RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 CT83Q5H943 113 aa9.03□□□□□ -0.96
SRRM1-223ENST00000600523 WDR73Q6P4I2 378 aa9.03□□□□□ -0.96
SRRM1-223ENST00000600523 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.03□□□□□ -0.96
SRRM1-223ENST00000600523 MRPS16Q9Y3D3 137 aaKnown RBP9.03□□□□□ -0.96
SRRM1-223ENST00000600523 LINC00588Q9Y4M8 146 aa9.03□□□□□ -0.96
SRRM1-223ENST00000600523 DYNC2H1Q8NCM8 4307 aaKnown RBP9.03□□□□□ -0.96
SRRM1-223ENST00000600523 MUC21A0A0G2JKD1 596 aa9.02□□□□□ -0.97
SRRM1-223ENST00000600523 MUC21A0A140T8X8 626 aa9.02□□□□□ -0.97
SRRM1-223ENST00000600523 RAB4BP61018 213 aa9.02□□□□□ -0.97
SRRM1-223ENST00000600523 ESRGQ1W209 222 aa9.02□□□□□ -0.97
SRRM1-223ENST00000600523 LYZL1Q6UWQ5 148 aa9.02□□□□□ -0.97
SRRM1-223ENST00000600523 ZNF575Q86XF7 245 aa9.02□□□□□ -0.97
SRRM1-223ENST00000600523 SAMD10Q9BYL1 202 aa9.02□□□□□ -0.97
SRRM1-223ENST00000600523 JPT2Q9H910 190 aa9.02□□□□□ -0.97
SRRM1-223ENST00000600523 OSTCQ9NRP0 149 aa9.02□□□□□ -0.97
SRRM1-223ENST00000600523 IGLV2-18A0A075B6J9 118 aa9.01□□□□□ -0.97
SRRM1-223ENST00000600523 TRBV10-1A0A0K0K1A3 114 aa9.01□□□□□ -0.97
SRRM1-223ENST00000600523 H7C1H1 209 aa9.01□□□□□ -0.97
SRRM1-223ENST00000600523 CRYGDP07320 174 aa9.01□□□□□ -0.97
SRRM1-223ENST00000600523 CTRLP40313 264 aa9.01□□□□□ -0.97
SRRM1-223ENST00000600523 SRSF3P84103 164 aaKnown RBP9.01□□□□□ -0.97
SRRM1-223ENST00000600523 TWIST1Q15672 202 aa9.01□□□□□ -0.97
SRRM1-223ENST00000600523 TTC32Q5I0X7 151 aa9.01□□□□□ -0.97
SRRM1-223ENST00000600523 C14orf178Q8N769 122 aaPredicted RBP9.01□□□□□ -0.97
SRRM1-223ENST00000600523 UPK3BQ9BT76 320 aa9.01□□□□□ -0.97
SRRM1-223ENST00000600523 ALMS1Q8TCU4 4167 aa9□□□□□ -0.97
SRRM1-223ENST00000600523 FAM231BA6NCW3 169 aa9□□□□□ -0.97
SRRM1-223ENST00000600523 C9JQL5 133 aa9□□□□□ -0.97
SRRM1-223ENST00000600523 RPL23P62829 140 aaKnown RBP9□□□□□ -0.97
SRRM1-223ENST00000600523 RPL36AP83881 106 aaKnown RBP9□□□□□ -0.97
SRRM1-223ENST00000600523 UFSP1Q6NVU6 142 aa9□□□□□ -0.97
SRRM1-223ENST00000600523 LYPD5Q6UWN5 251 aa9□□□□□ -0.97
SRRM1-223ENST00000600523 OR10G8Q8NGN5 311 aa9□□□□□ -0.97
SRRM1-223ENST00000600523 ATP6V0E2Q8NHE4 81 aa9□□□□□ -0.97
SRRM1-223ENST00000600523 ZNRF2Q8NHG8 242 aa9□□□□□ -0.97
SRRM1-223ENST00000600523 TSKUQ8WUA8 353 aa9□□□□□ -0.97
SRRM1-223ENST00000600523 RPL36ALQ969Q0 106 aaKnown RBP9□□□□□ -0.97
SRRM1-223ENST00000600523 ISOC2Q96AB3 205 aa9□□□□□ -0.97
SRRM1-223ENST00000600523 GFRA4Q9GZZ7 299 aa9□□□□□ -0.97
SRRM1-223ENST00000600523 Q9H8V8 135 aa9□□□□□ -0.97
SRRM1-223ENST00000600523 TRAV9-2A0A087WT02 112 aa8.99□□□□□ -0.97
SRRM1-223ENST00000600523 TRAV8-6A0A0B4J262 113 aa8.99□□□□□ -0.97
SRRM1-223ENST00000600523 LOC100131303A0A0U1RQF7 123 aa8.99□□□□□ -0.97
SRRM1-223ENST00000600523 M0R2N4 97 aa8.99□□□□□ -0.97
SRRM1-223ENST00000600523 MGPP08493 103 aa8.99□□□□□ -0.97
SRRM1-223ENST00000600523 NTF3P20783 257 aa8.99□□□□□ -0.97
SRRM1-223ENST00000600523 UQCC3Q6UW78 93 aa8.99□□□□□ -0.97
SRRM1-223ENST00000600523 A0A087WWC5 75 aa8.98□□□□□ -0.97
SRRM1-223ENST00000600523 GAGE12JA6NER3 117 aa8.98□□□□□ -0.97
SRRM1-223ENST00000600523 SIVA1O15304 175 aa8.98□□□□□ -0.97
SRRM1-223ENST00000600523 TIRAPP58753 221 aa8.98□□□□□ -0.97
SRRM1-223ENST00000600523 IFITM2Q01629 132 aa8.98□□□□□ -0.97
SRRM1-223ENST00000600523 PNRC1Q12796 327 aaPredicted RBP8.98□□□□□ -0.97
SRRM1-223ENST00000600523 GAGE1Q13065 139 aa8.98□□□□□ -0.97
SRRM1-223ENST00000600523 GAGE4Q13068 117 aa8.98□□□□□ -0.97
SRRM1-223ENST00000600523 GAGE5Q13069 117 aa8.98□□□□□ -0.97
SRRM1-223ENST00000600523 GAGE13Q4V321 117 aa8.98□□□□□ -0.97
SRRM1-223ENST00000600523 PGLYRP4Q96LB8 373 aa8.98□□□□□ -0.97
SRRM1-223ENST00000600523 DPH3P1Q9H4G8 78 aa8.98□□□□□ -0.97
SRRM1-223ENST00000600523 PLECQ15149 4684 aaKnown RBP8.98□□□□□ -0.97
SRRM1-223ENST00000600523 KMT2CQ8NEZ4 4911 aaKnown RBP8.97□□□□□ -0.97
SRRM1-223ENST00000600523 NACAE9PAV3 2078 aa8.97□□□□□ -0.97
SRRM1-223ENST00000600523 NBDYA0A0U1RRE5 68 aa8.97□□□□□ -0.97
SRRM1-223ENST00000600523 FOXA3P55318 350 aaPredicted RBP8.97□□□□□ -0.97
SRRM1-223ENST00000600523 OR10J3Q5JRS4 329 aa8.97□□□□□ -0.97
SRRM1-223ENST00000600523 Q6ZSN1 163 aa8.97□□□□□ -0.97
SRRM1-223ENST00000600523 GTSF1Q8WW33 167 aa8.97□□□□□ -0.97
SRRM1-223ENST00000600523 CNFNQ9BYD5 112 aa8.97□□□□□ -0.97
SRRM1-223ENST00000600523 GTSF1LQ9H1H1 148 aa8.97□□□□□ -0.97
SRRM1-223ENST00000600523 NAT8BQ9UHF3 227 aa8.97□□□□□ -0.97
SRRM1-223ENST00000600523 TRBV7-3A0A075B6L6 115 aa8.96□□□□□ -0.98
SRRM1-223ENST00000600523 A0A1B0GUT8 65 aa8.96□□□□□ -0.98
SRRM1-223ENST00000600523 HIGD1CA8MV81 97 aa8.96□□□□□ -0.98
SRRM1-223ENST00000600523 K7EP13 123 aa8.96□□□□□ -0.98
SRRM1-223ENST00000600523 PPP1R2P9O14990 202 aa8.96□□□□□ -0.98
SRRM1-223ENST00000600523 EVI2AP22794 236 aa8.96□□□□□ -0.98
SRRM1-223ENST00000600523 MSRB1Q9NZV6 116 aa8.96□□□□□ -0.98
SRRM1-223ENST00000600523 RIGQ13278 110 aa8.95□□□□□ -0.98
SRRM1-223ENST00000600523 LELP1Q5T871 98 aa8.95□□□□□ -0.98
SRRM1-223ENST00000600523 C1orf134Q5TEV5 83 aa8.95□□□□□ -0.98
SRRM1-223ENST00000600523 TNFRSF18Q9Y5U5 241 aa8.95□□□□□ -0.98
SRRM1-223ENST00000600523 V9GYV3 84 aa8.95□□□□□ -0.98
SRRM1-223ENST00000600523 MT-ND4LP03901 98 aa8.94□□□□□ -0.98
SRRM1-223ENST00000600523 TMEM97Q5BJF2 176 aa8.94□□□□□ -0.98
SRRM1-223ENST00000600523 KCNIP4Q6PIL6 250 aa8.94□□□□□ -0.98
SRRM1-223ENST00000600523 COMMD7Q86VX2 200 aa8.94□□□□□ -0.98
SRRM1-223ENST00000600523 DNAJC30Q96LL9 226 aa8.94□□□□□ -0.98
SRRM1-223ENST00000600523 KIF25-AS1Q9Y6Z4 181 aa8.94□□□□□ -0.98
SRRM1-223ENST00000600523 DNAH1Q9P2D7 4330 aa8.93□□□□□ -0.98
SRRM1-223ENST00000600523 F8W036 122 aa8.93□□□□□ -0.98
SRRM1-223ENST00000600523 S100A8P05109 93 aa8.93□□□□□ -0.98
SRRM1-223ENST00000600523 BTF3P20290 206 aaKnown RBP8.93□□□□□ -0.98
SRRM1-223ENST00000600523 Q6ZR54 194 aa8.93□□□□□ -0.98
SRRM1-223ENST00000600523 LINC00336Q6ZUF6 198 aa8.93□□□□□ -0.98
SRRM1-223ENST00000600523 DAZ4Q86SG3 579 aaKnown RBP8.93□□□□□ -0.98
SRRM1-223ENST00000600523 C10orf126Q8N4M7 172 aa8.93□□□□□ -0.98
SRRM1-223ENST00000600523 LYSTQ99698 3801 aa8.93□□□□□ -0.98
SRRM1-223ENST00000600523 DAZ3Q9NR90 486 aaKnown RBP8.93□□□□□ -0.98
SRRM1-223ENST00000600523 URGCP-MRPS24S4R325 110 aa8.93□□□□□ -0.98
SRRM1-223ENST00000600523 IGHV3-38A0A0C4DH36 116 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms