RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 LELP1Q5T871 98 aa9.36□□□□□ -0.91
APOC1-208ENST00000592535 C10orf126Q8N4M7 172 aa9.36□□□□□ -0.91
APOC1-208ENST00000592535 C14orf178Q8N769 122 aaPredicted RBP9.36□□□□□ -0.91
APOC1-208ENST00000592535 GTSF1LQ9H1H1 148 aa9.36□□□□□ -0.91
APOC1-208ENST00000592535 SCRT2Q9NQ03 307 aa9.36□□□□□ -0.91
APOC1-208ENST00000592535 Q9UF83 564 aa9.36□□□□□ -0.91
APOC1-208ENST00000592535 HSPG2P98160 4391 aa9.35□□□□□ -0.91
APOC1-208ENST00000592535 A0A087WTM6 91 aa9.35□□□□□ -0.91
APOC1-208ENST00000592535 EREGO14944 169 aa9.35□□□□□ -0.91
APOC1-208ENST00000592535 S100A9P06702 114 aaKnown RBP9.35□□□□□ -0.91
APOC1-208ENST00000592535 LINC00694P0DN24 101 aa9.35□□□□□ -0.91
APOC1-208ENST00000592535 RAB14P61106 215 aa9.35□□□□□ -0.91
APOC1-208ENST00000592535 KRTAP4-5Q9BYR2 181 aa9.35□□□□□ -0.91
APOC1-208ENST00000592535 MED9Q9NWA0 146 aa9.35□□□□□ -0.91
APOC1-208ENST00000592535 PHLDA3Q9Y5J5 127 aa9.35□□□□□ -0.91
APOC1-208ENST00000592535 A0A087WWL8 130 aa9.34□□□□□ -0.91
APOC1-208ENST00000592535 LINC00862A6NCI5 91 aa9.34□□□□□ -0.91
APOC1-208ENST00000592535 M0R381 172 aa9.34□□□□□ -0.91
APOC1-208ENST00000592535 RHODO00212 210 aa9.34□□□□□ -0.91
APOC1-208ENST00000592535 IGHV3-30P01768 117 aa9.34□□□□□ -0.91
APOC1-208ENST00000592535 IGHV3-33P01772 117 aa9.34□□□□□ -0.91
APOC1-208ENST00000592535 IGHV3-30-3P0DP02 117 aa9.34□□□□□ -0.91
APOC1-208ENST00000592535 IGHV3-30-5P0DP03 117 aa9.34□□□□□ -0.91
APOC1-208ENST00000592535 RPL19P84098 196 aaKnown RBP9.34□□□□□ -0.91
APOC1-208ENST00000592535 FAM74A4Q5TZK3 123 aa9.34□□□□□ -0.91
APOC1-208ENST00000592535 BAGE2Q86Y30 109 aa9.34□□□□□ -0.91
APOC1-208ENST00000592535 SFRP2Q96HF1 295 aa9.34□□□□□ -0.91
APOC1-208ENST00000592535 MLST8Q9BVC4 326 aa9.34□□□□□ -0.91
APOC1-208ENST00000592535 DNAH5Q8TE73 4624 aa9.33□□□□□ -0.92
APOC1-208ENST00000592535 ZFP82Q8N141 532 aa9.33□□□□□ -0.92
APOC1-208ENST00000592535 PGPEP1Q9NXJ5 209 aa9.33□□□□□ -0.92
APOC1-208ENST00000592535 GNG13Q9P2W3 67 aa9.33□□□□□ -0.92
APOC1-208ENST00000592535 PCLOQ9Y6V0 5065 aa9.33□□□□□ -0.92
APOC1-208ENST00000592535 APOBP04114 4563 aaKnown RBP9.32□□□□□ -0.92
APOC1-208ENST00000592535 IBA57-AS1B1ANH7 110 aa9.32□□□□□ -0.92
APOC1-208ENST00000592535 PRR27Q6MZM9 219 aa9.32□□□□□ -0.92
APOC1-208ENST00000592535 Q8N3U1 123 aa9.32□□□□□ -0.92
APOC1-208ENST00000592535 MAPKAPK5-AS1Q8N8E1 139 aa9.32□□□□□ -0.92
APOC1-208ENST00000592535 MANBALQ9NQG1 85 aa9.32□□□□□ -0.92
APOC1-208ENST00000592535 TEX46H3BTG2 121 aa9.31□□□□□ -0.92
APOC1-208ENST00000592535 RPL35P42766 123 aaKnown RBP9.31□□□□□ -0.92
APOC1-208ENST00000592535 C11orf52Q96A22 123 aa9.31□□□□□ -0.92
APOC1-208ENST00000592535 DERL1Q9BUN8 251 aa9.31□□□□□ -0.92
APOC1-208ENST00000592535 Q9HAA7 133 aa9.31□□□□□ -0.92
APOC1-208ENST00000592535 CXCL1P09341 107 aa9.3□□□□□ -0.92
APOC1-208ENST00000592535 CDPF1Q6NVV7 123 aa9.3□□□□□ -0.92
APOC1-208ENST00000592535 OR10AG1Q8NH19 301 aa9.3□□□□□ -0.92
APOC1-208ENST00000592535 RAB19A4D1S5 217 aa9.29□□□□□ -0.92
APOC1-208ENST00000592535 PSCAO43653 123 aa9.29□□□□□ -0.92
APOC1-208ENST00000592535 FAM210AQ96ND0 272 aa9.29□□□□□ -0.92
APOC1-208ENST00000592535 A0A087WWC5 75 aa9.28□□□□□ -0.92
APOC1-208ENST00000592535 MUC21A0A0G2JKD1 596 aa9.28□□□□□ -0.92
APOC1-208ENST00000592535 MUC21A0A140T8X8 626 aa9.28□□□□□ -0.92
APOC1-208ENST00000592535 LRCOL1A6NCL2 159 aa9.28□□□□□ -0.92
APOC1-208ENST00000592535 SNAI2O43623 268 aa9.28□□□□□ -0.92
APOC1-208ENST00000592535 CENPWQ5EE01 88 aa9.28□□□□□ -0.92
APOC1-208ENST00000592535 SSBP4Q9BWG4 385 aaPredicted RBP9.28□□□□□ -0.92
APOC1-208ENST00000592535 RBFOX3A6NFN3 312 aa9.27□□□□□ -0.93
APOC1-208ENST00000592535 NDUFS6O75380 124 aaKnown RBP9.27□□□□□ -0.93
APOC1-208ENST00000592535 IGLV2-8P01709 118 aa9.27□□□□□ -0.93
APOC1-208ENST00000592535 OR5AL1P0C617 328 aa9.27□□□□□ -0.93
APOC1-208ENST00000592535 KRTAP10-1P60331 282 aa9.27□□□□□ -0.93
APOC1-208ENST00000592535 LAGE3Q14657 143 aa9.27□□□□□ -0.93
APOC1-208ENST00000592535 DAZ4Q86SG3 579 aaKnown RBP9.27□□□□□ -0.93
APOC1-208ENST00000592535 Q8N1X5 172 aa9.27□□□□□ -0.93
APOC1-208ENST00000592535 DAZ3Q9NR90 486 aaKnown RBP9.27□□□□□ -0.93
APOC1-208ENST00000592535 TRBV10-1A0A0K0K1A3 114 aa9.26□□□□□ -0.93
APOC1-208ENST00000592535 TAGLN2P37802 199 aaKnown RBP9.26□□□□□ -0.93
APOC1-208ENST00000592535 SSTP61278 116 aa9.26□□□□□ -0.93
APOC1-208ENST00000592535 RPL36AP83881 106 aaKnown RBP9.26□□□□□ -0.93
APOC1-208ENST00000592535 SRSF3P84103 164 aaKnown RBP9.26□□□□□ -0.93
APOC1-208ENST00000592535 MEF2BQ02080 365 aaPredicted RBP9.26□□□□□ -0.93
APOC1-208ENST00000592535 ZNF56Q15929 161 aa9.26□□□□□ -0.93
APOC1-208ENST00000592535 NDUFA5Q16718 116 aa9.26□□□□□ -0.93
APOC1-208ENST00000592535 SPANXN1Q5VSR9 72 aa9.26□□□□□ -0.93
APOC1-208ENST00000592535 RPL36ALQ969Q0 106 aaKnown RBP9.26□□□□□ -0.93
APOC1-208ENST00000592535 SMDT1Q9H4I9 107 aa9.26□□□□□ -0.93
APOC1-208ENST00000592535 ABCA13Q86UQ4 5058 aa9.26□□□□□ -0.93
APOC1-208ENST00000592535 C9JQL5 133 aa9.25□□□□□ -0.93
APOC1-208ENST00000592535 IFNA1P01562 189 aa9.25□□□□□ -0.93
APOC1-208ENST00000592535 GZMBP10144 247 aa9.25□□□□□ -0.93
APOC1-208ENST00000592535 BCL2P10415 239 aa9.25□□□□□ -0.93
APOC1-208ENST00000592535 RAB4BP61018 213 aa9.25□□□□□ -0.93
APOC1-208ENST00000592535 UBE2D3P61077 147 aa9.25□□□□□ -0.93
APOC1-208ENST00000592535 UBE2D2P62837 147 aa9.25□□□□□ -0.93
APOC1-208ENST00000592535 SLC7A5P1Q8MH63 180 aa9.25□□□□□ -0.93
APOC1-208ENST00000592535 VAX2Q9UIW0 290 aa9.25□□□□□ -0.93
APOC1-208ENST00000592535 TRBV7-3A0A075B6L6 115 aa9.24□□□□□ -0.93
APOC1-208ENST00000592535 PDE6DO43924 150 aa9.24□□□□□ -0.93
APOC1-208ENST00000592535 COMMD7Q86VX2 200 aa9.24□□□□□ -0.93
APOC1-208ENST00000592535 NIT1Q86X76 327 aa9.24□□□□□ -0.93
APOC1-208ENST00000592535 NEXN-AS1Q8NBZ9 246 aa9.24□□□□□ -0.93
APOC1-208ENST00000592535 OR10G8Q8NGN5 311 aa9.24□□□□□ -0.93
APOC1-208ENST00000592535 TRBV20OR9-2A0A075B6H5 130 aa9.23□□□□□ -0.93
APOC1-208ENST00000592535 IGLV5-52A0A0A0MRZ9 124 aa9.23□□□□□ -0.93
APOC1-208ENST00000592535 TRAV8-3A0A0A6YYJ7 113 aa9.23□□□□□ -0.93
APOC1-208ENST00000592535 C19orf71A6NCJ1 209 aa9.23□□□□□ -0.93
APOC1-208ENST00000592535 GCSHP23434 173 aa9.23□□□□□ -0.93
APOC1-208ENST00000592535 GNG4P50150 75 aa9.23□□□□□ -0.93
APOC1-208ENST00000592535 XGP55808 180 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms