RNA–Protein interactions for RNA: ENST00000629659.2

EWSR1-222, Transcript of EWS RNA binding protein 1, human

TSL 5 BASIC

Gene EWSR1, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EWSR1-222	ENST00000629659		F6UB75	175 aa		12.87	□□□□□ -0.35
EWSR1-222	ENST00000629659	SVIP	Q8NHG7	77 aa		12.87	□□□□□ -0.35
EWSR1-222	ENST00000629659	ZNRF2	Q8NHG8	242 aa		12.87	□□□□□ -0.35
EWSR1-222	ENST00000629659	ZNF688	P0C7X2	276 aa		12.87	□□□□□ -0.35
EWSR1-222	ENST00000629659	ARL3	P36405	182 aa		12.87	□□□□□ -0.35
EWSR1-222	ENST00000629659	PRO1854	Q9UHT4	67 aa		12.87	□□□□□ -0.35
EWSR1-222	ENST00000629659	TGFA	P01135	160 aa		12.86	□□□□□ -0.35
EWSR1-222	ENST00000629659	C19orf54	Q5BKX5	351 aa		12.86	□□□□□ -0.35
EWSR1-222	ENST00000629659	ANKRD29	Q8N6D5	301 aa		12.86	□□□□□ -0.35
EWSR1-222	ENST00000629659	TIMM17A	Q99595	171 aa		12.86	□□□□□ -0.35
EWSR1-222	ENST00000629659	LINC00527	Q9UJ94	153 aa		12.86	□□□□□ -0.35
EWSR1-222	ENST00000629659	FAM223B	A6NKX1	122 aa		12.86	□□□□□ -0.35
EWSR1-222	ENST00000629659	TRBV12-3	P01733	135 aa		12.86	□□□□□ -0.35
EWSR1-222	ENST00000629659	ZNF876P	Q49A33	203 aa		12.86	□□□□□ -0.35
EWSR1-222	ENST00000629659	TMEM170B	Q5T4T1	132 aa		12.86	□□□□□ -0.35
EWSR1-222	ENST00000629659	FAM223A	Q8IWN6	122 aa		12.86	□□□□□ -0.35
EWSR1-222	ENST00000629659	ZFHX3	Q15911	3703 aa		12.85	□□□□□ -0.35
EWSR1-222	ENST00000629659	SPTBN4	Q9H254	2564 aa		12.85	□□□□□ -0.35
EWSR1-222	ENST00000629659	TRAV41	A0A0B4J266	112 aa		12.85	□□□□□ -0.35
EWSR1-222	ENST00000629659	VCY	O14598	125 aa		12.85	□□□□□ -0.35
EWSR1-222	ENST00000629659	SCGB1C2	P0DMR2	95 aa		12.85	□□□□□ -0.35
EWSR1-222	ENST00000629659	SUMO4	Q6EEV6	95 aa		12.85	□□□□□ -0.35
EWSR1-222	ENST00000629659	KIR2DL4	Q99706	377 aa		12.85	□□□□□ -0.35
EWSR1-222	ENST00000629659	JPT2	Q9H910	190 aa		12.85	□□□□□ -0.35
EWSR1-222	ENST00000629659	MUC4	Q99102	2169 aa		12.85	□□□□□ -0.35
EWSR1-222	ENST00000629659	HIVEP3	Q5T1R4	2406 aa		12.85	□□□□□ -0.35
EWSR1-222	ENST00000629659	AKAP6	Q13023	2319 aa		12.85	□□□□□ -0.35
EWSR1-222	ENST00000629659	UCN	P55089	124 aa		12.84	□□□□□ -0.35
EWSR1-222	ENST00000629659		J3QQQ9	107 aa		12.84	□□□□□ -0.35
EWSR1-222	ENST00000629659	ERG28	Q9UKR5	140 aa		12.84	□□□□□ -0.35
EWSR1-222	ENST00000629659	TRBV7-9	A0A0J9YWB2	115 aa		12.83	□□□□□ -0.35
EWSR1-222	ENST00000629659	TMEM219	Q86XT9	240 aa		12.83	□□□□□ -0.35
EWSR1-222	ENST00000629659	UBTD1	Q9HAC8	227 aa		12.83	□□□□□ -0.35
EWSR1-222	ENST00000629659	NDUFA4	O00483	81 aa		12.83	□□□□□ -0.36
EWSR1-222	ENST00000629659	EIF4EBP3	O60516	100 aa	Predicted RBP	12.83	□□□□□ -0.36
EWSR1-222	ENST00000629659	RNF183	Q96D59	192 aa		12.82	□□□□□ -0.36
EWSR1-222	ENST00000629659	SDHAF1	A6NFY7	115 aa		12.82	□□□□□ -0.36
EWSR1-222	ENST00000629659	NPFF	O15130	113 aa		12.82	□□□□□ -0.36
EWSR1-222	ENST00000629659		A4D1N5	150 aa		12.81	□□□□□ -0.36
EWSR1-222	ENST00000629659	RPL11	P62913	178 aa	Known RBP	12.81	□□□□□ -0.36
EWSR1-222	ENST00000629659	CELSR1	Q9NYQ6	3014 aa		12.81	□□□□□ -0.36
EWSR1-222	ENST00000629659	CHD8	Q9HCK8	2581 aa		12.81	□□□□□ -0.36
EWSR1-222	ENST00000629659		A0A087WWL8	130 aa		12.81	□□□□□ -0.36
EWSR1-222	ENST00000629659	TMEM262	E9PQX1	116 aa		12.81	□□□□□ -0.36
EWSR1-222	ENST00000629659	SLC25A20	O43772	301 aa		12.81	□□□□□ -0.36
EWSR1-222	ENST00000629659	LGALS3	P17931	250 aa	Known RBP	12.81	□□□□□ -0.36
EWSR1-222	ENST00000629659	CRIP2	P52943	208 aa	Predicted RBP	12.81	□□□□□ -0.36
EWSR1-222	ENST00000629659	RAX2	Q96IS3	184 aa		12.81	□□□□□ -0.36
EWSR1-222	ENST00000629659	TRBV27	A0A0K0K1C4	114 aa		12.8	□□□□□ -0.36
EWSR1-222	ENST00000629659		M0QXV9	152 aa		12.8	□□□□□ -0.36
EWSR1-222	ENST00000629659	IGHV3-33	P01772	117 aa		12.8	□□□□□ -0.36
EWSR1-222	ENST00000629659	LY6D	Q14210	128 aa		12.8	□□□□□ -0.36
EWSR1-222	ENST00000629659	NCOR2	Q9Y618	2525 aa		12.8	□□□□□ -0.36
EWSR1-222	ENST00000629659	IGKV3-7	A0A075B6H7	116 aa		12.8	□□□□□ -0.36
EWSR1-222	ENST00000629659	KLLN	B2CW77	178 aa		12.8	□□□□□ -0.36
EWSR1-222	ENST00000629659	GATA3	P23771	443 aa		12.8	□□□□□ -0.36
EWSR1-222	ENST00000629659	TMEM263	Q8WUH6	116 aa	Known RBP	12.8	□□□□□ -0.36
EWSR1-222	ENST00000629659		F5H697	171 aa		12.79	□□□□□ -0.36
EWSR1-222	ENST00000629659	TRPT1	Q86TN4	253 aa	Known RBP	12.79	□□□□□ -0.36
EWSR1-222	ENST00000629659	MOB4	Q9Y3A3	225 aa		12.79	□□□□□ -0.36
EWSR1-222	ENST00000629659	ITPR1	Q14643	2758 aa		12.79	□□□□□ -0.36
EWSR1-222	ENST00000629659	TRBV6-5	A0A0K0K1A5	114 aa		12.79	□□□□□ -0.36
EWSR1-222	ENST00000629659		C9JAW5	83 aa		12.79	□□□□□ -0.36
EWSR1-222	ENST00000629659	FAM159A	Q6UWV7	190 aa		12.79	□□□□□ -0.36
EWSR1-222	ENST00000629659	CITED1	Q99966	193 aa		12.78	□□□□□ -0.36
EWSR1-222	ENST00000629659	VPS13C	Q709C8	3753 aa		12.78	□□□□□ -0.36
EWSR1-222	ENST00000629659	TMEM223	A0PJW6	202 aa		12.78	□□□□□ -0.36
EWSR1-222	ENST00000629659	LGALS9	O00182	355 aa		12.78	□□□□□ -0.36
EWSR1-222	ENST00000629659	LEPROT	O15243	131 aa		12.78	□□□□□ -0.36
EWSR1-222	ENST00000629659	ZFAND6	Q6FIF0	208 aa		12.78	□□□□□ -0.36
EWSR1-222	ENST00000629659	OPRPN	Q99935	248 aa	Predicted RBP	12.78	□□□□□ -0.36
EWSR1-222	ENST00000629659	BPESC1	Q9GZL8	116 aa		12.78	□□□□□ -0.36
EWSR1-222	ENST00000629659		A0A0B4J2C4	111 aa		12.77	□□□□□ -0.37
EWSR1-222	ENST00000629659	LMO4	P61968	165 aa		12.77	□□□□□ -0.37
EWSR1-222	ENST00000629659	ANAPC13	Q9BS18	74 aa		12.77	□□□□□ -0.37
EWSR1-222	ENST00000629659		P0DMU3	169 aa		12.76	□□□□□ -0.37
EWSR1-222	ENST00000629659	FAM231A	P0DMU4	169 aa		12.76	□□□□□ -0.37
EWSR1-222	ENST00000629659	FAM231C	P0DMU5	169 aa		12.76	□□□□□ -0.37
EWSR1-222	ENST00000629659	MUSTN1	Q8IVN3	82 aa		12.76	□□□□□ -0.37
EWSR1-222	ENST00000629659	TEX29	Q8N6K0	151 aa		12.76	□□□□□ -0.37
EWSR1-222	ENST00000629659	RHPN1-AS1	Q9BWJ2	59 aa		12.76	□□□□□ -0.37
EWSR1-222	ENST00000629659	ZNF256	Q9Y2P7	627 aa	Predicted RBP	12.76	□□□□□ -0.37
EWSR1-222	ENST00000629659	IGHV1-69	P01742	117 aa		12.76	□□□□□ -0.37
EWSR1-222	ENST00000629659	IGHV3-11	P01762	117 aa		12.76	□□□□□ -0.37
EWSR1-222	ENST00000629659	IGHV3OR16-10	A0A075B7F0	116 aa		12.75	□□□□□ -0.37
EWSR1-222	ENST00000629659	TRAV2	A0A0B4J234	112 aa		12.75	□□□□□ -0.37
EWSR1-222	ENST00000629659		H7C2G1	150 aa		12.74	□□□□□ -0.37
EWSR1-222	ENST00000629659	C19orf84	I3L1E1	186 aa		12.74	□□□□□ -0.37
EWSR1-222	ENST00000629659	ELANE	P08246	267 aa		12.74	□□□□□ -0.37
EWSR1-222	ENST00000629659	ZNF22	P17026	224 aa	Predicted RBP	12.74	□□□□□ -0.37
EWSR1-222	ENST00000629659	SRD5A1	P18405	259 aa		12.74	□□□□□ -0.37
EWSR1-222	ENST00000629659	NSUN5P1	Q3KNT7	163 aa		12.74	□□□□□ -0.37
EWSR1-222	ENST00000629659	TRAV12-3	A0A0B4J271	114 aa		12.73	□□□□□ -0.37
EWSR1-222	ENST00000629659		M0QY20	66 aa		12.73	□□□□□ -0.37
EWSR1-222	ENST00000629659	FAM74A4	Q5TZK3	123 aa		12.73	□□□□□ -0.37
EWSR1-222	ENST00000629659	ABCA2	Q9BZC7	2435 aa		12.73	□□□□□ -0.37
EWSR1-222	ENST00000629659	RHOD	O00212	210 aa		12.73	□□□□□ -0.37
EWSR1-222	ENST00000629659	RHOH	Q15669	191 aa		12.73	□□□□□ -0.37
EWSR1-222	ENST00000629659	USMG5	Q96IX5	58 aa		12.73	□□□□□ -0.37
EWSR1-222	ENST00000629659	IGHV3-64	A0A075B6Q5	118 aa		12.72	□□□□□ -0.37

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