RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 COMMD7Q86VX2 200 aa14.46□□□□□ -0.09
DNMT1-227ENST00000592342 SLC25A29Q8N8R3 303 aa14.46□□□□□ -0.09
DNMT1-227ENST00000592342 AP1S3Q96PC3 154 aa14.46□□□□□ -0.09
DNMT1-227ENST00000592342 SMIM17P0DL12 118 aa14.45□□□□□ -0.1
DNMT1-227ENST00000592342 SRIP30626 198 aa14.45□□□□□ -0.1
DNMT1-227ENST00000592342 OR10G8Q8NGN5 311 aa14.45□□□□□ -0.1
DNMT1-227ENST00000592342 K7EQD1 137 aa14.44□□□□□ -0.1
DNMT1-227ENST00000592342 CRYGDP07320 174 aa14.44□□□□□ -0.1
DNMT1-227ENST00000592342 CTRLP40313 264 aa14.44□□□□□ -0.1
DNMT1-227ENST00000592342 NTF3P20783 257 aa14.43□□□□□ -0.1
DNMT1-227ENST00000592342 ZNF56Q15929 161 aa14.43□□□□□ -0.1
DNMT1-227ENST00000592342 RNF212Q495C1 297 aa14.43□□□□□ -0.1
DNMT1-227ENST00000592342 UFSP1Q6NVU6 142 aa14.43□□□□□ -0.1
DNMT1-227ENST00000592342 C14orf178Q8N769 122 aaPredicted RBP14.43□□□□□ -0.1
DNMT1-227ENST00000592342 TSKUQ8WUA8 353 aa14.43□□□□□ -0.1
DNMT1-227ENST00000592342 GTSF1Q8WW33 167 aa14.43□□□□□ -0.1
DNMT1-227ENST00000592342 BORCS7Q96B45 105 aa14.43□□□□□ -0.1
DNMT1-227ENST00000592342 LOC100131303A0A0U1RQF7 123 aa14.42□□□□□ -0.1
DNMT1-227ENST00000592342 TRGC1P0CF51 173 aa14.42□□□□□ -0.1
DNMT1-227ENST00000592342 TWIST1Q15672 202 aa14.42□□□□□ -0.1
DNMT1-227ENST00000592342 WDR73Q6P4I2 378 aa14.42□□□□□ -0.1
DNMT1-227ENST00000592342 NEGR1Q7Z3B1 354 aa14.42□□□□□ -0.1
DNMT1-227ENST00000592342 PGLYRP4Q96LB8 373 aa14.42□□□□□ -0.1
DNMT1-227ENST00000592342 GFRA4Q9GZZ7 299 aa14.42□□□□□ -0.1
DNMT1-227ENST00000592342 MSRB1Q9NZV6 116 aa14.42□□□□□ -0.1
DNMT1-227ENST00000592342 V9GYV3 84 aa14.42□□□□□ -0.1
DNMT1-227ENST00000592342 F5H697 171 aa14.41□□□□□ -0.1
DNMT1-227ENST00000592342 PNRC1Q12796 327 aaPredicted RBP14.41□□□□□ -0.1
DNMT1-227ENST00000592342 Q6ZSN1 163 aa14.41□□□□□ -0.1
DNMT1-227ENST00000592342 DYNC2H1Q8NCM8 4307 aaKnown RBP14.41□□□□□ -0.1
DNMT1-227ENST00000592342 PLECQ15149 4684 aaKnown RBP14.41□□□□□ -0.1
DNMT1-227ENST00000592342 NACAE9PAV3 2078 aa14.4□□□□□ -0.1
DNMT1-227ENST00000592342 LINC00862A6NCI5 91 aa14.4□□□□□ -0.1
DNMT1-227ENST00000592342 FAM231BA6NCW3 169 aa14.4□□□□□ -0.1
DNMT1-227ENST00000592342 TMEM218A2RU14 115 aa14.39□□□□□ -0.11
DNMT1-227ENST00000592342 HIGD1CA8MV81 97 aa14.39□□□□□ -0.11
DNMT1-227ENST00000592342 F8W036 122 aa14.39□□□□□ -0.11
DNMT1-227ENST00000592342 MGPP08493 103 aa14.39□□□□□ -0.11
DNMT1-227ENST00000592342 FAM3BP58499 235 aaPredicted RBP14.39□□□□□ -0.11
DNMT1-227ENST00000592342 ESRGQ1W209 222 aa14.39□□□□□ -0.11
DNMT1-227ENST00000592342 SH2D6Q7Z4S9 175 aa14.39□□□□□ -0.11
DNMT1-227ENST00000592342 CNFNQ9BYD5 112 aa14.39□□□□□ -0.11
DNMT1-227ENST00000592342 LINC00588Q9Y4M8 146 aa14.39□□□□□ -0.11
DNMT1-227ENST00000592342 FOXA3P55318 350 aaPredicted RBP14.38□□□□□ -0.11
DNMT1-227ENST00000592342 RAB4BP61018 213 aa14.38□□□□□ -0.11
DNMT1-227ENST00000592342 SMIM15Q7Z3B0 74 aa14.38□□□□□ -0.11
DNMT1-227ENST00000592342 GAGE12JA6NER3 117 aa14.37□□□□□ -0.11
DNMT1-227ENST00000592342 EVI2AP22794 236 aa14.37□□□□□ -0.11
DNMT1-227ENST00000592342 GAGE1Q13065 139 aa14.37□□□□□ -0.11
DNMT1-227ENST00000592342 GAGE4Q13068 117 aa14.37□□□□□ -0.11
DNMT1-227ENST00000592342 GAGE5Q13069 117 aa14.37□□□□□ -0.11
DNMT1-227ENST00000592342 GAGE13Q4V321 117 aa14.37□□□□□ -0.11
DNMT1-227ENST00000592342 DPH3P1Q9H4G8 78 aa14.37□□□□□ -0.11
DNMT1-227ENST00000592342 NAT8BQ9UHF3 227 aa14.37□□□□□ -0.11
DNMT1-227ENST00000592342 PPP1R2P9O14990 202 aa14.36□□□□□ -0.11
DNMT1-227ENST00000592342 LYPD5Q6UWN5 251 aa14.36□□□□□ -0.11
DNMT1-227ENST00000592342 A0A1B0GUT8 65 aa14.35□□□□□ -0.11
DNMT1-227ENST00000592342 MRPS16Q9Y3D3 137 aaKnown RBP14.35□□□□□ -0.11
DNMT1-227ENST00000592342 KIF25-AS1Q9Y6Z4 181 aa14.35□□□□□ -0.11
DNMT1-227ENST00000592342 KMT2CQ8NEZ4 4911 aaKnown RBP14.34□□□□□ -0.11
DNMT1-227ENST00000592342 TRBV10-1A0A0K0K1A3 114 aa14.34□□□□□ -0.11
DNMT1-227ENST00000592342 MT-ND4LP03901 98 aa14.34□□□□□ -0.11
DNMT1-227ENST00000592342 ADCYAP1P18509 176 aa14.34□□□□□ -0.11
DNMT1-227ENST00000592342 NUP35Q8NFH5 326 aa14.34□□□□□ -0.11
DNMT1-227ENST00000592342 ATP6V0E2Q8NHE4 81 aa14.34□□□□□ -0.11
DNMT1-227ENST00000592342 SEC11CQ9BY50 192 aa14.34□□□□□ -0.11
DNMT1-227ENST00000592342 RPL36AP83881 106 aaKnown RBP14.33□□□□□ -0.12
DNMT1-227ENST00000592342 ZNRF2Q8NHG8 242 aa14.33□□□□□ -0.12
DNMT1-227ENST00000592342 RPL36ALQ969Q0 106 aaKnown RBP14.33□□□□□ -0.12
DNMT1-227ENST00000592342 IGLV2-18A0A075B6J9 118 aa14.32□□□□□ -0.12
DNMT1-227ENST00000592342 SMIM27A0A1W2PRY6 76 aa14.32□□□□□ -0.12
DNMT1-227ENST00000592342 H7C1H1 209 aa14.32□□□□□ -0.12
DNMT1-227ENST00000592342 LINC00315P59091 139 aa14.32□□□□□ -0.12
DNMT1-227ENST00000592342 RIGQ13278 110 aa14.32□□□□□ -0.12
DNMT1-227ENST00000592342 ANAPC16Q96DE5 110 aa14.32□□□□□ -0.12
DNMT1-227ENST00000592342 ALMS1Q8TCU4 4167 aa14.31□□□□□ -0.12
DNMT1-227ENST00000592342 UPK3BQ9BT76 320 aa14.31□□□□□ -0.12
DNMT1-227ENST00000592342 Q9H8V8 135 aa14.31□□□□□ -0.12
DNMT1-227ENST00000592342 Q9UF83 564 aa14.31□□□□□ -0.12
DNMT1-227ENST00000592342 SUMO4Q6EEV6 95 aa14.3□□□□□ -0.12
DNMT1-227ENST00000592342 TRBV7-3A0A075B6L6 115 aa14.29□□□□□ -0.12
DNMT1-227ENST00000592342 M0R2N4 97 aa14.29□□□□□ -0.12
DNMT1-227ENST00000592342 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.29□□□□□ -0.12
DNMT1-227ENST00000592342 GTSF1LQ9H1H1 148 aa14.29□□□□□ -0.12
DNMT1-227ENST00000592342 LINC00694P0DN24 101 aa14.28□□□□□ -0.12
DNMT1-227ENST00000592342 NEXN-AS1Q8NBZ9 246 aa14.28□□□□□ -0.12
DNMT1-227ENST00000592342 TIRAPP58753 221 aa14.27□□□□□ -0.13
DNMT1-227ENST00000592342 TNFRSF18Q9Y5U5 241 aa14.27□□□□□ -0.13
DNMT1-227ENST00000592342 M0QY20 66 aa14.26□□□□□ -0.13
DNMT1-227ENST00000592342 SIVA1O15304 175 aa14.26□□□□□ -0.13
DNMT1-227ENST00000592342 OR10J3Q5JRS4 329 aa14.26□□□□□ -0.13
DNMT1-227ENST00000592342 RASL11AQ6T310 242 aa14.26□□□□□ -0.13
DNMT1-227ENST00000592342 TMEM191AQ9H0A3 160 aa14.26□□□□□ -0.13
DNMT1-227ENST00000592342 TRAV8-6A0A0B4J262 113 aa14.25□□□□□ -0.13
DNMT1-227ENST00000592342 CAMPP49913 170 aa14.25□□□□□ -0.13
DNMT1-227ENST00000592342 UBE2D3P61077 147 aa14.25□□□□□ -0.13
DNMT1-227ENST00000592342 UBE2D2P62837 147 aa14.25□□□□□ -0.13
DNMT1-227ENST00000592342 DNAJC30Q96LL9 226 aa14.25□□□□□ -0.13
DNMT1-227ENST00000592342 SACSQ9NZJ4 4579 aa14.25□□□□□ -0.13
DNMT1-227ENST00000592342 A0A1B0GW15 77 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms