RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 DEFB131BA0A096LNP1 70 aa5.41□□□□□ -1.54
MSH6-211ENST00000606499 TRAV10A0A0B4J240 114 aa5.41□□□□□ -1.54
MSH6-211ENST00000606499 A0A1B0GUT8 65 aa5.41□□□□□ -1.54
MSH6-211ENST00000606499 A8MWV9 139 aa5.41□□□□□ -1.54
MSH6-211ENST00000606499 TWIST1Q15672 202 aa5.41□□□□□ -1.54
MSH6-211ENST00000606499 ZFAND6Q6FIF0 208 aa5.41□□□□□ -1.54
MSH6-211ENST00000606499 MRPL54Q6P161 138 aaKnown RBP5.41□□□□□ -1.54
MSH6-211ENST00000606499 C14orf178Q8N769 122 aaPredicted RBP5.41□□□□□ -1.54
MSH6-211ENST00000606499 MUC7Q8TAX7 377 aa5.41□□□□□ -1.54
MSH6-211ENST00000606499 PHLDA1Q8WV24 401 aaPredicted RBP5.41□□□□□ -1.54
MSH6-211ENST00000606499 BORCS7Q96B45 105 aa5.41□□□□□ -1.54
MSH6-211ENST00000606499 AP1S3Q96PC3 154 aa5.41□□□□□ -1.54
MSH6-211ENST00000606499 PLECQ15149 4684 aaKnown RBP5.41□□□□□ -1.54
MSH6-211ENST00000606499 TRGV4A0A0C4DH28 118 aa5.4□□□□□ -1.54
MSH6-211ENST00000606499 F5H768 121 aa5.4□□□□□ -1.54
MSH6-211ENST00000606499 ATP6V1G1O75348 118 aa5.4□□□□□ -1.54
MSH6-211ENST00000606499 CRYGDP07320 174 aa5.4□□□□□ -1.54
MSH6-211ENST00000606499 EVI2AP22794 236 aa5.4□□□□□ -1.54
MSH6-211ENST00000606499 FHL2Q14192 279 aa5.4□□□□□ -1.54
MSH6-211ENST00000606499 UFSP1Q6NVU6 142 aa5.4□□□□□ -1.54
MSH6-211ENST00000606499 WDR73Q6P4I2 378 aa5.4□□□□□ -1.54
MSH6-211ENST00000606499 PGPEP1Q9NXJ5 209 aa5.4□□□□□ -1.54
MSH6-211ENST00000606499 KIF25-AS1Q9Y6Z4 181 aa5.4□□□□□ -1.54
MSH6-211ENST00000606499 URGCP-MRPS24S4R325 110 aa5.4□□□□□ -1.54
MSH6-211ENST00000606499 TRAV26-1A0A087WT03 109 aa5.39□□□□□ -1.55
MSH6-211ENST00000606499 A0A0J9YY99 117 aa5.39□□□□□ -1.55
MSH6-211ENST00000606499 A0A1B0GXF2 115 aa5.39□□□□□ -1.55
MSH6-211ENST00000606499 RHODO00212 210 aa5.39□□□□□ -1.55
MSH6-211ENST00000606499 MGPP08493 103 aa5.39□□□□□ -1.55
MSH6-211ENST00000606499 TRGC1P0CF51 173 aa5.39□□□□□ -1.55
MSH6-211ENST00000606499 CAMPP49913 170 aa5.39□□□□□ -1.55
MSH6-211ENST00000606499 LINC00315P59091 139 aa5.39□□□□□ -1.55
MSH6-211ENST00000606499 RIGQ13278 110 aa5.39□□□□□ -1.55
MSH6-211ENST00000606499 ZNF56Q15929 161 aa5.39□□□□□ -1.55
MSH6-211ENST00000606499 TMEM88Q6PEY1 159 aa5.39□□□□□ -1.55
MSH6-211ENST00000606499 KCNIP4Q6PIL6 250 aa5.39□□□□□ -1.55
MSH6-211ENST00000606499 ZFP2Q6ZN57 461 aa5.39□□□□□ -1.55
MSH6-211ENST00000606499 Q6ZSN1 163 aa5.39□□□□□ -1.55
MSH6-211ENST00000606499 CBLN2Q8IUK8 224 aa5.39□□□□□ -1.55
MSH6-211ENST00000606499 IMMP2LQ96T52 175 aa5.39□□□□□ -1.55
MSH6-211ENST00000606499 TMEM242Q9NWH2 141 aa5.39□□□□□ -1.55
MSH6-211ENST00000606499 DNAH1Q9P2D7 4330 aa5.39□□□□□ -1.55
MSH6-211ENST00000606499 LOC100131303A0A0U1RQF7 123 aa5.38□□□□□ -1.55
MSH6-211ENST00000606499 NUPR2A6NF83 97 aa5.38□□□□□ -1.55
MSH6-211ENST00000606499 IGLL5B9A064 214 aa5.38□□□□□ -1.55
MSH6-211ENST00000606499 SMIM17P0DL12 118 aa5.38□□□□□ -1.55
MSH6-211ENST00000606499 GATA1P15976 413 aaPredicted RBP5.38□□□□□ -1.55
MSH6-211ENST00000606499 S100PP25815 95 aa5.38□□□□□ -1.55
MSH6-211ENST00000606499 CRYBA4P53673 196 aa5.38□□□□□ -1.55
MSH6-211ENST00000606499 HBBP68871 147 aa5.38□□□□□ -1.55
MSH6-211ENST00000606499 CEMP1Q6PRD7 247 aaPredicted RBP5.38□□□□□ -1.55
MSH6-211ENST00000606499 SLC25A29Q8N8R3 303 aa5.38□□□□□ -1.55
MSH6-211ENST00000606499 VSIG2Q96IQ7 327 aa5.38□□□□□ -1.55
MSH6-211ENST00000606499 BTF3L4Q96K17 158 aa5.38□□□□□ -1.55
MSH6-211ENST00000606499 DPH3P1Q9H4G8 78 aa5.38□□□□□ -1.55
MSH6-211ENST00000606499 Q9UF83 564 aa5.38□□□□□ -1.55
MSH6-211ENST00000606499 PRO0255Q9UI72 69 aa5.38□□□□□ -1.55
MSH6-211ENST00000606499 HHLA3Q9XRX5 114 aa5.38□□□□□ -1.55
MSH6-211ENST00000606499 TGIF2-C20orf24A0A0A6YYL0 155 aa5.37□□□□□ -1.55
MSH6-211ENST00000606499 TRAV26-2A0A0B4J265 109 aa5.37□□□□□ -1.55
MSH6-211ENST00000606499 A0A1B0GW15 77 aa5.37□□□□□ -1.55
MSH6-211ENST00000606499 F5H697 171 aa5.37□□□□□ -1.55
MSH6-211ENST00000606499 K7EQD1 137 aa5.37□□□□□ -1.55
MSH6-211ENST00000606499 PAX4O43316 350 aa5.37□□□□□ -1.55
MSH6-211ENST00000606499 SCO1O75880 301 aa5.37□□□□□ -1.55
MSH6-211ENST00000606499 P0DMU3 169 aa5.37□□□□□ -1.55
MSH6-211ENST00000606499 FAM231AP0DMU4 169 aa5.37□□□□□ -1.55
MSH6-211ENST00000606499 FAM231CP0DMU5 169 aa5.37□□□□□ -1.55
MSH6-211ENST00000606499 SMCPP49901 116 aaPredicted RBP5.37□□□□□ -1.55
MSH6-211ENST00000606499 SUMO4Q6EEV6 95 aa5.37□□□□□ -1.55
MSH6-211ENST00000606499 SMIM15Q7Z3B0 74 aa5.37□□□□□ -1.55
MSH6-211ENST00000606499 ATP5L2Q7Z4Y8 100 aa5.37□□□□□ -1.55
MSH6-211ENST00000606499 AMN1Q8IY45 258 aa5.37□□□□□ -1.55
MSH6-211ENST00000606499 TMEM191AQ9H0A3 160 aa5.37□□□□□ -1.55
MSH6-211ENST00000606499 TRAV9-1A0A075B6T8 112 aa5.36□□□□□ -1.55
MSH6-211ENST00000606499 TRBV6-4A0A1B0GX49 114 aa5.36□□□□□ -1.55
MSH6-211ENST00000606499 CIDEAO60543 219 aa5.36□□□□□ -1.55
MSH6-211ENST00000606499 RAB4BP61018 213 aa5.36□□□□□ -1.55
MSH6-211ENST00000606499 ELOBQ15370 118 aa5.36□□□□□ -1.55
MSH6-211ENST00000606499 RHOHQ15669 191 aa5.36□□□□□ -1.55
MSH6-211ENST00000606499 CASC10Q5T4H9 136 aa5.36□□□□□ -1.55
MSH6-211ENST00000606499 GATD1Q8NB37 220 aa5.36□□□□□ -1.55
MSH6-211ENST00000606499 RNF185Q96GF1 192 aa5.36□□□□□ -1.55
MSH6-211ENST00000606499 YPEL4Q96NS1 127 aa5.36□□□□□ -1.55
MSH6-211ENST00000606499 A0A096LPF7 62 aa5.35□□□□□ -1.55
MSH6-211ENST00000606499 SMKR1H3BMG3 65 aa5.35□□□□□ -1.55
MSH6-211ENST00000606499 LCE2BO14633 110 aa5.35□□□□□ -1.55
MSH6-211ENST00000606499 GAS8-AS1O95177 125 aa5.35□□□□□ -1.55
MSH6-211ENST00000606499 NCR2O95944 276 aa5.35□□□□□ -1.55
MSH6-211ENST00000606499 NUDT3O95989 172 aa5.35□□□□□ -1.55
MSH6-211ENST00000606499 S100A8P05109 93 aa5.35□□□□□ -1.55
MSH6-211ENST00000606499 GYPEP15421 78 aa5.35□□□□□ -1.55
MSH6-211ENST00000606499 RAB4AP20338 218 aa5.35□□□□□ -1.55
MSH6-211ENST00000606499 S100A1P23297 94 aa5.35□□□□□ -1.55
MSH6-211ENST00000606499 SLAQ13239 276 aa5.35□□□□□ -1.55
MSH6-211ENST00000606499 TMEM136Q6ZRR5 245 aa5.35□□□□□ -1.55
MSH6-211ENST00000606499 FAM210BQ96KR6 192 aa5.35□□□□□ -1.55
MSH6-211ENST00000606499 SMCO4Q9NRQ5 59 aa5.35□□□□□ -1.55
MSH6-211ENST00000606499 KLK5Q9Y337 293 aaPredicted RBP5.35□□□□□ -1.55
MSH6-211ENST00000606499 TRBV24-1A0A075B6N3 115 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms