RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 HIGD1BQ9P298 99 aa6.86□□□□□ -1.31
CSMD1-216ENST00000602557 ANKRD17O75179 2603 aaKnown RBP6.86□□□□□ -1.31
CSMD1-216ENST00000602557 RAI1Q7Z5J4 1906 aaPredicted RBP6.86□□□□□ -1.31
CSMD1-216ENST00000602557 NDUFA7O95182 113 aa6.86□□□□□ -1.31
CSMD1-216ENST00000602557 FAM110DQ8TAY7 271 aaPredicted RBP6.86□□□□□ -1.31
CSMD1-216ENST00000602557 TPSG1Q9NRR2 321 aa6.86□□□□□ -1.31
CSMD1-216ENST00000602557 PYGO2Q9BRQ0 406 aa6.86□□□□□ -1.31
CSMD1-216ENST00000602557 HRCT1Q6UXD1 115 aa6.86□□□□□ -1.31
CSMD1-216ENST00000602557 LINC01619G3V211 115 aa6.86□□□□□ -1.31
CSMD1-216ENST00000602557 MSMBP08118 114 aa6.86□□□□□ -1.31
CSMD1-216ENST00000602557 TMEM61Q8N0U2 210 aa6.86□□□□□ -1.31
CSMD1-216ENST00000602557 Q8N1Y9 231 aa6.86□□□□□ -1.31
CSMD1-216ENST00000602557 C14orf132Q9NPU4 83 aa6.86□□□□□ -1.31
CSMD1-216ENST00000602557 LGALS9O00182 355 aa6.86□□□□□ -1.31
CSMD1-216ENST00000602557 LINC00694P0DN24 101 aa6.86□□□□□ -1.31
CSMD1-216ENST00000602557 TRBV10-2A0A0K0K1G8 114 aa6.85□□□□□ -1.31
CSMD1-216ENST00000602557 UBE2E1P51965 193 aa6.85□□□□□ -1.31
CSMD1-216ENST00000602557 WISP1O95388 367 aa6.85□□□□□ -1.31
CSMD1-216ENST00000602557 ZFP2Q6ZN57 461 aa6.85□□□□□ -1.31
CSMD1-216ENST00000602557 POLQO75417 2590 aa6.85□□□□□ -1.31
CSMD1-216ENST00000602557 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.85□□□□□ -1.31
CSMD1-216ENST00000602557 ZNF134P52741 427 aa6.85□□□□□ -1.31
CSMD1-216ENST00000602557 WT1-ASQ06250 92 aa6.85□□□□□ -1.31
CSMD1-216ENST00000602557 Q8TCH9 128 aa6.85□□□□□ -1.31
CSMD1-216ENST00000602557 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.85□□□□□ -1.31
CSMD1-216ENST00000602557 IGKV2-29A2NJV5 120 aaPredicted RBP6.85□□□□□ -1.31
CSMD1-216ENST00000602557 C20orf197Q8N268 126 aa6.85□□□□□ -1.31
CSMD1-216ENST00000602557 C17orf77Q96MU5 243 aa6.85□□□□□ -1.31
CSMD1-216ENST00000602557 USP24Q9UPU5 2620 aa6.84□□□□□ -1.31
CSMD1-216ENST00000602557 CFPP27918 469 aa6.84□□□□□ -1.31
CSMD1-216ENST00000602557 TRAV4A0A0B4J268 109 aa6.84□□□□□ -1.31
CSMD1-216ENST00000602557 FAM240AA0A1B0GVK7 77 aa6.84□□□□□ -1.31
CSMD1-216ENST00000602557 PRR25Q96S07 402 aa6.84□□□□□ -1.31
CSMD1-216ENST00000602557 IGHV1-69DA0A0B4J2H0 117 aa6.84□□□□□ -1.31
CSMD1-216ENST00000602557 IGHV1-69P01742 117 aa6.84□□□□□ -1.31
CSMD1-216ENST00000602557 C17orf58Q2M2W7 97 aa6.84□□□□□ -1.31
CSMD1-216ENST00000602557 CHKB-CPT1BH3BT56 60 aa6.84□□□□□ -1.31
CSMD1-216ENST00000602557 Q71RC1 249 aaPredicted RBP6.84□□□□□ -1.31
CSMD1-216ENST00000602557 DYNAPQ8N1N2 210 aa6.84□□□□□ -1.31
CSMD1-216ENST00000602557 NDUFC2-KCTD14E9PQ53 114 aa6.84□□□□□ -1.31
CSMD1-216ENST00000602557 FOXL2NBQ6ZUU3 175 aa6.84□□□□□ -1.31
CSMD1-216ENST00000602557 UPK3BQ9BT76 320 aa6.84□□□□□ -1.31
CSMD1-216ENST00000602557 UQCRQO14949 82 aa6.84□□□□□ -1.31
CSMD1-216ENST00000602557 FUSP35637 526 aaKnown RBP eCLIP6.84□□□□□ -1.31
CSMD1-216ENST00000602557 A0A096LPF7 62 aa6.83□□□□□ -1.32
CSMD1-216ENST00000602557 H3BRN7 92 aa6.83□□□□□ -1.32
CSMD1-216ENST00000602557 Q6ZS92 163 aa6.83□□□□□ -1.32
CSMD1-216ENST00000602557 Q9HAA7 133 aa6.83□□□□□ -1.32
CSMD1-216ENST00000602557 ZNRF2Q8NHG8 242 aa6.83□□□□□ -1.32
CSMD1-216ENST00000602557 IGFBPL1Q8WX77 278 aa6.83□□□□□ -1.32
CSMD1-216ENST00000602557 CGB3P0DN86 165 aa6.83□□□□□ -1.32
CSMD1-216ENST00000602557 TMEM14CQ9P0S9 112 aa6.83□□□□□ -1.32
CSMD1-216ENST00000602557 SLC25A29Q8N8R3 303 aa6.83□□□□□ -1.32
CSMD1-216ENST00000602557 FOXE3Q13461 319 aa6.83□□□□□ -1.32
CSMD1-216ENST00000602557 MP68P56378 58 aa6.82□□□□□ -1.32
CSMD1-216ENST00000602557 C1orf147Q96MC9 270 aaPredicted RBP6.82□□□□□ -1.32
CSMD1-216ENST00000602557 IGF2BP2-AS1Q96M15 143 aa6.82□□□□□ -1.32
CSMD1-216ENST00000602557 NDUFA4O00483 81 aa6.82□□□□□ -1.32
CSMD1-216ENST00000602557 XCL1P47992 114 aa6.82□□□□□ -1.32
CSMD1-216ENST00000602557 ANGP03950 147 aaKnown RBP6.82□□□□□ -1.32
CSMD1-216ENST00000602557 IL15RAQ13261 267 aa6.82□□□□□ -1.32
CSMD1-216ENST00000602557 C8orf31Q8N9H6 132 aa6.82□□□□□ -1.32
CSMD1-216ENST00000602557 CPAMD8Q8IZJ3 1885 aa6.82□□□□□ -1.32
CSMD1-216ENST00000602557 GATA3P23771 443 aa6.81□□□□□ -1.32
CSMD1-216ENST00000602557 LOXP28300 417 aaPredicted RBP6.81□□□□□ -1.32
CSMD1-216ENST00000602557 CGB7P0DN87 165 aa6.81□□□□□ -1.32
CSMD1-216ENST00000602557 LMO1P25800 156 aa6.81□□□□□ -1.32
CSMD1-216ENST00000602557 GTSF1Q8WW33 167 aa6.81□□□□□ -1.32
CSMD1-216ENST00000602557 MSRB1Q9NZV6 116 aa6.81□□□□□ -1.32
CSMD1-216ENST00000602557 C15orf65H3BRN8 121 aa6.81□□□□□ -1.32
CSMD1-216ENST00000602557 IGHV7-4-1A0A0J9YVY3 117 aa6.81□□□□□ -1.32
CSMD1-216ENST00000602557 GNRH2O43555 120 aa6.81□□□□□ -1.32
CSMD1-216ENST00000602557 ATP5G1P05496 136 aa6.81□□□□□ -1.32
CSMD1-216ENST00000602557 Q96MF0 132 aa6.81□□□□□ -1.32
CSMD1-216ENST00000602557 ZNF503-AS2A6NEH8 195 aa6.81□□□□□ -1.32
CSMD1-216ENST00000602557 ODF1Q14990 250 aa6.81□□□□□ -1.32
CSMD1-216ENST00000602557 LINC00643Q86TS7 51 aa6.81□□□□□ -1.32
CSMD1-216ENST00000602557 NDUFA11Q86Y39 141 aa6.81□□□□□ -1.32
CSMD1-216ENST00000602557 CENPVL3A0A0U1RRI6 287 aa6.81□□□□□ -1.32
CSMD1-216ENST00000602557 RHOHQ15669 191 aa6.81□□□□□ -1.32
CSMD1-216ENST00000602557 SNURFQ9Y675 71 aa6.8□□□□□ -1.32
CSMD1-216ENST00000602557 PLA2G5P39877 138 aa6.8□□□□□ -1.32
CSMD1-216ENST00000602557 DIAPH2-AS1Q14236 149 aa6.8□□□□□ -1.32
CSMD1-216ENST00000602557 APOC4P55056 127 aa6.8□□□□□ -1.32
CSMD1-216ENST00000602557 RETNQ9HD89 108 aa6.8□□□□□ -1.32
CSMD1-216ENST00000602557 IGLV3-9A0A075B6K5 115 aa6.8□□□□□ -1.32
CSMD1-216ENST00000602557 RPL39P62891 51 aaKnown RBP6.8□□□□□ -1.32
CSMD1-216ENST00000602557 NOP10Q9NPE3 64 aaKnown RBP6.8□□□□□ -1.32
CSMD1-216ENST00000602557 E9PLD3 99 aa6.8□□□□□ -1.32
CSMD1-216ENST00000602557 SMIM9A6NGZ8 99 aa6.79□□□□□ -1.32
CSMD1-216ENST00000602557 TRBV12-3P01733 135 aa6.79□□□□□ -1.32
CSMD1-216ENST00000602557 VSIG2Q96IQ7 327 aa6.79□□□□□ -1.32
CSMD1-216ENST00000602557 ADAMTS20P59510 1910 aa6.79□□□□□ -1.32
CSMD1-216ENST00000602557 DEFB136Q30KP8 78 aa6.79□□□□□ -1.32
CSMD1-216ENST00000602557 CSDC2Q9Y534 153 aaKnown RBP6.79□□□□□ -1.32
CSMD1-216ENST00000602557 NCR3O14931 201 aa6.79□□□□□ -1.32
CSMD1-216ENST00000602557 LECT2O14960 151 aa6.79□□□□□ -1.32
CSMD1-216ENST00000602557 BUB3O43684 328 aa6.79□□□□□ -1.32
CSMD1-216ENST00000602557 FASNP49327 2511 aaKnown RBP6.79□□□□□ -1.32
CSMD1-216ENST00000602557 SND1-IT1Q9HBX3 110 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms