RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 UBE2G2P60604 165 aa7.93□□□□□ -1.14
UPF3B-204ENST00000619445 UFSP1Q6NVU6 142 aa7.93□□□□□ -1.14
UPF3B-204ENST00000619445 ZFP82Q8N141 532 aa7.93□□□□□ -1.14
UPF3B-204ENST00000619445 FAT1Q14517 4588 aa7.93□□□□□ -1.14
UPF3B-204ENST00000619445 MAP1LC3B2A6NCE7 125 aa7.92□□□□□ -1.14
UPF3B-204ENST00000619445 SMR3BP02814 79 aaPredicted RBP7.92□□□□□ -1.14
UPF3B-204ENST00000619445 ZNF726P1Q15940 193 aa7.92□□□□□ -1.14
UPF3B-204ENST00000619445 Q5BKY6 102 aa7.92□□□□□ -1.14
UPF3B-204ENST00000619445 Q8N976 141 aa7.92□□□□□ -1.14
UPF3B-204ENST00000619445 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.92□□□□□ -1.14
UPF3B-204ENST00000619445 ZC2HC1AQ96GY0 325 aa7.92□□□□□ -1.14
UPF3B-204ENST00000619445 SFRP2Q96HF1 295 aa7.92□□□□□ -1.14
UPF3B-204ENST00000619445 MAP1LC3BQ9GZQ8 125 aa7.92□□□□□ -1.14
UPF3B-204ENST00000619445 A0A087WX48 190 aa7.91□□□□□ -1.14
UPF3B-204ENST00000619445 SH2D1AO60880 128 aa7.91□□□□□ -1.14
UPF3B-204ENST00000619445 PLA2G1BP04054 148 aaKnown RBP7.91□□□□□ -1.14
UPF3B-204ENST00000619445 PKIAP61925 76 aa7.91□□□□□ -1.14
UPF3B-204ENST00000619445 RPL36AP83881 106 aaKnown RBP7.91□□□□□ -1.14
UPF3B-204ENST00000619445 ZNF674Q2M3X9 581 aa7.91□□□□□ -1.14
UPF3B-204ENST00000619445 FAM74A4Q5TZK3 123 aa7.91□□□□□ -1.14
UPF3B-204ENST00000619445 RPL36ALQ969Q0 106 aaKnown RBP7.91□□□□□ -1.14
UPF3B-204ENST00000619445 M0R036 132 aa7.9□□□□□ -1.14
UPF3B-204ENST00000619445 LTAP01374 205 aa7.9□□□□□ -1.14
UPF3B-204ENST00000619445 Q0VG73 95 aa7.9□□□□□ -1.14
UPF3B-204ENST00000619445 CST9LP1Q5W188 147 aa7.9□□□□□ -1.14
UPF3B-204ENST00000619445 Q6ZSA8 131 aa7.9□□□□□ -1.14
UPF3B-204ENST00000619445 DAZ4Q86SG3 579 aaKnown RBP7.9□□□□□ -1.14
UPF3B-204ENST00000619445 NIT1Q86X76 327 aa7.9□□□□□ -1.14
UPF3B-204ENST00000619445 C14orf178Q8N769 122 aaPredicted RBP7.9□□□□□ -1.14
UPF3B-204ENST00000619445 DAZ3Q9NR90 486 aaKnown RBP7.9□□□□□ -1.14
UPF3B-204ENST00000619445 TRBV7-3A0A075B6L6 115 aa7.89□□□□□ -1.15
UPF3B-204ENST00000619445 UMAD1C9J7I0 102 aa7.89□□□□□ -1.15
UPF3B-204ENST00000619445 J3QL48 77 aa7.89□□□□□ -1.15
UPF3B-204ENST00000619445 M0R381 172 aa7.89□□□□□ -1.15
UPF3B-204ENST00000619445 CXCL1P09341 107 aa7.89□□□□□ -1.15
UPF3B-204ENST00000619445 AKR1C3P42330 323 aa7.89□□□□□ -1.15
UPF3B-204ENST00000619445 CRIP1P50238 77 aa7.89□□□□□ -1.15
UPF3B-204ENST00000619445 C14orf177Q52M58 125 aa7.89□□□□□ -1.15
UPF3B-204ENST00000619445 SAMD10Q9BYL1 202 aa7.89□□□□□ -1.15
UPF3B-204ENST00000619445 JPT2Q9H910 190 aa7.89□□□□□ -1.15
UPF3B-204ENST00000619445 HERC1Q15751 4861 aa7.89□□□□□ -1.15
UPF3B-204ENST00000619445 GRIFINA4D1Z8 144 aa7.88□□□□□ -1.15
UPF3B-204ENST00000619445 ARPC5O15511 151 aa7.88□□□□□ -1.15
UPF3B-204ENST00000619445 OR10G8Q8NGN5 311 aa7.88□□□□□ -1.15
UPF3B-204ENST00000619445 IGKV2D-24A0A075B6R9 120 aa7.87□□□□□ -1.15
UPF3B-204ENST00000619445 A0A087WWL8 130 aa7.87□□□□□ -1.15
UPF3B-204ENST00000619445 RBFOX3A6NFN3 312 aa7.87□□□□□ -1.15
UPF3B-204ENST00000619445 PFDN1O60925 122 aa7.87□□□□□ -1.15
UPF3B-204ENST00000619445 RAB4BP61018 213 aa7.87□□□□□ -1.15
UPF3B-204ENST00000619445 ZNF345Q14585 488 aa7.87□□□□□ -1.15
UPF3B-204ENST00000619445 RGS21Q2M5E4 152 aa7.87□□□□□ -1.15
UPF3B-204ENST00000619445 TMEM97Q5BJF2 176 aa7.87□□□□□ -1.15
UPF3B-204ENST00000619445 KLK12Q9UKR0 248 aa7.87□□□□□ -1.15
UPF3B-204ENST00000619445 UBE2D3P61077 147 aa7.86□□□□□ -1.15
UPF3B-204ENST00000619445 UBE2D2P62837 147 aa7.86□□□□□ -1.15
UPF3B-204ENST00000619445 EIF5AP63241 154 aaKnown RBP7.86□□□□□ -1.15
UPF3B-204ENST00000619445 ATRAIDQ6UW56 229 aa7.86□□□□□ -1.15
UPF3B-204ENST00000619445 Q8N3U1 123 aa7.86□□□□□ -1.15
UPF3B-204ENST00000619445 ZNF471Q9BX82 626 aaPredicted RBP7.86□□□□□ -1.15
UPF3B-204ENST00000619445 CYTL1Q9NRR1 136 aa7.86□□□□□ -1.15
UPF3B-204ENST00000619445 FAM30AQ9NZY2 134 aa7.86□□□□□ -1.15
UPF3B-204ENST00000619445 MYCBP2O75592 4640 aa7.86□□□□□ -1.15
UPF3B-204ENST00000619445 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.85□□□□□ -1.15
UPF3B-204ENST00000619445 TMSB15BA0A087X1C1 80 aa7.85□□□□□ -1.15
UPF3B-204ENST00000619445 PAGE4O60829 102 aa7.85□□□□□ -1.15
UPF3B-204ENST00000619445 WFDC2Q14508 124 aa7.85□□□□□ -1.15
UPF3B-204ENST00000619445 MBD3L1Q8WWY6 194 aa7.85□□□□□ -1.15
UPF3B-204ENST00000619445 BAALCQ8WXS3 180 aa7.85□□□□□ -1.15
UPF3B-204ENST00000619445 UBE2WQ96B02 151 aa7.85□□□□□ -1.15
UPF3B-204ENST00000619445 C1orf43Q9BWL3 253 aa7.85□□□□□ -1.15
UPF3B-204ENST00000619445 Q9UF83 564 aa7.85□□□□□ -1.15
UPF3B-204ENST00000619445 TRBV6-8A0A0A6YYG3 113 aa7.84□□□□□ -1.15
UPF3B-204ENST00000619445 LECT2O14960 151 aa7.84□□□□□ -1.15
UPF3B-204ENST00000619445 CRPP02741 224 aa7.84□□□□□ -1.15
UPF3B-204ENST00000619445 OR5AL1P0C617 328 aa7.84□□□□□ -1.15
UPF3B-204ENST00000619445 HAMPP81172 84 aa7.84□□□□□ -1.15
UPF3B-204ENST00000619445 ZNF56Q15929 161 aa7.84□□□□□ -1.15
UPF3B-204ENST00000619445 KCNRGQ8N5I3 272 aa7.84□□□□□ -1.15
UPF3B-204ENST00000619445 DEFB104AQ8WTQ1 72 aa7.84□□□□□ -1.15
UPF3B-204ENST00000619445 SFT2D1Q8WV19 159 aa7.84□□□□□ -1.15
UPF3B-204ENST00000619445 A0A0D9SG52 128 aa7.84□□□□□ -1.16
UPF3B-204ENST00000619445 HMSDA8MTL9 139 aa7.84□□□□□ -1.16
UPF3B-204ENST00000619445 TMEM262E9PQX1 116 aa7.84□□□□□ -1.16
UPF3B-204ENST00000619445 G3V3Q6 166 aa7.84□□□□□ -1.16
UPF3B-204ENST00000619445 SMIM17P0DL12 118 aa7.84□□□□□ -1.16
UPF3B-204ENST00000619445 SPANXN1Q5VSR9 72 aa7.84□□□□□ -1.16
UPF3B-204ENST00000619445 PRR27Q6MZM9 219 aa7.84□□□□□ -1.16
UPF3B-204ENST00000619445 BAGE2Q86Y30 109 aa7.84□□□□□ -1.16
UPF3B-204ENST00000619445 LINC00528Q8N1L1 170 aa7.84□□□□□ -1.16
UPF3B-204ENST00000619445 MLST8Q9BVC4 326 aa7.84□□□□□ -1.16
UPF3B-204ENST00000619445 SSBP4Q9BWG4 385 aaPredicted RBP7.84□□□□□ -1.16
UPF3B-204ENST00000619445 DNAH8Q96JB1 4490 aa7.83□□□□□ -1.16
UPF3B-204ENST00000619445 KANTRA0A1W2PQU2 76 aa7.83□□□□□ -1.16
UPF3B-204ENST00000619445 SNAI2O43623 268 aa7.83□□□□□ -1.16
UPF3B-204ENST00000619445 MIAQ16674 131 aa7.83□□□□□ -1.16
UPF3B-204ENST00000619445 FAM213BQ8TBF2 198 aa7.83□□□□□ -1.16
UPF3B-204ENST00000619445 CHAC1Q9BUX1 264 aa7.83□□□□□ -1.16
UPF3B-204ENST00000619445 TEX46H3BTG2 121 aa7.82□□□□□ -1.16
UPF3B-204ENST00000619445 H2AFB1P0C5Y9 115 aa7.82□□□□□ -1.16
UPF3B-204ENST00000619445 OR10AG1Q8NH19 301 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms