RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 ESRGQ1W209 222 aa9.53□□□□□ -0.88
SCAF1-203ENST00000598359 COA6Q5JTJ3 125 aaKnown RBP9.53□□□□□ -0.88
SCAF1-203ENST00000598359 ZFP30Q9Y2G7 519 aa9.53□□□□□ -0.88
SCAF1-203ENST00000598359 RBAKDNA6NC62 111 aa9.52□□□□□ -0.89
SCAF1-203ENST00000598359 GATCO43716 136 aaKnown RBP9.52□□□□□ -0.89
SCAF1-203ENST00000598359 RPL19P84098 196 aaKnown RBP9.52□□□□□ -0.89
SCAF1-203ENST00000598359 FABP9Q0Z7S8 132 aa9.52□□□□□ -0.89
SCAF1-203ENST00000598359 GOLT1AQ6ZVE7 132 aa9.52□□□□□ -0.89
SCAF1-203ENST00000598359 COX8CQ7Z4L0 72 aa9.52□□□□□ -0.89
SCAF1-203ENST00000598359 NHLRC2Q8NBF2 726 aa9.52□□□□□ -0.89
SCAF1-203ENST00000598359 NUDT10Q8NFP7 164 aa9.52□□□□□ -0.89
SCAF1-203ENST00000598359 NUDT11Q96G61 164 aa9.52□□□□□ -0.89
SCAF1-203ENST00000598359 KRTAP1-5Q9BYS1 174 aa9.52□□□□□ -0.89
SCAF1-203ENST00000598359 MDFICQ9P1T7 246 aa9.52□□□□□ -0.89
SCAF1-203ENST00000598359 A0A096LPF7 62 aa9.51□□□□□ -0.89
SCAF1-203ENST00000598359 TRAV8-1A0A0A6YYK1 113 aa9.51□□□□□ -0.89
SCAF1-203ENST00000598359 S100A8P05109 93 aa9.51□□□□□ -0.89
SCAF1-203ENST00000598359 TNP2Q05952 138 aa9.51□□□□□ -0.89
SCAF1-203ENST00000598359 SMUG1Q53HV7 270 aa9.51□□□□□ -0.89
SCAF1-203ENST00000598359 RASL11AQ6T310 242 aa9.51□□□□□ -0.89
SCAF1-203ENST00000598359 ZNF575Q86XF7 245 aa9.51□□□□□ -0.89
SCAF1-203ENST00000598359 Q9H8V8 135 aa9.51□□□□□ -0.89
SCAF1-203ENST00000598359 NAGKQ9UJ70 344 aa9.51□□□□□ -0.89
SCAF1-203ENST00000598359 TRBV7-9A0A0J9YWB2 115 aa9.5□□□□□ -0.89
SCAF1-203ENST00000598359 MT-ND6P03923 174 aa9.5□□□□□ -0.89
SCAF1-203ENST00000598359 ZNF415Q09FC8 603 aa9.5□□□□□ -0.89
SCAF1-203ENST00000598359 C6orf223Q8N319 242 aa9.5□□□□□ -0.89
SCAF1-203ENST00000598359 TSKUQ8WUA8 353 aa9.5□□□□□ -0.89
SCAF1-203ENST00000598359 SGK494Q96LW2 274 aa9.5□□□□□ -0.89
SCAF1-203ENST00000598359 C18orf15Q96N68 181 aa9.5□□□□□ -0.89
SCAF1-203ENST00000598359 GNB1LQ9BYB4 327 aa9.5□□□□□ -0.89
SCAF1-203ENST00000598359 GFRA4Q9GZZ7 299 aa9.5□□□□□ -0.89
SCAF1-203ENST00000598359 PSG8Q9UQ74 426 aa9.5□□□□□ -0.89
SCAF1-203ENST00000598359 FAM231BA6NCW3 169 aa9.49□□□□□ -0.89
SCAF1-203ENST00000598359 H3BNG1 76 aa9.49□□□□□ -0.89
SCAF1-203ENST00000598359 PAX4O43316 350 aa9.49□□□□□ -0.89
SCAF1-203ENST00000598359 NDUFA6P56556 154 aa9.49□□□□□ -0.89
SCAF1-203ENST00000598359 Q6AWC8 147 aa9.49□□□□□ -0.89
SCAF1-203ENST00000598359 WDR73Q6P4I2 378 aa9.49□□□□□ -0.89
SCAF1-203ENST00000598359 RPP21Q9H633 154 aaKnown RBP9.49□□□□□ -0.89
SCAF1-203ENST00000598359 TRAPPC1Q9Y5R8 145 aa9.49□□□□□ -0.89
SCAF1-203ENST00000598359 GNRH2O43555 120 aa9.48□□□□□ -0.89
SCAF1-203ENST00000598359 FAM159AQ6UWV7 190 aa9.48□□□□□ -0.89
SCAF1-203ENST00000598359 PRNTQ86SH4 94 aa9.48□□□□□ -0.89
SCAF1-203ENST00000598359 LINC00518Q8N0U6 118 aa9.48□□□□□ -0.89
SCAF1-203ENST00000598359 C8orf49Q96NF6 230 aa9.48□□□□□ -0.89
SCAF1-203ENST00000598359 NAT8BQ9UHF3 227 aa9.48□□□□□ -0.89
SCAF1-203ENST00000598359 MRPS16Q9Y3D3 137 aaKnown RBP9.48□□□□□ -0.89
SCAF1-203ENST00000598359 LENEPQ9Y5L5 61 aa9.48□□□□□ -0.89
SCAF1-203ENST00000598359 A8MWL6 223 aa9.47□□□□□ -0.89
SCAF1-203ENST00000598359 P01737 135 aa9.47□□□□□ -0.89
SCAF1-203ENST00000598359 FHL2Q14192 279 aa9.47□□□□□ -0.89
SCAF1-203ENST00000598359 PRR27Q6MZM9 219 aa9.47□□□□□ -0.89
SCAF1-203ENST00000598359 ATP5L2Q7Z4Y8 100 aa9.47□□□□□ -0.89
SCAF1-203ENST00000598359 HIST3H2BBQ8N257 126 aa9.47□□□□□ -0.89
SCAF1-203ENST00000598359 ZNF479Q96JC4 524 aa9.47□□□□□ -0.89
SCAF1-203ENST00000598359 UPK3BQ9BT76 320 aa9.47□□□□□ -0.89
SCAF1-203ENST00000598359 IFITM10A6NMD0 228 aa9.46□□□□□ -0.9
SCAF1-203ENST00000598359 HLA-DQA1P01909 254 aa9.46□□□□□ -0.9
SCAF1-203ENST00000598359 AKR1D1P51857 326 aa9.46□□□□□ -0.9
SCAF1-203ENST00000598359 CRYBA4P53673 196 aa9.46□□□□□ -0.9
SCAF1-203ENST00000598359 SAPCD1Q5SSQ6 148 aa9.46□□□□□ -0.9
SCAF1-203ENST00000598359 TMEM136Q6ZRR5 245 aa9.46□□□□□ -0.9
SCAF1-203ENST00000598359 ZC2HC1AQ96GY0 325 aa9.46□□□□□ -0.9
SCAF1-203ENST00000598359 ICOSQ9Y6W8 199 aa9.46□□□□□ -0.9
SCAF1-203ENST00000598359 TRGV11A0A075B6L2 103 aa9.45□□□□□ -0.9
SCAF1-203ENST00000598359 TRGV4A0A0C4DH28 118 aa9.45□□□□□ -0.9
SCAF1-203ENST00000598359 A0A1B0GXF2 115 aa9.45□□□□□ -0.9
SCAF1-203ENST00000598359 SMIM6P0DI80 62 aa9.45□□□□□ -0.9
SCAF1-203ENST00000598359 FOXA3P55318 350 aaPredicted RBP9.45□□□□□ -0.9
SCAF1-203ENST00000598359 NUP35Q8NFH5 326 aa9.45□□□□□ -0.9
SCAF1-203ENST00000598359 DAZAP1Q96EP5 407 aaKnown RBP9.45□□□□□ -0.9
SCAF1-203ENST00000598359 MRPL18Q9H0U6 180 aaKnown RBP9.45□□□□□ -0.9
SCAF1-203ENST00000598359 PRO0255Q9UI72 69 aa9.45□□□□□ -0.9
SCAF1-203ENST00000598359 HHLA3Q9XRX5 114 aa9.45□□□□□ -0.9
SCAF1-203ENST00000598359 HERC1Q15751 4861 aa9.45□□□□□ -0.9
SCAF1-203ENST00000598359 HSPG2P98160 4391 aa9.45□□□□□ -0.9
SCAF1-203ENST00000598359 TRAV21A0A0B4J279 112 aa9.44□□□□□ -0.9
SCAF1-203ENST00000598359 IGHV3-16A0A0C4DH30 117 aa9.44□□□□□ -0.9
SCAF1-203ENST00000598359 ZNF80P51504 273 aaPredicted RBP9.44□□□□□ -0.9
SCAF1-203ENST00000598359 TDRG1Q3Y452 100 aa9.44□□□□□ -0.9
SCAF1-203ENST00000598359 TTC32Q5I0X7 151 aa9.44□□□□□ -0.9
SCAF1-203ENST00000598359 SPXQ9BT56 116 aa9.44□□□□□ -0.9
SCAF1-203ENST00000598359 C11orf21Q9P2W6 132 aa9.44□□□□□ -0.9
SCAF1-203ENST00000598359 XKRY2A2RUG3 117 aa9.43□□□□□ -0.9
SCAF1-203ENST00000598359 HIGD1CA8MV81 97 aa9.43□□□□□ -0.9
SCAF1-203ENST00000598359 NXPH4O95158 308 aa9.43□□□□□ -0.9
SCAF1-203ENST00000598359 CRIP1P50238 77 aa9.43□□□□□ -0.9
SCAF1-203ENST00000598359 GTSF1Q8WW33 167 aa9.43□□□□□ -0.9
SCAF1-203ENST00000598359 RASL10AQ92737 203 aa9.43□□□□□ -0.9
SCAF1-203ENST00000598359 MRPL54Q6P161 138 aaKnown RBP9.42□□□□□ -0.9
SCAF1-203ENST00000598359 GATD1Q8NB37 220 aa9.42□□□□□ -0.9
SCAF1-203ENST00000598359 OR2D3Q8NGH3 330 aa9.42□□□□□ -0.9
SCAF1-203ENST00000598359 LRP1BQ9NZR2 4599 aa9.42□□□□□ -0.9
SCAF1-203ENST00000598359 LOC100131303A0A0U1RQF7 123 aa9.41□□□□□ -0.9
SCAF1-203ENST00000598359 C16orf90A8MZG2 172 aa9.41□□□□□ -0.9
SCAF1-203ENST00000598359 K7EQD1 137 aa9.41□□□□□ -0.9
SCAF1-203ENST00000598359 M0R2P5 195 aa9.41□□□□□ -0.9
SCAF1-203ENST00000598359 SIVA1O15304 175 aa9.41□□□□□ -0.9
SCAF1-203ENST00000598359 ESDP10768 282 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms