RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 P01737 135 aa17.8■□□□□ 0.44
VEGFA-226ENST00000611736 OR5AL1P0C617 328 aa17.8■□□□□ 0.44
VEGFA-226ENST00000611736 CEBPGP53567 150 aa17.8■□□□□ 0.44
VEGFA-226ENST00000611736 SSTP61278 116 aa17.8■□□□□ 0.44
VEGFA-226ENST00000611736 SSBP4Q9BWG4 385 aaPredicted RBP17.8■□□□□ 0.44
VEGFA-226ENST00000611736 EIF5A2Q9GZV4 153 aaKnown RBP17.8■□□□□ 0.44
VEGFA-226ENST00000611736 PKHD1P08F94 4074 aa17.79■□□□□ 0.44
VEGFA-226ENST00000611736 CRYGDP07320 174 aa17.79■□□□□ 0.44
VEGFA-226ENST00000611736 RPS20P60866 119 aaKnown RBP17.79■□□□□ 0.44
VEGFA-226ENST00000611736 SPANXN1Q5VSR9 72 aa17.79■□□□□ 0.44
VEGFA-226ENST00000611736 TPPP3Q9BW30 176 aa17.79■□□□□ 0.44
VEGFA-226ENST00000611736 PKD1P98161 4303 aa17.79■□□□□ 0.44
VEGFA-226ENST00000611736 A0A1W2PPQ1 181 aa17.78■□□□□ 0.44
VEGFA-226ENST00000611736 GAGE12JA6NER3 117 aa17.78■□□□□ 0.44
VEGFA-226ENST00000611736 GAGE1Q13065 139 aa17.78■□□□□ 0.44
VEGFA-226ENST00000611736 GAGE4Q13068 117 aa17.78■□□□□ 0.44
VEGFA-226ENST00000611736 GAGE5Q13069 117 aa17.78■□□□□ 0.44
VEGFA-226ENST00000611736 GAGE13Q4V321 117 aa17.78■□□□□ 0.44
VEGFA-226ENST00000611736 WFDC10BQ8IUB3 73 aa17.78■□□□□ 0.44
VEGFA-226ENST00000611736 OCC1Q8TAD7 63 aa17.77■□□□□ 0.44
VEGFA-226ENST00000611736 FAM210AQ96ND0 272 aa17.77■□□□□ 0.44
VEGFA-226ENST00000611736 Q9UF83 564 aa17.77■□□□□ 0.44
VEGFA-226ENST00000611736 K7EN84 100 aa17.76■□□□□ 0.43
VEGFA-226ENST00000611736 TIRAPP58753 221 aa17.76■□□□□ 0.43
VEGFA-226ENST00000611736 TEX261Q6UWH6 196 aa17.76■□□□□ 0.43
VEGFA-226ENST00000611736 FER1L6-AS1Q8NA97 138 aa17.76■□□□□ 0.43
VEGFA-226ENST00000611736 ATP6V0E2Q8NHE4 81 aa17.76■□□□□ 0.43
VEGFA-226ENST00000611736 NUDT10Q8NFP7 164 aa17.75■□□□□ 0.43
VEGFA-226ENST00000611736 NUDT11Q96G61 164 aa17.75■□□□□ 0.43
VEGFA-226ENST00000611736 XKRY2A2RUG3 117 aa17.74■□□□□ 0.43
VEGFA-226ENST00000611736 IGLC6P0CF74 106 aa17.74■□□□□ 0.43
VEGFA-226ENST00000611736 RNASE7Q9H1E1 156 aaKnown RBP17.74■□□□□ 0.43
VEGFA-226ENST00000611736 LY96Q9Y6Y9 160 aa17.74■□□□□ 0.43
VEGFA-226ENST00000611736 A0A1B0GVY2 172 aa17.73■□□□□ 0.43
VEGFA-226ENST00000611736 LINC00694P0DN24 101 aa17.73■□□□□ 0.43
VEGFA-226ENST00000611736 GTSF1LQ9H1H1 148 aa17.73■□□□□ 0.43
VEGFA-226ENST00000611736 DNAH11Q96DT5 4516 aa17.73■□□□□ 0.43
VEGFA-226ENST00000611736 ZNF56Q15929 161 aa17.72■□□□□ 0.43
VEGFA-226ENST00000611736 LINC00315P59091 139 aa17.71■□□□□ 0.43
VEGFA-226ENST00000611736 TNP2Q05952 138 aa17.71■□□□□ 0.43
VEGFA-226ENST00000611736 OR10J3Q5JRS4 329 aa17.71■□□□□ 0.43
VEGFA-226ENST00000611736 RPP21Q9H633 154 aaKnown RBP17.71■□□□□ 0.43
VEGFA-226ENST00000611736 SRP19P09132 144 aaKnown RBP17.7■□□□□ 0.42
VEGFA-226ENST00000611736 AP1S3Q96PC3 154 aa17.7■□□□□ 0.42
VEGFA-226ENST00000611736 SMIM7Q9BQ49 75 aa17.7■□□□□ 0.42
VEGFA-226ENST00000611736 TRAV9-2A0A087WT02 112 aa17.69■□□□□ 0.42
VEGFA-226ENST00000611736 TRAV8-6A0A0B4J262 113 aa17.69■□□□□ 0.42
VEGFA-226ENST00000611736 NDUFS6O75380 124 aaKnown RBP17.69■□□□□ 0.42
VEGFA-226ENST00000611736 DNAH10OSP0CZ25 163 aa17.69■□□□□ 0.42
VEGFA-226ENST00000611736 EVI2AP22794 236 aa17.69■□□□□ 0.42
VEGFA-226ENST00000611736 LELP1Q5T871 98 aa17.69■□□□□ 0.42
VEGFA-226ENST00000611736 DYNC1H1Q14204 4646 aaKnown RBP17.68■□□□□ 0.42
VEGFA-226ENST00000611736 SMIM17P0DL12 118 aa17.68■□□□□ 0.42
VEGFA-226ENST00000611736 RAB4BP61018 213 aa17.68■□□□□ 0.42
VEGFA-226ENST00000611736 CACNG7P62955 275 aa17.68■□□□□ 0.42
VEGFA-226ENST00000611736 LYZL1Q6UWQ5 148 aa17.68■□□□□ 0.42
VEGFA-226ENST00000611736 MSRB1Q9NZV6 116 aa17.68■□□□□ 0.42
VEGFA-226ENST00000611736 IGHV3-38A0A0C4DH36 116 aa17.67■□□□□ 0.42
VEGFA-226ENST00000611736 F5H697 171 aa17.67■□□□□ 0.42
VEGFA-226ENST00000611736 TRBV10-1A0A0K0K1A3 114 aa17.66■□□□□ 0.42
VEGFA-226ENST00000611736 ZNF727A8MUV8 499 aa17.66■□□□□ 0.42
VEGFA-226ENST00000611736 F2Z2F3 143 aa17.66■□□□□ 0.42
VEGFA-226ENST00000611736 BTF3P20290 206 aaKnown RBP17.66■□□□□ 0.42
VEGFA-226ENST00000611736 RPL36AP83881 106 aaKnown RBP17.65■□□□□ 0.42
VEGFA-226ENST00000611736 RPL36ALQ969Q0 106 aaKnown RBP17.65■□□□□ 0.42
VEGFA-226ENST00000611736 TNFRSF18Q9Y5U5 241 aa17.65■□□□□ 0.42
VEGFA-226ENST00000611736 KIF25-AS1Q9Y6Z4 181 aa17.65■□□□□ 0.42
VEGFA-226ENST00000611736 GATCO43716 136 aaKnown RBP17.64■□□□□ 0.41
VEGFA-226ENST00000611736 MGPP08493 103 aa17.63■□□□□ 0.41
VEGFA-226ENST00000611736 CTRLP40313 264 aa17.63■□□□□ 0.41
VEGFA-226ENST00000611736 ERVFC1-1P60608 527 aa17.63■□□□□ 0.41
VEGFA-226ENST00000611736 LINC01556Q5JQF7 62 aa17.63■□□□□ 0.41
VEGFA-226ENST00000611736 TRBV7-3A0A075B6L6 115 aa17.62■□□□□ 0.41
VEGFA-226ENST00000611736 K7EP13 123 aa17.62■□□□□ 0.41
VEGFA-226ENST00000611736 FAM231DQ6ZW35 169 aa17.62■□□□□ 0.41
VEGFA-226ENST00000611736 LINC01551Q86U37 167 aa17.62■□□□□ 0.41
VEGFA-226ENST00000611736 NEXN-AS1Q8NBZ9 246 aa17.62■□□□□ 0.41
VEGFA-226ENST00000611736 C9JQL5 133 aa17.61■□□□□ 0.41
VEGFA-226ENST00000611736 IGHV3-30P01768 117 aa17.61■□□□□ 0.41
VEGFA-226ENST00000611736 IGHV3-33P01772 117 aa17.61■□□□□ 0.41
VEGFA-226ENST00000611736 IGHV3-30-3P0DP02 117 aa17.61■□□□□ 0.41
VEGFA-226ENST00000611736 IGHV3-30-5P0DP03 117 aa17.61■□□□□ 0.41
VEGFA-226ENST00000611736 NTF3P20783 257 aa17.61■□□□□ 0.41
VEGFA-226ENST00000611736 UBE2D3P61077 147 aa17.61■□□□□ 0.41
VEGFA-226ENST00000611736 UBE2D2P62837 147 aa17.61■□□□□ 0.41
VEGFA-226ENST00000611736 SRSF3P84103 164 aaKnown RBP17.61■□□□□ 0.41
VEGFA-226ENST00000611736 C10orf126Q8N4M7 172 aa17.61■□□□□ 0.41
VEGFA-226ENST00000611736 OR10G8Q8NGN5 311 aa17.61■□□□□ 0.41
VEGFA-226ENST00000611736 A0A087WWC5 75 aa17.6■□□□□ 0.41
VEGFA-226ENST00000611736 PEA15Q15121 130 aa17.6■□□□□ 0.41
VEGFA-226ENST00000611736 Q6ZRN7 208 aaPredicted RBP17.6■□□□□ 0.41
VEGFA-226ENST00000611736 GTSF1Q8WW33 167 aa17.6■□□□□ 0.41
VEGFA-226ENST00000611736 TRGC1P0CF51 173 aa17.59■□□□□ 0.41
VEGFA-226ENST00000611736 WDR73Q6P4I2 378 aa17.59■□□□□ 0.41
VEGFA-226ENST00000611736 TWIST1Q15672 202 aa17.58■□□□□ 0.4
VEGFA-226ENST00000611736 NFE4Q86UQ8 179 aa17.58■□□□□ 0.4
VEGFA-226ENST00000611736 A8MWL6 223 aa17.57■□□□□ 0.4
VEGFA-226ENST00000611736 Q8N3U1 123 aa17.57■□□□□ 0.4
VEGFA-226ENST00000611736 CNFNQ9BYD5 112 aa17.57■□□□□ 0.4
VEGFA-226ENST00000611736 TMEM241Q24JQ0 296 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms