RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 C9JQL5 133 aa12.46□□□□□ -0.41
IRF3-216ENST00000597180 PEA15Q15121 130 aa12.46□□□□□ -0.41
IRF3-216ENST00000597180 SPANXN1Q5VSR9 72 aa12.46□□□□□ -0.41
IRF3-216ENST00000597180 FAM231DQ6ZW35 169 aa12.46□□□□□ -0.41
IRF3-216ENST00000597180 A0A087WWL8 130 aa12.45□□□□□ -0.42
IRF3-216ENST00000597180 M0R2N4 97 aa12.45□□□□□ -0.42
IRF3-216ENST00000597180 SRSF3P84103 164 aaKnown RBP12.45□□□□□ -0.42
IRF3-216ENST00000597180 FAM74A3Q4VXF1 159 aa12.45□□□□□ -0.42
IRF3-216ENST00000597180 FAM74A4Q5TZK3 123 aa12.45□□□□□ -0.42
IRF3-216ENST00000597180 LINC01551Q86U37 167 aa12.45□□□□□ -0.42
IRF3-216ENST00000597180 Q9H8V8 135 aa12.45□□□□□ -0.42
IRF3-216ENST00000597180 MUC21A0A0G2JKD1 596 aa12.44□□□□□ -0.42
IRF3-216ENST00000597180 MUC21A0A140T8X8 626 aa12.44□□□□□ -0.42
IRF3-216ENST00000597180 A0A1W2PPQ1 181 aa12.44□□□□□ -0.42
IRF3-216ENST00000597180 F2Z2F3 143 aa12.44□□□□□ -0.42
IRF3-216ENST00000597180 NBDYA0A0U1RRE5 68 aa12.43□□□□□ -0.42
IRF3-216ENST00000597180 LINC00694P0DN24 101 aa12.43□□□□□ -0.42
IRF3-216ENST00000597180 CTRLP40313 264 aa12.43□□□□□ -0.42
IRF3-216ENST00000597180 TIRAPP58753 221 aa12.43□□□□□ -0.42
IRF3-216ENST00000597180 RAB14P61106 215 aa12.43□□□□□ -0.42
IRF3-216ENST00000597180 CACNG7P62955 275 aa12.43□□□□□ -0.42
IRF3-216ENST00000597180 C14orf178Q8N769 122 aaPredicted RBP12.43□□□□□ -0.42
IRF3-216ENST00000597180 LYZL1Q6UWQ5 148 aa12.42□□□□□ -0.42
IRF3-216ENST00000597180 TPPP3Q9BW30 176 aa12.42□□□□□ -0.42
IRF3-216ENST00000597180 GATCO43716 136 aaKnown RBP12.41□□□□□ -0.42
IRF3-216ENST00000597180 ERVFC1-1P60608 527 aa12.41□□□□□ -0.42
IRF3-216ENST00000597180 RAB4BP61018 213 aa12.41□□□□□ -0.42
IRF3-216ENST00000597180 CT83Q5H943 113 aa12.41□□□□□ -0.42
IRF3-216ENST00000597180 WDR73Q6P4I2 378 aa12.41□□□□□ -0.42
IRF3-216ENST00000597180 AP1S3Q96PC3 154 aa12.41□□□□□ -0.42
IRF3-216ENST00000597180 CNFNQ9BYD5 112 aa12.41□□□□□ -0.42
IRF3-216ENST00000597180 KIF25-AS1Q9Y6Z4 181 aa12.41□□□□□ -0.42
IRF3-216ENST00000597180 SSTP61278 116 aa12.4□□□□□ -0.42
IRF3-216ENST00000597180 IFITM2Q01629 132 aa12.4□□□□□ -0.42
IRF3-216ENST00000597180 TMEM241Q24JQ0 296 aa12.4□□□□□ -0.42
IRF3-216ENST00000597180 CLLU1Q5K131 121 aa12.4□□□□□ -0.42
IRF3-216ENST00000597180 OSTCQ9NRP0 149 aa12.4□□□□□ -0.42
IRF3-216ENST00000597180 Q9UF83 564 aa12.4□□□□□ -0.42
IRF3-216ENST00000597180 TRBV10-1A0A0K0K1A3 114 aa12.39□□□□□ -0.43
IRF3-216ENST00000597180 A8MWL6 223 aa12.39□□□□□ -0.43
IRF3-216ENST00000597180 SIVA1O15304 175 aa12.39□□□□□ -0.43
IRF3-216ENST00000597180 TTC32Q5I0X7 151 aa12.39□□□□□ -0.43
IRF3-216ENST00000597180 ATP6V0E2Q8NHE4 81 aa12.39□□□□□ -0.43
IRF3-216ENST00000597180 GTSF1Q8WW33 167 aa12.39□□□□□ -0.43
IRF3-216ENST00000597180 MSRB1Q9NZV6 116 aa12.39□□□□□ -0.43
IRF3-216ENST00000597180 NAT8Q9UHE5 227 aa12.39□□□□□ -0.43
IRF3-216ENST00000597180 GAGE12JA6NER3 117 aa12.38□□□□□ -0.43
IRF3-216ENST00000597180 SMIM17P0DL12 118 aa12.38□□□□□ -0.43
IRF3-216ENST00000597180 LINC00315P59091 139 aa12.38□□□□□ -0.43
IRF3-216ENST00000597180 RPL23P62829 140 aaKnown RBP12.38□□□□□ -0.43
IRF3-216ENST00000597180 GAGE1Q13065 139 aa12.38□□□□□ -0.43
IRF3-216ENST00000597180 GAGE4Q13068 117 aa12.38□□□□□ -0.43
IRF3-216ENST00000597180 GAGE5Q13069 117 aa12.38□□□□□ -0.43
IRF3-216ENST00000597180 ZNF56Q15929 161 aa12.38□□□□□ -0.43
IRF3-216ENST00000597180 GAGE13Q4V321 117 aa12.38□□□□□ -0.43
IRF3-216ENST00000597180 ISOC2Q96AB3 205 aa12.38□□□□□ -0.43
IRF3-216ENST00000597180 KRTAP1-5Q9BYS1 174 aa12.38□□□□□ -0.43
IRF3-216ENST00000597180 GTSF1LQ9H1H1 148 aa12.38□□□□□ -0.43
IRF3-216ENST00000597180 DNAH10Q8IVF4 4471 aa12.37□□□□□ -0.43
IRF3-216ENST00000597180 RTL8CO15255 209 aa12.37□□□□□ -0.43
IRF3-216ENST00000597180 TRGC1P0CF51 173 aa12.37□□□□□ -0.43
IRF3-216ENST00000597180 NTF3P20783 257 aa12.37□□□□□ -0.43
IRF3-216ENST00000597180 SOHLH1Q5JUK2 328 aa12.37□□□□□ -0.43
IRF3-216ENST00000597180 FRAS1Q86XX4 4008 aa12.37□□□□□ -0.43
IRF3-216ENST00000597180 FOXA3P55318 350 aaPredicted RBP12.36□□□□□ -0.43
IRF3-216ENST00000597180 C1orf134Q5TEV5 83 aa12.36□□□□□ -0.43
IRF3-216ENST00000597180 WFDC10BQ8IUB3 73 aa12.36□□□□□ -0.43
IRF3-216ENST00000597180 OR10G8Q8NGN5 311 aa12.36□□□□□ -0.43
IRF3-216ENST00000597180 ADIRFQ15847 76 aa12.35□□□□□ -0.43
IRF3-216ENST00000597180 LELP1Q5T871 98 aa12.35□□□□□ -0.43
IRF3-216ENST00000597180 LINC00336Q6ZUF6 198 aa12.35□□□□□ -0.43
IRF3-216ENST00000597180 C15orf54Q8N8G6 183 aa12.35□□□□□ -0.43
IRF3-216ENST00000597180 TSKUQ8WUA8 353 aa12.35□□□□□ -0.43
IRF3-216ENST00000597180 GFRA4Q9GZZ7 299 aa12.35□□□□□ -0.43
IRF3-216ENST00000597180 V9GYV3 84 aa12.35□□□□□ -0.43
IRF3-216ENST00000597180 TRBV7-3A0A075B6L6 115 aa12.34□□□□□ -0.43
IRF3-216ENST00000597180 FAM231BA6NCW3 169 aa12.34□□□□□ -0.43
IRF3-216ENST00000597180 F5H697 171 aa12.34□□□□□ -0.43
IRF3-216ENST00000597180 DNAH10OSP0CZ25 163 aa12.34□□□□□ -0.43
IRF3-216ENST00000597180 EVI2AP22794 236 aa12.34□□□□□ -0.43
IRF3-216ENST00000597180 RPL36AP83881 106 aaKnown RBP12.34□□□□□ -0.43
IRF3-216ENST00000597180 C6orf223Q8N319 242 aa12.34□□□□□ -0.43
IRF3-216ENST00000597180 RPL36ALQ969Q0 106 aaKnown RBP12.34□□□□□ -0.43
IRF3-216ENST00000597180 BTF3P20290 206 aaKnown RBP12.33□□□□□ -0.44
IRF3-216ENST00000597180 UBE2D3P61077 147 aa12.33□□□□□ -0.44
IRF3-216ENST00000597180 UBE2D2P62837 147 aa12.33□□□□□ -0.44
IRF3-216ENST00000597180 TWIST1Q15672 202 aa12.33□□□□□ -0.44
IRF3-216ENST00000597180 NEXN-AS1Q8NBZ9 246 aa12.33□□□□□ -0.44
IRF3-216ENST00000597180 DPH3P1Q9H4G8 78 aa12.33□□□□□ -0.44
IRF3-216ENST00000597180 TRAV8-6A0A0B4J262 113 aa12.32□□□□□ -0.44
IRF3-216ENST00000597180 K7EP13 123 aa12.32□□□□□ -0.44
IRF3-216ENST00000597180 MGPP08493 103 aa12.32□□□□□ -0.44
IRF3-216ENST00000597180 PGLYRP4Q96LB8 373 aa12.32□□□□□ -0.44
IRF3-216ENST00000597180 DNAH2Q9P225 4427 aa12.32□□□□□ -0.44
IRF3-216ENST00000597180 A0A087WWC5 75 aa12.31□□□□□ -0.44
IRF3-216ENST00000597180 HIGD1CA8MV81 97 aa12.31□□□□□ -0.44
IRF3-216ENST00000597180 M0QY20 66 aa12.31□□□□□ -0.44
IRF3-216ENST00000597180 OR10J3Q5JRS4 329 aa12.31□□□□□ -0.44
IRF3-216ENST00000597180 IGHV3-38A0A0C4DH36 116 aa12.3□□□□□ -0.44
IRF3-216ENST00000597180 H7C1H1 209 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms