RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 FOXA3P55318 350 aaPredicted RBP4.73□□□□□ -1.65
SMAD4-212ENST00000591126 C11orf68Q9H3H3 251 aaKnown RBP4.73□□□□□ -1.65
SMAD4-212ENST00000591126 ARHGAP21Q5T5U3 1957 aa4.73□□□□□ -1.65
SMAD4-212ENST00000591126 IGHV3-38A0A0C4DH36 116 aa4.73□□□□□ -1.65
SMAD4-212ENST00000591126 SZT2Q5T011 3432 aa4.73□□□□□ -1.65
SMAD4-212ENST00000591126 CRYBA4P53673 196 aa4.72□□□□□ -1.65
SMAD4-212ENST00000591126 LGALS9CQ6DKI2 356 aa4.72□□□□□ -1.65
SMAD4-212ENST00000591126 C2orf66Q6UXQ4 117 aa4.72□□□□□ -1.65
SMAD4-212ENST00000591126 STPG4Q8N801 248 aa4.72□□□□□ -1.65
SMAD4-212ENST00000591126 WFDC9Q8NEX5 89 aa4.72□□□□□ -1.65
SMAD4-212ENST00000591126 C5orf30Q96GV9 206 aa4.72□□□□□ -1.65
SMAD4-212ENST00000591126 RITA1Q96K30 269 aa4.72□□□□□ -1.65
SMAD4-212ENST00000591126 ROS1P08922 2347 aa4.72□□□□□ -1.65
SMAD4-212ENST00000591126 TRAV13-2A0A0B4J235 113 aa4.72□□□□□ -1.65
SMAD4-212ENST00000591126 NPSP0C0P6 89 aa4.72□□□□□ -1.65
SMAD4-212ENST00000591126 CTAG1AP78358 180 aa4.72□□□□□ -1.65
SMAD4-212ENST00000591126 UNQ9165/PRO28630Q6UXU0 137 aa4.72□□□□□ -1.65
SMAD4-212ENST00000591126 Q8N1Y9 231 aa4.72□□□□□ -1.65
SMAD4-212ENST00000591126 NUP35Q8NFH5 326 aa4.72□□□□□ -1.65
SMAD4-212ENST00000591126 TNRC6AQ8NDV7 1962 aaKnown RBP4.72□□□□□ -1.65
SMAD4-212ENST00000591126 TNRC6BQ9UPQ9 1833 aaKnown RBP4.72□□□□□ -1.65
SMAD4-212ENST00000591126 IFITM3Q01628 133 aa4.72□□□□□ -1.65
SMAD4-212ENST00000591126 KPRPQ5T749 579 aaPredicted RBP4.72□□□□□ -1.65
SMAD4-212ENST00000591126 MORN5Q5VZ52 161 aa4.72□□□□□ -1.65
SMAD4-212ENST00000591126 VSIG2Q96IQ7 327 aa4.72□□□□□ -1.65
SMAD4-212ENST00000591126 C18orf15Q96N68 181 aa4.72□□□□□ -1.65
SMAD4-212ENST00000591126 LINC00467Q9BRT7 94 aa4.72□□□□□ -1.65
SMAD4-212ENST00000591126 UQCR10Q9UDW1 63 aa4.72□□□□□ -1.65
SMAD4-212ENST00000591126 RPL18AQ02543 176 aaKnown RBP4.72□□□□□ -1.65
SMAD4-212ENST00000591126 CEMP1Q6PRD7 247 aaPredicted RBP4.72□□□□□ -1.65
SMAD4-212ENST00000591126 SNHG12Q9BXW3 62 aa4.72□□□□□ -1.65
SMAD4-212ENST00000591126 NAV3Q8IVL0 2385 aa4.71□□□□□ -1.65
SMAD4-212ENST00000591126 MUC21A0A0G2JKD1 596 aa4.71□□□□□ -1.65
SMAD4-212ENST00000591126 MUC21A0A140T8X8 626 aa4.71□□□□□ -1.65
SMAD4-212ENST00000591126 OR10D4PQ8NGN7 298 aa4.71□□□□□ -1.65
SMAD4-212ENST00000591126 ORAOV1Q8WV07 137 aa4.71□□□□□ -1.65
SMAD4-212ENST00000591126 TRBV24-1A0A075B6N3 115 aa4.71□□□□□ -1.66
SMAD4-212ENST00000591126 A0A0J9YWU9 116 aa4.71□□□□□ -1.66
SMAD4-212ENST00000591126 A0A1W2PPR1 153 aa4.71□□□□□ -1.66
SMAD4-212ENST00000591126 IGLC2P0DOY2 106 aa4.71□□□□□ -1.66
SMAD4-212ENST00000591126 MED12Q93074 2177 aa4.71□□□□□ -1.66
SMAD4-212ENST00000591126 WNK2Q9Y3S1 2297 aa4.71□□□□□ -1.66
SMAD4-212ENST00000591126 FABP2P12104 132 aa4.71□□□□□ -1.66
SMAD4-212ENST00000591126 KRTAP21-3Q3LHN1 58 aa4.71□□□□□ -1.66
SMAD4-212ENST00000591126 TMEM170AQ8WVE7 144 aa4.71□□□□□ -1.66
SMAD4-212ENST00000591126 SELENOKQ9Y6D0 94 aa4.71□□□□□ -1.66
SMAD4-212ENST00000591126 SNRNP200O75643 2136 aaKnown RBP4.71□□□□□ -1.66
SMAD4-212ENST00000591126 F6UB75 175 aa4.71□□□□□ -1.66
SMAD4-212ENST00000591126 H3BNG1 76 aa4.71□□□□□ -1.66
SMAD4-212ENST00000591126 TAL2Q16559 108 aa4.71□□□□□ -1.66
SMAD4-212ENST00000591126 Q6ZQT7 251 aa4.71□□□□□ -1.66
SMAD4-212ENST00000591126 IGKV3D-20A0A0C4DH25 116 aa4.7□□□□□ -1.66
SMAD4-212ENST00000591126 RS1O15537 224 aa4.7□□□□□ -1.66
SMAD4-212ENST00000591126 UBE2D1P51668 147 aa4.7□□□□□ -1.66
SMAD4-212ENST00000591126 Q6ZVH6 145 aa4.7□□□□□ -1.66
SMAD4-212ENST00000591126 ZFAND3Q9H8U3 227 aa4.7□□□□□ -1.66
SMAD4-212ENST00000591126 MSRB1Q9NZV6 116 aa4.7□□□□□ -1.66
SMAD4-212ENST00000591126 CHD9Q3L8U1 2897 aa4.7□□□□□ -1.66
SMAD4-212ENST00000591126 A0A096LPF7 62 aa4.7□□□□□ -1.66
SMAD4-212ENST00000591126 KLK12Q9UKR0 248 aa4.7□□□□□ -1.66
SMAD4-212ENST00000591126 CHD3Q12873 2000 aaKnown RBP4.7□□□□□ -1.66
SMAD4-212ENST00000591126 TRBV12-3P01733 135 aa4.7□□□□□ -1.66
SMAD4-212ENST00000591126 UFSP1Q6NVU6 142 aa4.7□□□□□ -1.66
SMAD4-212ENST00000591126 A0A1B0GWB2 263 aa4.7□□□□□ -1.66
SMAD4-212ENST00000591126 PTH2Q96A98 100 aa4.7□□□□□ -1.66
SMAD4-212ENST00000591126 TNRC18O15417 2968 aaPredicted RBP4.69□□□□□ -1.66
SMAD4-212ENST00000591126 ATXN8Q156A1 80 aa4.69□□□□□ -1.66
SMAD4-212ENST00000591126 CYTL1Q9NRR1 136 aa4.69□□□□□ -1.66
SMAD4-212ENST00000591126 DOPEY2Q9Y3R5 2298 aa4.69□□□□□ -1.66
SMAD4-212ENST00000591126 GNRH2O43555 120 aa4.69□□□□□ -1.66
SMAD4-212ENST00000591126 LINC00336Q6ZUF6 198 aa4.69□□□□□ -1.66
SMAD4-212ENST00000591126 NIT1Q86X76 327 aa4.69□□□□□ -1.66
SMAD4-212ENST00000591126 CDH23Q9H251 3354 aa4.69□□□□□ -1.66
SMAD4-212ENST00000591126 LOC105371267A0A1B0GV96 52 aa4.69□□□□□ -1.66
SMAD4-212ENST00000591126 P0C879 139 aa4.69□□□□□ -1.66
SMAD4-212ENST00000591126 INAFM2P0DMQ5 153 aa4.69□□□□□ -1.66
SMAD4-212ENST00000591126 IFITM1P13164 125 aa4.69□□□□□ -1.66
SMAD4-212ENST00000591126 XCL1P47992 114 aa4.69□□□□□ -1.66
SMAD4-212ENST00000591126 POM121L12Q8N7R1 296 aa4.69□□□□□ -1.66
SMAD4-212ENST00000591126 PTPRBP23467 1997 aa4.69□□□□□ -1.66
SMAD4-212ENST00000591126 LOC107984156A0A0G2JMH3 177 aa4.68□□□□□ -1.66
SMAD4-212ENST00000591126 SPAG11BQ08648 103 aa4.68□□□□□ -1.66
SMAD4-212ENST00000591126 ARL17AQ8IVW1 177 aa4.68□□□□□ -1.66
SMAD4-212ENST00000591126 CADP27708 2225 aa4.68□□□□□ -1.66
SMAD4-212ENST00000591126 IGHV3-64A0A075B6Q5 118 aa4.68□□□□□ -1.66
SMAD4-212ENST00000591126 ZNF664Q8N3J9 261 aa4.68□□□□□ -1.66
SMAD4-212ENST00000591126 RPL32P62910 135 aaKnown RBP4.68□□□□□ -1.66
SMAD4-212ENST00000591126 KIR3DS1Q14943 382 aa4.68□□□□□ -1.66
SMAD4-212ENST00000591126 PTPN13Q12923 2485 aa4.68□□□□□ -1.66
SMAD4-212ENST00000591126 LOC107984640A0A0U1RRK4 108 aa4.68□□□□□ -1.66
SMAD4-212ENST00000591126 FGF6P10767 208 aa4.68□□□□□ -1.66
SMAD4-212ENST00000591126 PAM16Q9Y3D7 125 aa4.68□□□□□ -1.66
SMAD4-212ENST00000591126 COL6A3P12111 3177 aa4.68□□□□□ -1.66
SMAD4-212ENST00000591126 MED12LQ86YW9 2145 aa4.68□□□□□ -1.66
SMAD4-212ENST00000591126 REG3AQ06141 175 aa4.67□□□□□ -1.66
SMAD4-212ENST00000591126 ERG28Q9UKR5 140 aa4.67□□□□□ -1.66
SMAD4-212ENST00000591126 SPG11Q96JI7 2443 aa4.67□□□□□ -1.66
SMAD4-212ENST00000591126 FREM1Q5H8C1 2179 aa4.67□□□□□ -1.66
SMAD4-212ENST00000591126 EML5Q05BV3 1969 aa4.67□□□□□ -1.66
SMAD4-212ENST00000591126 SMIM27A0A1W2PRY6 76 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms