RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 MUC4Q99102 2169 aa4.79□□□□□ -1.64
UPF3B-205ENST00000636792 MEGF8Q7Z7M0 2845 aa4.78□□□□□ -1.64
UPF3B-205ENST00000636792 NACAE9PAV3 2078 aa4.78□□□□□ -1.64
UPF3B-205ENST00000636792 TRGV1A0A0A0MS02 117 aa4.78□□□□□ -1.64
UPF3B-205ENST00000636792 NUPR2A6NF83 97 aa4.78□□□□□ -1.64
UPF3B-205ENST00000636792 HIGD1CA8MV81 97 aa4.78□□□□□ -1.64
UPF3B-205ENST00000636792 H3BNG1 76 aa4.78□□□□□ -1.64
UPF3B-205ENST00000636792 GNRH2O43555 120 aa4.78□□□□□ -1.64
UPF3B-205ENST00000636792 S100PP25815 95 aa4.78□□□□□ -1.64
UPF3B-205ENST00000636792 RNF212Q495C1 297 aa4.78□□□□□ -1.64
UPF3B-205ENST00000636792 ZNF876PQ49A33 203 aa4.78□□□□□ -1.64
UPF3B-205ENST00000636792 COX19Q49B96 90 aa4.78□□□□□ -1.64
UPF3B-205ENST00000636792 SPANXN1Q5VSR9 72 aa4.78□□□□□ -1.64
UPF3B-205ENST00000636792 ZNF575Q86XF7 245 aa4.78□□□□□ -1.64
UPF3B-205ENST00000636792 WWC2-AS2Q96NR7 200 aa4.78□□□□□ -1.64
UPF3B-205ENST00000636792 PRKDCP78527 4128 aaKnown RBP4.77□□□□□ -1.65
UPF3B-205ENST00000636792 TRGV2A0A075B6R0 118 aa4.77□□□□□ -1.65
UPF3B-205ENST00000636792 TRAV10A0A0B4J240 114 aa4.77□□□□□ -1.65
UPF3B-205ENST00000636792 A0A1B0GUT8 65 aa4.77□□□□□ -1.65
UPF3B-205ENST00000636792 GRIFINA4D1Z8 144 aa4.77□□□□□ -1.65
UPF3B-205ENST00000636792 RS1O15537 224 aa4.77□□□□□ -1.65
UPF3B-205ENST00000636792 APOC3P02656 99 aa4.77□□□□□ -1.65
UPF3B-205ENST00000636792 S100A1P23297 94 aa4.77□□□□□ -1.65
UPF3B-205ENST00000636792 RIGQ13278 110 aa4.77□□□□□ -1.65
UPF3B-205ENST00000636792 Q6ZQT7 251 aa4.77□□□□□ -1.65
UPF3B-205ENST00000636792 SMIM15Q7Z3B0 74 aa4.77□□□□□ -1.65
UPF3B-205ENST00000636792 TMSB15BA0A087X1C1 80 aa4.76□□□□□ -1.65
UPF3B-205ENST00000636792 C7orf77A4D0Y5 90 aa4.76□□□□□ -1.65
UPF3B-205ENST00000636792 M0R381 172 aa4.76□□□□□ -1.65
UPF3B-205ENST00000636792 SMIM17P0DL12 118 aa4.76□□□□□ -1.65
UPF3B-205ENST00000636792 HBBP68871 147 aa4.76□□□□□ -1.65
UPF3B-205ENST00000636792 LYZL1Q6UWQ5 148 aa4.76□□□□□ -1.65
UPF3B-205ENST00000636792 Q6ZTI0 123 aa4.76□□□□□ -1.65
UPF3B-205ENST00000636792 C15orf53Q8NAA6 179 aa4.76□□□□□ -1.65
UPF3B-205ENST00000636792 GATD1Q8NB37 220 aa4.76□□□□□ -1.65
UPF3B-205ENST00000636792 OR4C5Q8NGB2 326 aa4.76□□□□□ -1.65
UPF3B-205ENST00000636792 OR10AG1Q8NH19 301 aa4.76□□□□□ -1.65
UPF3B-205ENST00000636792 GTSF1Q8WW33 167 aa4.76□□□□□ -1.65
UPF3B-205ENST00000636792 DPH3P1Q9H4G8 78 aa4.76□□□□□ -1.65
UPF3B-205ENST00000636792 MRPL16Q9NX20 251 aaKnown RBP4.76□□□□□ -1.65
UPF3B-205ENST00000636792 CELA1Q9UNI1 258 aa4.76□□□□□ -1.65
UPF3B-205ENST00000636792 TRBV10-1A0A0K0K1A3 114 aa4.75□□□□□ -1.65
UPF3B-205ENST00000636792 TRBV6-4A0A1B0GX49 114 aa4.75□□□□□ -1.65
UPF3B-205ENST00000636792 GAGE12BA1L429 117 aa4.75□□□□□ -1.65
UPF3B-205ENST00000636792 C3orf84H3BNL1 204 aa4.75□□□□□ -1.65
UPF3B-205ENST00000636792 H7C1H1 209 aa4.75□□□□□ -1.65
UPF3B-205ENST00000636792 GAGE7O76087 117 aa4.75□□□□□ -1.65
UPF3B-205ENST00000636792 MT-ND6P03923 174 aa4.75□□□□□ -1.65
UPF3B-205ENST00000636792 GAGE12FP0CL80 117 aa4.75□□□□□ -1.65
UPF3B-205ENST00000636792 GAGE12GP0CL81 117 aa4.75□□□□□ -1.65
UPF3B-205ENST00000636792 GAGE12IP0CL82 117 aa4.75□□□□□ -1.65
UPF3B-205ENST00000636792 DEFB130BP0DP73 79 aa4.75□□□□□ -1.65
UPF3B-205ENST00000636792 DEFB130AP0DP74 79 aa4.75□□□□□ -1.65
UPF3B-205ENST00000636792 EMP1P54849 157 aa4.75□□□□□ -1.65
UPF3B-205ENST00000636792 RAB4BP61018 213 aa4.75□□□□□ -1.65
UPF3B-205ENST00000636792 RHOHQ15669 191 aa4.75□□□□□ -1.65
UPF3B-205ENST00000636792 C12orf74Q32Q52 190 aa4.75□□□□□ -1.65
UPF3B-205ENST00000636792 CFAP126Q5VTH2 177 aa4.75□□□□□ -1.65
UPF3B-205ENST00000636792 SH2D6Q7Z4S9 175 aa4.75□□□□□ -1.65
UPF3B-205ENST00000636792 SLC7A5P1Q8MH63 180 aa4.75□□□□□ -1.65
UPF3B-205ENST00000636792 NUP35Q8NFH5 326 aa4.75□□□□□ -1.65
UPF3B-205ENST00000636792 TPPP3Q9BW30 176 aa4.75□□□□□ -1.65
UPF3B-205ENST00000636792 TMEM191AQ9H0A3 160 aa4.75□□□□□ -1.65
UPF3B-205ENST00000636792 RPS10P5Q9NQ39 176 aa4.75□□□□□ -1.65
UPF3B-205ENST00000636792 PRO0255Q9UI72 69 aa4.75□□□□□ -1.65
UPF3B-205ENST00000636792 KLK5Q9Y337 293 aaPredicted RBP4.75□□□□□ -1.65
UPF3B-205ENST00000636792 TENM3Q9P273 2699 aa4.74□□□□□ -1.65
UPF3B-205ENST00000636792 TRBV24-1A0A075B6N3 115 aa4.74□□□□□ -1.65
UPF3B-205ENST00000636792 TRAV26-1A0A087WT03 109 aa4.74□□□□□ -1.65
UPF3B-205ENST00000636792 A0A1B0GXF2 115 aa4.74□□□□□ -1.65
UPF3B-205ENST00000636792 DEFB4AO15263 64 aa4.74□□□□□ -1.65
UPF3B-205ENST00000636792 PPP1R17O96001 155 aa4.74□□□□□ -1.65
UPF3B-205ENST00000636792 IGHV3-53P01767 116 aa4.74□□□□□ -1.65
UPF3B-205ENST00000636792 GZMBP10144 247 aa4.74□□□□□ -1.65
UPF3B-205ENST00000636792 GATA1P15976 413 aaPredicted RBP4.74□□□□□ -1.65
UPF3B-205ENST00000636792 NTF3P20783 257 aa4.74□□□□□ -1.65
UPF3B-205ENST00000636792 TWIST1Q15672 202 aa4.74□□□□□ -1.65
UPF3B-205ENST00000636792 UFSP1Q6NVU6 142 aa4.74□□□□□ -1.65
UPF3B-205ENST00000636792 Q6ZTC4 211 aa4.74□□□□□ -1.65
UPF3B-205ENST00000636792 POM121L12Q8N7R1 296 aa4.74□□□□□ -1.65
UPF3B-205ENST00000636792 MUC7Q8TAX7 377 aa4.74□□□□□ -1.65
UPF3B-205ENST00000636792 PRADC1Q9BSG0 188 aa4.74□□□□□ -1.65
UPF3B-205ENST00000636792 SMCO4Q9NRQ5 59 aa4.74□□□□□ -1.65
UPF3B-205ENST00000636792 KIF25-AS1Q9Y6Z4 181 aa4.74□□□□□ -1.65
UPF3B-205ENST00000636792 STAB2Q8WWQ8 2551 aa4.74□□□□□ -1.65
UPF3B-205ENST00000636792 DEFB131BA0A096LNP1 70 aa4.73□□□□□ -1.65
UPF3B-205ENST00000636792 TRGV4A0A0C4DH28 118 aa4.73□□□□□ -1.65
UPF3B-205ENST00000636792 K7EQD1 137 aa4.73□□□□□ -1.65
UPF3B-205ENST00000636792 HLA-DQA1P01909 254 aa4.73□□□□□ -1.65
UPF3B-205ENST00000636792 PPBPP02775 128 aa4.73□□□□□ -1.65
UPF3B-205ENST00000636792 PRM2P04554 102 aa4.73□□□□□ -1.65
UPF3B-205ENST00000636792 CRYGDP07320 174 aa4.73□□□□□ -1.65
UPF3B-205ENST00000636792 CEMP1Q6PRD7 247 aaPredicted RBP4.73□□□□□ -1.65
UPF3B-205ENST00000636792 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.73□□□□□ -1.65
UPF3B-205ENST00000636792 PHLDA1Q8WV24 401 aaPredicted RBP4.73□□□□□ -1.65
UPF3B-205ENST00000636792 MRAP2Q96G30 205 aa4.73□□□□□ -1.65
UPF3B-205ENST00000636792 PGLYRP4Q96LB8 373 aa4.73□□□□□ -1.65
UPF3B-205ENST00000636792 LAMTOR2Q9Y2Q5 125 aa4.73□□□□□ -1.65
UPF3B-205ENST00000636792 DNAH9Q9NYC9 4486 aa4.72□□□□□ -1.65
UPF3B-205ENST00000636792 F5H768 121 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms