RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 CRYGDP07320 174 aa11.54□□□□□ -0.56
TRIM28-215ENST00000601150 CEBPGP53567 150 aa11.54□□□□□ -0.56
TRIM28-215ENST00000601150 C6orf223Q8N319 242 aa11.54□□□□□ -0.56
TRIM28-215ENST00000601150 OCC1Q8TAD7 63 aa11.54□□□□□ -0.56
TRIM28-215ENST00000601150 MUC21A0A0G2JKD1 596 aa11.53□□□□□ -0.56
TRIM28-215ENST00000601150 MUC21A0A140T8X8 626 aa11.53□□□□□ -0.56
TRIM28-215ENST00000601150 PRSS29PA6NIE9 313 aa11.53□□□□□ -0.56
TRIM28-215ENST00000601150 GZMBP10144 247 aa11.53□□□□□ -0.56
TRIM28-215ENST00000601150 C14orf178Q8N769 122 aaPredicted RBP11.53□□□□□ -0.56
TRIM28-215ENST00000601150 FER1L6-AS1Q8NA97 138 aa11.53□□□□□ -0.56
TRIM28-215ENST00000601150 NUDT10Q8NFP7 164 aa11.53□□□□□ -0.56
TRIM28-215ENST00000601150 NUDT11Q96G61 164 aa11.53□□□□□ -0.56
TRIM28-215ENST00000601150 KRTAP1-5Q9BYS1 174 aa11.53□□□□□ -0.56
TRIM28-215ENST00000601150 K7EN84 100 aa11.52□□□□□ -0.57
TRIM28-215ENST00000601150 IGLC6P0CF74 106 aa11.52□□□□□ -0.57
TRIM28-215ENST00000601150 ATP6V0E2Q8NHE4 81 aa11.52□□□□□ -0.57
TRIM28-215ENST00000601150 TPPP3Q9BW30 176 aa11.52□□□□□ -0.57
TRIM28-215ENST00000601150 GAGE12JA6NER3 117 aa11.51□□□□□ -0.57
TRIM28-215ENST00000601150 SSTP61278 116 aa11.51□□□□□ -0.57
TRIM28-215ENST00000601150 GAGE1Q13065 139 aa11.51□□□□□ -0.57
TRIM28-215ENST00000601150 GAGE4Q13068 117 aa11.51□□□□□ -0.57
TRIM28-215ENST00000601150 GAGE5Q13069 117 aa11.51□□□□□ -0.57
TRIM28-215ENST00000601150 GAGE13Q4V321 117 aa11.51□□□□□ -0.57
TRIM28-215ENST00000601150 WFDC10BQ8IUB3 73 aa11.51□□□□□ -0.57
TRIM28-215ENST00000601150 SMIM7Q9BQ49 75 aa11.51□□□□□ -0.57
TRIM28-215ENST00000601150 RNASE7Q9H1E1 156 aaKnown RBP11.51□□□□□ -0.57
TRIM28-215ENST00000601150 FRAS1Q86XX4 4008 aa11.51□□□□□ -0.57
TRIM28-215ENST00000601150 F2Z2F3 143 aa11.5□□□□□ -0.57
TRIM28-215ENST00000601150 SRP19P09132 144 aaKnown RBP11.5□□□□□ -0.57
TRIM28-215ENST00000601150 LINC00694P0DN24 101 aa11.5□□□□□ -0.57
TRIM28-215ENST00000601150 BTF3P20290 206 aaKnown RBP11.5□□□□□ -0.57
TRIM28-215ENST00000601150 CACNG7P62955 275 aa11.5□□□□□ -0.57
TRIM28-215ENST00000601150 GTSF1LQ9H1H1 148 aa11.5□□□□□ -0.57
TRIM28-215ENST00000601150 RPP21Q9H633 154 aaKnown RBP11.5□□□□□ -0.57
TRIM28-215ENST00000601150 Q9UF83 564 aa11.5□□□□□ -0.57
TRIM28-215ENST00000601150 LY96Q9Y6Y9 160 aa11.5□□□□□ -0.57
TRIM28-215ENST00000601150 DNAH2Q9P225 4427 aa11.49□□□□□ -0.57
TRIM28-215ENST00000601150 TRAV9-2A0A087WT02 112 aa11.49□□□□□ -0.57
TRIM28-215ENST00000601150 RAB4BP61018 213 aa11.49□□□□□ -0.57
TRIM28-215ENST00000601150 AP1S3Q96PC3 154 aa11.49□□□□□ -0.57
TRIM28-215ENST00000601150 TRAV8-6A0A0B4J262 113 aa11.48□□□□□ -0.57
TRIM28-215ENST00000601150 TRBV10-1A0A0K0K1A3 114 aa11.48□□□□□ -0.57
TRIM28-215ENST00000601150 ZNF727A8MUV8 499 aa11.48□□□□□ -0.57
TRIM28-215ENST00000601150 DNAH10OSP0CZ25 163 aa11.48□□□□□ -0.57
TRIM28-215ENST00000601150 SMIM17P0DL12 118 aa11.48□□□□□ -0.57
TRIM28-215ENST00000601150 ZNF56Q15929 161 aa11.48□□□□□ -0.57
TRIM28-215ENST00000601150 LELP1Q5T871 98 aa11.48□□□□□ -0.57
TRIM28-215ENST00000601150 A0A1B0GVY2 172 aa11.47□□□□□ -0.57
TRIM28-215ENST00000601150 K7EP13 123 aa11.47□□□□□ -0.57
TRIM28-215ENST00000601150 EVI2AP22794 236 aa11.47□□□□□ -0.57
TRIM28-215ENST00000601150 OR10J3Q5JRS4 329 aa11.47□□□□□ -0.57
TRIM28-215ENST00000601150 LYZL1Q6UWQ5 148 aa11.47□□□□□ -0.57
TRIM28-215ENST00000601150 DNAH17Q9UFH2 4485 aa11.46□□□□□ -0.57
TRIM28-215ENST00000601150 IGHV3-38A0A0C4DH36 116 aa11.46□□□□□ -0.57
TRIM28-215ENST00000601150 GATCO43716 136 aaKnown RBP11.46□□□□□ -0.57
TRIM28-215ENST00000601150 CTRLP40313 264 aa11.46□□□□□ -0.57
TRIM28-215ENST00000601150 RPL36AP83881 106 aaKnown RBP11.46□□□□□ -0.57
TRIM28-215ENST00000601150 WDR73Q6P4I2 378 aa11.46□□□□□ -0.57
TRIM28-215ENST00000601150 FAM231DQ6ZW35 169 aa11.46□□□□□ -0.57
TRIM28-215ENST00000601150 RPL36ALQ969Q0 106 aaKnown RBP11.46□□□□□ -0.57
TRIM28-215ENST00000601150 KIF25-AS1Q9Y6Z4 181 aa11.46□□□□□ -0.57
TRIM28-215ENST00000601150 F5H697 171 aa11.45□□□□□ -0.58
TRIM28-215ENST00000601150 LINC00315P59091 139 aa11.45□□□□□ -0.58
TRIM28-215ENST00000601150 ERVFC1-1P60608 527 aa11.45□□□□□ -0.58
TRIM28-215ENST00000601150 PEA15Q15121 130 aa11.45□□□□□ -0.58
TRIM28-215ENST00000601150 LINC01551Q86U37 167 aa11.45□□□□□ -0.58
TRIM28-215ENST00000601150 MSRB1Q9NZV6 116 aa11.45□□□□□ -0.58
TRIM28-215ENST00000601150 TRBV7-3A0A075B6L6 115 aa11.44□□□□□ -0.58
TRIM28-215ENST00000601150 A0A087WWC5 75 aa11.44□□□□□ -0.58
TRIM28-215ENST00000601150 TRGC1P0CF51 173 aa11.44□□□□□ -0.58
TRIM28-215ENST00000601150 TNP2Q05952 138 aa11.44□□□□□ -0.58
TRIM28-215ENST00000601150 FAM74A3Q4VXF1 159 aa11.44□□□□□ -0.58
TRIM28-215ENST00000601150 OR10G8Q8NGN5 311 aa11.44□□□□□ -0.58
TRIM28-215ENST00000601150 SMDT1Q9H4I9 107 aa11.44□□□□□ -0.58
TRIM28-215ENST00000601150 A8MWL6 223 aa11.43□□□□□ -0.58
TRIM28-215ENST00000601150 C9JQL5 133 aa11.43□□□□□ -0.58
TRIM28-215ENST00000601150 NTF3P20783 257 aa11.43□□□□□ -0.58
TRIM28-215ENST00000601150 UBE2D3P61077 147 aa11.43□□□□□ -0.58
TRIM28-215ENST00000601150 UBE2D2P62837 147 aa11.43□□□□□ -0.58
TRIM28-215ENST00000601150 LINC01556Q5JQF7 62 aa11.43□□□□□ -0.58
TRIM28-215ENST00000601150 C10orf126Q8N4M7 172 aa11.43□□□□□ -0.58
TRIM28-215ENST00000601150 CNFNQ9BYD5 112 aa11.43□□□□□ -0.58
TRIM28-215ENST00000601150 FAT2Q9NYQ8 4349 aa11.42□□□□□ -0.58
TRIM28-215ENST00000601150 MGPP08493 103 aa11.42□□□□□ -0.58
TRIM28-215ENST00000601150 SRSF3P84103 164 aaKnown RBP11.42□□□□□ -0.58
TRIM28-215ENST00000601150 TMEM241Q24JQ0 296 aa11.42□□□□□ -0.58
TRIM28-215ENST00000601150 CT83Q5H943 113 aa11.42□□□□□ -0.58
TRIM28-215ENST00000601150 NEXN-AS1Q8NBZ9 246 aa11.42□□□□□ -0.58
TRIM28-215ENST00000601150 GTSF1Q8WW33 167 aa11.42□□□□□ -0.58
TRIM28-215ENST00000601150 RAB14P61106 215 aa11.41□□□□□ -0.58
TRIM28-215ENST00000601150 TWIST1Q15672 202 aa11.41□□□□□ -0.58
TRIM28-215ENST00000601150 NFE4Q86UQ8 179 aa11.41□□□□□ -0.58
TRIM28-215ENST00000601150 DPH3P1Q9H4G8 78 aa11.41□□□□□ -0.58
TRIM28-215ENST00000601150 OSTCQ9NRP0 149 aa11.41□□□□□ -0.58
TRIM28-215ENST00000601150 BIRC6Q9NR09 4857 aa11.41□□□□□ -0.58
TRIM28-215ENST00000601150 Q6ZRN7 208 aaPredicted RBP11.4□□□□□ -0.58
TRIM28-215ENST00000601150 NAT8Q9UHE5 227 aa11.4□□□□□ -0.58
TRIM28-215ENST00000601150 TNFRSF18Q9Y5U5 241 aa11.4□□□□□ -0.58
TRIM28-215ENST00000601150 HECTD4Q9Y4D8 3996 aa11.4□□□□□ -0.59
TRIM28-215ENST00000601150 H7C1H1 209 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms