RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 SEC11AP67812 179 aa16.82■□□□□ 0.28
SRRM1-222ENST00000596378 KHDC1LQ5JSQ8 128 aa16.82■□□□□ 0.28
SRRM1-222ENST00000596378 C9orf85Q96MD7 179 aa16.82■□□□□ 0.28
SRRM1-222ENST00000596378 KNCNA6PVL3 124 aa16.81■□□□□ 0.28
SRRM1-222ENST00000596378 HIST2H2BCQ6DN03 193 aa16.81■□□□□ 0.28
SRRM1-222ENST00000596378 AMMECR1LQ6DCA0 310 aa16.8■□□□□ 0.28
SRRM1-222ENST00000596378 AMTNQ6UX39 209 aa16.8■□□□□ 0.28
SRRM1-222ENST00000596378 OR11H1Q8NG94 326 aa16.8■□□□□ 0.28
SRRM1-222ENST00000596378 IGHV1OR15-1A0A075B7D0 117 aa16.8■□□□□ 0.28
SRRM1-222ENST00000596378 TRAV8-6A0A0B4J262 113 aa16.8■□□□□ 0.28
SRRM1-222ENST00000596378 Q8N2B8 174 aa16.8■□□□□ 0.28
SRRM1-222ENST00000596378 FOXI2Q6ZQN5 318 aa16.79■□□□□ 0.28
SRRM1-222ENST00000596378 NEXN-AS1Q8NBZ9 246 aa16.79■□□□□ 0.28
SRRM1-222ENST00000596378 NF1P21359 2839 aa16.79■□□□□ 0.28
SRRM1-222ENST00000596378 BAALCQ8WXS3 180 aa16.79■□□□□ 0.28
SRRM1-222ENST00000596378 CHTOPQ9Y3Y2 248 aaKnown RBP16.79■□□□□ 0.28
SRRM1-222ENST00000596378 TRAV12-1A0A0B4J245 112 aa16.78■□□□□ 0.28
SRRM1-222ENST00000596378 F8VRH5 84 aa16.78■□□□□ 0.28
SRRM1-222ENST00000596378 H7C1H1 209 aa16.78■□□□□ 0.28
SRRM1-222ENST00000596378 K7EP13 123 aa16.78■□□□□ 0.28
SRRM1-222ENST00000596378 PPP1R17O96001 155 aa16.78■□□□□ 0.28
SRRM1-222ENST00000596378 RBMY1A1P0DJD3 496 aaKnown RBP16.78■□□□□ 0.28
SRRM1-222ENST00000596378 RBMY1CP0DJD4 496 aa16.78■□□□□ 0.28
SRRM1-222ENST00000596378 RBMY1FQ15415 496 aaKnown RBP16.78■□□□□ 0.28
SRRM1-222ENST00000596378 MAPKAPK5-AS1Q8N8E1 139 aa16.78■□□□□ 0.28
SRRM1-222ENST00000596378 CCDC168Q8NDH2 2452 aa16.78■□□□□ 0.28
SRRM1-222ENST00000596378 WFDC11Q8NEX6 87 aa16.78■□□□□ 0.28
SRRM1-222ENST00000596378 K7EMI3 77 aa16.78■□□□□ 0.28
SRRM1-222ENST00000596378 DUSP14O95147 198 aaKnown RBP16.78■□□□□ 0.28
SRRM1-222ENST00000596378 PLNP26678 52 aa16.78■□□□□ 0.28
SRRM1-222ENST00000596378 TRBV25-1A0A075B6N4 114 aa16.77■□□□□ 0.28
SRRM1-222ENST00000596378 DEFB131AP59861 70 aa16.77■□□□□ 0.28
SRRM1-222ENST00000596378 NAA38Q9BRA0 125 aaKnown RBP16.77■□□□□ 0.28
SRRM1-222ENST00000596378 FLNAP21333 2647 aaKnown RBP16.77■□□□□ 0.27
SRRM1-222ENST00000596378 LINC01619G3V211 115 aa16.76■□□□□ 0.27
SRRM1-222ENST00000596378 OR4C5Q8NGB2 326 aa16.76■□□□□ 0.27
SRRM1-222ENST00000596378 CHAC1Q9BUX1 264 aa16.76■□□□□ 0.27
SRRM1-222ENST00000596378 HTN1P15515 57 aa16.76■□□□□ 0.27
SRRM1-222ENST00000596378 POLR2KP53803 58 aaKnown RBP16.76■□□□□ 0.27
SRRM1-222ENST00000596378 CHD6Q8TD26 2715 aa16.76■□□□□ 0.27
SRRM1-222ENST00000596378 A6NDN8 102 aa16.75■□□□□ 0.27
SRRM1-222ENST00000596378 ZNF56Q15929 161 aa16.75■□□□□ 0.27
SRRM1-222ENST00000596378 HLA-DRB4P13762 266 aa16.75■□□□□ 0.27
SRRM1-222ENST00000596378 TMEM61Q8N0U2 210 aa16.75■□□□□ 0.27
SRRM1-222ENST00000596378 TP53TG1Q9Y2A0 90 aa16.75■□□□□ 0.27
SRRM1-222ENST00000596378 HLA-DRB4X5D2U9 266 aa16.75■□□□□ 0.27
SRRM1-222ENST00000596378 SDHAF1A6NFY7 115 aa16.74■□□□□ 0.27
SRRM1-222ENST00000596378 GCSHP23434 173 aa16.74■□□□□ 0.27
SRRM1-222ENST00000596378 RPL39P62891 51 aaKnown RBP16.74■□□□□ 0.27
SRRM1-222ENST00000596378 ZFP2Q6ZN57 461 aa16.74■□□□□ 0.27
SRRM1-222ENST00000596378 RAB37Q96AX2 223 aa16.74■□□□□ 0.27
SRRM1-222ENST00000596378 PRM2P04554 102 aa16.74■□□□□ 0.27
SRRM1-222ENST00000596378 CRYGDP07320 174 aa16.74■□□□□ 0.27
SRRM1-222ENST00000596378 MORN3Q6PF18 240 aaPredicted RBP16.74■□□□□ 0.27
SRRM1-222ENST00000596378 SYT8Q8NBV8 401 aa16.74■□□□□ 0.27
SRRM1-222ENST00000596378 DLX4Q92988 240 aaPredicted RBP16.74■□□□□ 0.27
SRRM1-222ENST00000596378 PRSS29PA6NIE9 313 aa16.73■□□□□ 0.27
SRRM1-222ENST00000596378 KLHL30-AS1Q8NEE0 82 aa16.73■□□□□ 0.27
SRRM1-222ENST00000596378 TSHBP01222 138 aa16.73■□□□□ 0.27
SRRM1-222ENST00000596378 FXYD2P54710 66 aa16.73■□□□□ 0.27
SRRM1-222ENST00000596378 C4orf3Q8WVX3 66 aa16.73■□□□□ 0.27
SRRM1-222ENST00000596378 HIGD1BQ9P298 99 aa16.73■□□□□ 0.27
SRRM1-222ENST00000596378 ZNF256Q9Y2P7 627 aaPredicted RBP16.73■□□□□ 0.27
SRRM1-222ENST00000596378 RBMY1BA6NDE4 496 aaKnown RBP16.72■□□□□ 0.27
SRRM1-222ENST00000596378 RBMY1EA6NEQ0 496 aaKnown RBP16.72■□□□□ 0.27
SRRM1-222ENST00000596378 RBMY1DP0C7P1 496 aaKnown RBP16.72■□□□□ 0.27
SRRM1-222ENST00000596378 ZNF876PQ49A33 203 aa16.72■□□□□ 0.27
SRRM1-222ENST00000596378 JMJD8Q96S16 334 aa16.72■□□□□ 0.27
SRRM1-222ENST00000596378 CYSLTR1Q9Y271 337 aa16.72■□□□□ 0.27
SRRM1-222ENST00000596378 H3BRM9 83 aa16.71■□□□□ 0.27
SRRM1-222ENST00000596378 M0QY20 66 aa16.71■□□□□ 0.27
SRRM1-222ENST00000596378 VCYO14598 125 aa16.71■□□□□ 0.27
SRRM1-222ENST00000596378 RPL32P62910 135 aaKnown RBP16.71■□□□□ 0.27
SRRM1-222ENST00000596378 C11orf44Q8N8P7 122 aa16.71■□□□□ 0.27
SRRM1-222ENST00000596378 H3BUT2 72 aa16.7■□□□□ 0.26
SRRM1-222ENST00000596378 Q6ZSV7 163 aa16.7■□□□□ 0.26
SRRM1-222ENST00000596378 KIR2DL4Q99706 377 aa16.7■□□□□ 0.26
SRRM1-222ENST00000596378 H3BMM0 161 aa16.69■□□□□ 0.26
SRRM1-222ENST00000596378 EMP1P54849 157 aa16.69■□□□□ 0.26
SRRM1-222ENST00000596378 PEMTQ9UBM1 199 aa16.69■□□□□ 0.26
SRRM1-222ENST00000596378 C9orf118A6NHY6 69 aa16.69■□□□□ 0.26
SRRM1-222ENST00000596378 IGIPA6NJ69 53 aa16.68■□□□□ 0.26
SRRM1-222ENST00000596378 TRBV27A0A0K0K1C4 114 aa16.68■□□□□ 0.26
SRRM1-222ENST00000596378 DNAJC9-AS1A6NH13 148 aa16.68■□□□□ 0.26
SRRM1-222ENST00000596378 TRGV11A0A075B6L2 103 aa16.67■□□□□ 0.26
SRRM1-222ENST00000596378 DYNLRB2Q8TF09 96 aa16.67■□□□□ 0.26
SRRM1-222ENST00000596378 WNK1Q9H4A3 2382 aa16.67■□□□□ 0.26
SRRM1-222ENST00000596378 IGHV3-73A0A0B4J1V6 119 aa16.67■□□□□ 0.26
SRRM1-222ENST00000596378 TRBV6-5A0A0K0K1A5 114 aa16.67■□□□□ 0.26
SRRM1-222ENST00000596378 K7ERJ3 54 aa16.67■□□□□ 0.26
SRRM1-222ENST00000596378 RNASE8Q8TDE3 154 aaKnown RBP16.66■□□□□ 0.26
SRRM1-222ENST00000596378 MAP6D1Q9H9H5 199 aa16.66■□□□□ 0.26
SRRM1-222ENST00000596378 A0A1W2PRX2 142 aa16.65■□□□□ 0.26
SRRM1-222ENST00000596378 OR11H12B2RN74 326 aa16.65■□□□□ 0.26
SRRM1-222ENST00000596378 OR11H2Q8NH07 326 aa16.65■□□□□ 0.26
SRRM1-222ENST00000596378 ESM1Q9NQ30 184 aa16.65■□□□□ 0.26
SRRM1-222ENST00000596378 PDZD2O15018 2839 aa16.65■□□□□ 0.26
SRRM1-222ENST00000596378 CD300EQ496F6 205 aaPredicted RBP16.64■□□□□ 0.25
SRRM1-222ENST00000596378 SETD2Q9BYW2 2564 aaPredicted RBP16.64■□□□□ 0.25
SRRM1-222ENST00000596378 IGLV4-69A0A075B6H9 119 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms