RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 HHLA3Q9XRX5 114 aa18.85■□□□□ 0.61
VEGFC-202ENST00000618562 SNRPD3P62318 126 aaKnown RBP18.85■□□□□ 0.61
VEGFC-202ENST00000618562 TSSC4Q9Y5U2 329 aaPredicted RBP18.85■□□□□ 0.61
VEGFC-202ENST00000618562 K7EMI3 77 aa18.84■□□□□ 0.61
VEGFC-202ENST00000618562 DPM2O94777 84 aa18.84■□□□□ 0.61
VEGFC-202ENST00000618562 NXPH4O95158 308 aa18.84■□□□□ 0.61
VEGFC-202ENST00000618562 RNASE3P12724 160 aaKnown RBP18.84■□□□□ 0.61
VEGFC-202ENST00000618562 FOSL1P15407 271 aa18.84■□□□□ 0.61
VEGFC-202ENST00000618562 NMUP48645 174 aa18.84■□□□□ 0.61
VEGFC-202ENST00000618562 AP1S3Q96PC3 154 aa18.84■□□□□ 0.61
VEGFC-202ENST00000618562 HSD52Q0P140 79 aa18.83■□□□□ 0.61
VEGFC-202ENST00000618562 CCL24O00175 119 aa18.83■□□□□ 0.6
VEGFC-202ENST00000618562 SUMO2P61956 95 aaKnown RBP18.83■□□□□ 0.6
VEGFC-202ENST00000618562 ORMDL2Q53FV1 153 aa18.83■□□□□ 0.6
VEGFC-202ENST00000618562 RASL10AQ92737 203 aa18.83■□□□□ 0.6
VEGFC-202ENST00000618562 PROK1P58294 105 aa18.82■□□□□ 0.6
VEGFC-202ENST00000618562 C14orf178Q8N769 122 aaPredicted RBP18.82■□□□□ 0.6
VEGFC-202ENST00000618562 FN1P02751 2386 aaKnown RBP18.82■□□□□ 0.6
VEGFC-202ENST00000618562 SORL1Q92673 2214 aa18.82■□□□□ 0.6
VEGFC-202ENST00000618562 GNRH2O43555 120 aa18.81■□□□□ 0.6
VEGFC-202ENST00000618562 VAMP3Q15836 100 aa18.81■□□□□ 0.6
VEGFC-202ENST00000618562 PCP2Q8IVA1 136 aa18.81■□□□□ 0.6
VEGFC-202ENST00000618562 PPP1R17O96001 155 aa18.81■□□□□ 0.6
VEGFC-202ENST00000618562 ODF3Q96PU9 254 aa18.81■□□□□ 0.6
VEGFC-202ENST00000618562 TCTAP57738 103 aa18.8■□□□□ 0.6
VEGFC-202ENST00000618562 TMEM61Q8N0U2 210 aa18.8■□□□□ 0.6
VEGFC-202ENST00000618562 WNK1Q9H4A3 2382 aa18.8■□□□□ 0.6
VEGFC-202ENST00000618562 POM121L12Q8N7R1 296 aa18.8■□□□□ 0.6
VEGFC-202ENST00000618562 A0A0J9YX75 114 aa18.79■□□□□ 0.6
VEGFC-202ENST00000618562 FAM159AQ6UWV7 190 aa18.79■□□□□ 0.6
VEGFC-202ENST00000618562 C7orf71A4D174 169 aa18.78■□□□□ 0.6
VEGFC-202ENST00000618562 SPRY2O43597 315 aa18.78■□□□□ 0.6
VEGFC-202ENST00000618562 HLA-DRB4P13762 266 aa18.78■□□□□ 0.6
VEGFC-202ENST00000618562 HLA-DRB4X5D2U9 266 aa18.78■□□□□ 0.6
VEGFC-202ENST00000618562 FLNBO75369 2602 aaKnown RBP18.78■□□□□ 0.6
VEGFC-202ENST00000618562 A0A087WX48 190 aa18.78■□□□□ 0.6
VEGFC-202ENST00000618562 A6NDN8 102 aa18.78■□□□□ 0.6
VEGFC-202ENST00000618562 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.78■□□□□ 0.6
VEGFC-202ENST00000618562 DYNLRB2Q8TF09 96 aa18.78■□□□□ 0.6
VEGFC-202ENST00000618562 AGRNO00468 2067 aa18.77■□□□□ 0.6
VEGFC-202ENST00000618562 MGPP08493 103 aa18.77■□□□□ 0.6
VEGFC-202ENST00000618562 DEFB114Q30KQ6 69 aa18.77■□□□□ 0.6
VEGFC-202ENST00000618562 CBY3A6NI87 242 aa18.77■□□□□ 0.59
VEGFC-202ENST00000618562 MRPL35Q9NZE8 188 aaKnown RBP18.77■□□□□ 0.59
VEGFC-202ENST00000618562 HIGD1BQ9P298 99 aa18.77■□□□□ 0.59
VEGFC-202ENST00000618562 TRAV12-1A0A0B4J245 112 aa18.76■□□□□ 0.59
VEGFC-202ENST00000618562 TOMM6Q96B49 74 aa18.76■□□□□ 0.59
VEGFC-202ENST00000618562 RPL39LQ96EH5 51 aaKnown RBP18.76■□□□□ 0.59
VEGFC-202ENST00000618562 IGKV2D-26A0A0A0MRZ7 120 aa18.75■□□□□ 0.59
VEGFC-202ENST00000618562 ADARB2-AS1A8MUL3 147 aa18.75■□□□□ 0.59
VEGFC-202ENST00000618562 PLNP26678 52 aa18.75■□□□□ 0.59
VEGFC-202ENST00000618562 ZC2HC1BQ5TFG8 222 aa18.75■□□□□ 0.59
VEGFC-202ENST00000618562 TRAV2A0A0B4J234 112 aa18.75■□□□□ 0.59
VEGFC-202ENST00000618562 OR4C5Q8NGB2 326 aa18.75■□□□□ 0.59
VEGFC-202ENST00000618562 KIF25-AS1Q9Y6Z4 181 aa18.75■□□□□ 0.59
VEGFC-202ENST00000618562 MUC4Q99102 2169 aa18.74■□□□□ 0.59
VEGFC-202ENST00000618562 CD300EQ496F6 205 aaPredicted RBP18.73■□□□□ 0.59
VEGFC-202ENST00000618562 FOXI2Q6ZQN5 318 aa18.73■□□□□ 0.59
VEGFC-202ENST00000618562 IGKV3-20P01619 116 aa18.72■□□□□ 0.59
VEGFC-202ENST00000618562 RPL32P62910 135 aaKnown RBP18.72■□□□□ 0.59
VEGFC-202ENST00000618562 ERASQ7Z444 233 aa18.72■□□□□ 0.59
VEGFC-202ENST00000618562 GTSCR1Q86UQ5 136 aa18.72■□□□□ 0.59
VEGFC-202ENST00000618562 H3BRM9 83 aa18.72■□□□□ 0.59
VEGFC-202ENST00000618562 CRLF1O75462 422 aa18.72■□□□□ 0.59
VEGFC-202ENST00000618562 LINC00315P59091 139 aa18.72■□□□□ 0.59
VEGFC-202ENST00000618562 KRTAP10-3P60369 221 aa18.72■□□□□ 0.59
VEGFC-202ENST00000618562 SCGB3A1Q96QR1 104 aa18.72■□□□□ 0.59
VEGFC-202ENST00000618562 TRAV12-3A0A0B4J271 114 aa18.71■□□□□ 0.59
VEGFC-202ENST00000618562 H7C1H1 209 aa18.71■□□□□ 0.59
VEGFC-202ENST00000618562 C2CD3Q4AC94 2353 aa18.71■□□□□ 0.59
VEGFC-202ENST00000618562 F8VRH5 84 aa18.7■□□□□ 0.58
VEGFC-202ENST00000618562 DEFB131AP59861 70 aa18.7■□□□□ 0.58
VEGFC-202ENST00000618562 AMMECR1LQ6DCA0 310 aa18.7■□□□□ 0.58
VEGFC-202ENST00000618562 CD7P09564 240 aa18.7■□□□□ 0.58
VEGFC-202ENST00000618562 DUSP14O95147 198 aaKnown RBP18.69■□□□□ 0.58
VEGFC-202ENST00000618562 NSUN5P1Q3KNT7 163 aa18.69■□□□□ 0.58
VEGFC-202ENST00000618562 TRAV8-6A0A0B4J262 113 aa18.69■□□□□ 0.58
VEGFC-202ENST00000618562 K7EP13 123 aa18.69■□□□□ 0.58
VEGFC-202ENST00000618562 CSTL1Q9H114 145 aa18.69■□□□□ 0.58
VEGFC-202ENST00000618562 KNCNA6PVL3 124 aa18.68■□□□□ 0.58
VEGFC-202ENST00000618562 AMTNQ6UX39 209 aa18.68■□□□□ 0.58
VEGFC-202ENST00000618562 C2orf66Q6UXQ4 117 aa18.68■□□□□ 0.58
VEGFC-202ENST00000618562 ZNF256Q9Y2P7 627 aaPredicted RBP18.68■□□□□ 0.58
VEGFC-202ENST00000618562 NEXN-AS1Q8NBZ9 246 aa18.67■□□□□ 0.58
VEGFC-202ENST00000618562 C9orf85Q96MD7 179 aa18.67■□□□□ 0.58
VEGFC-202ENST00000618562 SPAG8Q99932 426 aaPredicted RBP18.67■□□□□ 0.58
VEGFC-202ENST00000618562 C9orf118A6NHY6 69 aa18.67■□□□□ 0.58
VEGFC-202ENST00000618562 MAP6D1Q9H9H5 199 aa18.67■□□□□ 0.58
VEGFC-202ENST00000618562 TRBV25-1A0A075B6N4 114 aa18.66■□□□□ 0.58
VEGFC-202ENST00000618562 LINC01549A6NIU2 74 aa18.66■□□□□ 0.58
VEGFC-202ENST00000618562 CHAC1Q9BUX1 264 aa18.66■□□□□ 0.58
VEGFC-202ENST00000618562 TRAV12-2A0A075B6T6 113 aa18.65■□□□□ 0.58
VEGFC-202ENST00000618562 TRAV25A0A0B4J276 109 aa18.65■□□□□ 0.58
VEGFC-202ENST00000618562 IGHV3-16A0A0C4DH30 117 aa18.65■□□□□ 0.58
VEGFC-202ENST00000618562 CDKN1BP46527 198 aa18.65■□□□□ 0.58
VEGFC-202ENST00000618562 SPINK13Q1W4C9 94 aa18.65■□□□□ 0.58
VEGFC-202ENST00000618562 TTTY13Q9BZ97 58 aa18.65■□□□□ 0.58
VEGFC-202ENST00000618562 CHTOPQ9Y3Y2 248 aaKnown RBP18.65■□□□□ 0.58
VEGFC-202ENST00000618562 SUMO4Q6EEV6 95 aa18.64■□□□□ 0.57
VEGFC-202ENST00000618562 NIPBLQ6KC79 2804 aaeCLIP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms