216ENST00000639300 K7EMT4 169 aa10.99□□□□□ -0.65
SCARB2-216ENST00000639300 SRSF2Q01130 221 aaKnown RBP10.99□□□□□ -0.65
SCARB2-216ENST00000639300 SPAG8Q99932 426 aaPredicted RBP10.99□□□□□ -0.65
SCARB2-216ENST00000639300 TAX1BP3O14907 124 aa10.99□□□□□ -0.65
SCARB2-216ENST00000639300 SH2D6Q7Z4S9 175 aa10.99□□□□□ -0.65
SCARB2-216ENST00000639300 MYCNOSP40205 109 aa10.98□□□□□ -0.65
SCARB2-216ENST00000639300 BOD1L2Q8IYS8 172 aa10.98□□□□□ -0.65
SCARB2-216ENST00000639300 C3orf56Q8N813 242 aa10.97□□□□□ -0.65
SCARB2-216ENST00000639300 IGLC6P0CF74 106 aa10.97□□□□□ -0.65
SCARB2-216ENST00000639300 RNASE8Q8TDE3 154 aaKnown RBP10.97□□□□□ -0.65
SCARB2-216ENST00000639300 OPRPNQ99935 248 aaPredicted RBP10.97□□□□□ -0.65
SCARB2-216ENST00000639300 IGLL5B9A064 214 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms