RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 SSBP4Q9BWG4 385 aaPredicted RBP13.13□□□□□ -0.31
CIRBP-217ENST00000588230 SNAI2O43623 268 aa13.12□□□□□ -0.31
CIRBP-217ENST00000588230 OR5AL1P0C617 328 aa13.12□□□□□ -0.31
CIRBP-217ENST00000588230 TIRAPP58753 221 aa13.12□□□□□ -0.31
CIRBP-217ENST00000588230 RPS20P60866 119 aaKnown RBP13.12□□□□□ -0.31
CIRBP-217ENST00000588230 SPANXN1Q5VSR9 72 aa13.12□□□□□ -0.31
CIRBP-217ENST00000588230 MUC21A0A0G2JKD1 596 aa13.11□□□□□ -0.31
CIRBP-217ENST00000588230 MUC21A0A140T8X8 626 aa13.11□□□□□ -0.31
CIRBP-217ENST00000588230 C19orf71A6NCJ1 209 aa13.11□□□□□ -0.31
CIRBP-217ENST00000588230 GAGE12JA6NER3 117 aa13.11□□□□□ -0.31
CIRBP-217ENST00000588230 TMEM250H0YL14 139 aa13.11□□□□□ -0.31
CIRBP-217ENST00000588230 P01737 135 aa13.11□□□□□ -0.31
CIRBP-217ENST00000588230 CRYGDP07320 174 aa13.11□□□□□ -0.31
CIRBP-217ENST00000588230 GAGE1Q13065 139 aa13.11□□□□□ -0.31
CIRBP-217ENST00000588230 GAGE4Q13068 117 aa13.11□□□□□ -0.31
CIRBP-217ENST00000588230 GAGE5Q13069 117 aa13.11□□□□□ -0.31
CIRBP-217ENST00000588230 GAGE13Q4V321 117 aa13.11□□□□□ -0.31
CIRBP-217ENST00000588230 WFDC10BQ8IUB3 73 aa13.11□□□□□ -0.31
CIRBP-217ENST00000588230 ATP6V0E2Q8NHE4 81 aa13.11□□□□□ -0.31
CIRBP-217ENST00000588230 LY96Q9Y6Y9 160 aa13.11□□□□□ -0.31
CIRBP-217ENST00000588230 TRAV9-2A0A087WT02 112 aa13.1□□□□□ -0.31
CIRBP-217ENST00000588230 SSTP61278 116 aa13.1□□□□□ -0.31
CIRBP-217ENST00000588230 TOR2AQ5JU69 321 aa13.1□□□□□ -0.31
CIRBP-217ENST00000588230 C14orf178Q8N769 122 aaPredicted RBP13.1□□□□□ -0.31
CIRBP-217ENST00000588230 EIF5A2Q9GZV4 153 aaKnown RBP13.1□□□□□ -0.31
CIRBP-217ENST00000588230 XKRY2A2RUG3 117 aa13.09□□□□□ -0.31
CIRBP-217ENST00000588230 GZMBP10144 247 aa13.09□□□□□ -0.31
CIRBP-217ENST00000588230 BTF3P20290 206 aaKnown RBP13.09□□□□□ -0.31
CIRBP-217ENST00000588230 TPPP3Q9BW30 176 aa13.09□□□□□ -0.31
CIRBP-217ENST00000588230 GTSF1LQ9H1H1 148 aa13.09□□□□□ -0.31
CIRBP-217ENST00000588230 TRAV8-6A0A0B4J262 113 aa13.08□□□□□ -0.32
CIRBP-217ENST00000588230 EVI2AP22794 236 aa13.08□□□□□ -0.32
CIRBP-217ENST00000588230 CEBPGP53567 150 aa13.08□□□□□ -0.32
CIRBP-217ENST00000588230 FER1L6-AS1Q8NA97 138 aa13.08□□□□□ -0.32
CIRBP-217ENST00000588230 OCC1Q8TAD7 63 aa13.08□□□□□ -0.32
CIRBP-217ENST00000588230 DNAH10OSP0CZ25 163 aa13.07□□□□□ -0.32
CIRBP-217ENST00000588230 TNP2Q05952 138 aa13.07□□□□□ -0.32
CIRBP-217ENST00000588230 OR10J3Q5JRS4 329 aa13.07□□□□□ -0.32
CIRBP-217ENST00000588230 Q9UF83 564 aa13.07□□□□□ -0.32
CIRBP-217ENST00000588230 K7EP13 123 aa13.06□□□□□ -0.32
CIRBP-217ENST00000588230 IGLC6P0CF74 106 aa13.06□□□□□ -0.32
CIRBP-217ENST00000588230 LINC00315P59091 139 aa13.06□□□□□ -0.32
CIRBP-217ENST00000588230 LELP1Q5T871 98 aa13.06□□□□□ -0.32
CIRBP-217ENST00000588230 NUDT10Q8NFP7 164 aa13.06□□□□□ -0.32
CIRBP-217ENST00000588230 NUDT11Q96G61 164 aa13.06□□□□□ -0.32
CIRBP-217ENST00000588230 FAM210AQ96ND0 272 aa13.06□□□□□ -0.32
CIRBP-217ENST00000588230 IGHV3-38A0A0C4DH36 116 aa13.05□□□□□ -0.32
CIRBP-217ENST00000588230 SMIM17P0DL12 118 aa13.05□□□□□ -0.32
CIRBP-217ENST00000588230 LINC00694P0DN24 101 aa13.05□□□□□ -0.32
CIRBP-217ENST00000588230 RAB4BP61018 213 aa13.05□□□□□ -0.32
CIRBP-217ENST00000588230 ZNF56Q15929 161 aa13.05□□□□□ -0.32
CIRBP-217ENST00000588230 LRP1BQ9NZR2 4599 aa13.05□□□□□ -0.32
CIRBP-217ENST00000588230 TRBV10-1A0A0K0K1A3 114 aa13.04□□□□□ -0.32
CIRBP-217ENST00000588230 F2Z2F3 143 aa13.04□□□□□ -0.32
CIRBP-217ENST00000588230 F5H697 171 aa13.04□□□□□ -0.32
CIRBP-217ENST00000588230 K7EN84 100 aa13.04□□□□□ -0.32
CIRBP-217ENST00000588230 CACNG7P62955 275 aa13.04□□□□□ -0.32
CIRBP-217ENST00000588230 TEX261Q6UWH6 196 aa13.04□□□□□ -0.32
CIRBP-217ENST00000588230 AP1S3Q96PC3 154 aa13.04□□□□□ -0.32
CIRBP-217ENST00000588230 RNASE7Q9H1E1 156 aaKnown RBP13.04□□□□□ -0.32
CIRBP-217ENST00000588230 NDUFS6O75380 124 aaKnown RBP13.03□□□□□ -0.32
CIRBP-217ENST00000588230 RPL36AP83881 106 aaKnown RBP13.03□□□□□ -0.32
CIRBP-217ENST00000588230 C10orf126Q8N4M7 172 aa13.03□□□□□ -0.32
CIRBP-217ENST00000588230 RPL36ALQ969Q0 106 aaKnown RBP13.03□□□□□ -0.32
CIRBP-217ENST00000588230 RPP21Q9H633 154 aaKnown RBP13.03□□□□□ -0.32
CIRBP-217ENST00000588230 LYZL1Q6UWQ5 148 aa13.02□□□□□ -0.33
CIRBP-217ENST00000588230 NFE4Q86UQ8 179 aa13.02□□□□□ -0.33
CIRBP-217ENST00000588230 SMIM7Q9BQ49 75 aa13.02□□□□□ -0.33
CIRBP-217ENST00000588230 RYR1P21817 5038 aa13.02□□□□□ -0.33
CIRBP-217ENST00000588230 A0A087WWC5 75 aa13.01□□□□□ -0.33
CIRBP-217ENST00000588230 SRP19P09132 144 aaKnown RBP13.01□□□□□ -0.33
CIRBP-217ENST00000588230 LINC01556Q5JQF7 62 aa13.01□□□□□ -0.33
CIRBP-217ENST00000588230 MSRB1Q9NZV6 116 aa13.01□□□□□ -0.33
CIRBP-217ENST00000588230 TNFRSF18Q9Y5U5 241 aa13.01□□□□□ -0.33
CIRBP-217ENST00000588230 TRBV7-3A0A075B6L6 115 aa13□□□□□ -0.33
CIRBP-217ENST00000588230 ZNF727A8MUV8 499 aa13□□□□□ -0.33
CIRBP-217ENST00000588230 KIF25-AS1Q9Y6Z4 181 aa13□□□□□ -0.33
CIRBP-217ENST00000588230 HSPG2P98160 4391 aa12.99□□□□□ -0.33
CIRBP-217ENST00000588230 GATCO43716 136 aaKnown RBP12.99□□□□□ -0.33
CIRBP-217ENST00000588230 Q6ZRN7 208 aaPredicted RBP12.99□□□□□ -0.33
CIRBP-217ENST00000588230 OR10G8Q8NGN5 311 aa12.99□□□□□ -0.33
CIRBP-217ENST00000588230 IGHV3-30P01768 117 aa12.98□□□□□ -0.33
CIRBP-217ENST00000588230 IGHV3-33P01772 117 aa12.98□□□□□ -0.33
CIRBP-217ENST00000588230 MGPP08493 103 aa12.98□□□□□ -0.33
CIRBP-217ENST00000588230 TRGC1P0CF51 173 aa12.98□□□□□ -0.33
CIRBP-217ENST00000588230 IGHV3-30-3P0DP02 117 aa12.98□□□□□ -0.33
CIRBP-217ENST00000588230 IGHV3-30-5P0DP03 117 aa12.98□□□□□ -0.33
CIRBP-217ENST00000588230 CTRLP40313 264 aa12.98□□□□□ -0.33
CIRBP-217ENST00000588230 ERVFC1-1P60608 527 aa12.98□□□□□ -0.33
CIRBP-217ENST00000588230 UBE2D3P61077 147 aa12.98□□□□□ -0.33
CIRBP-217ENST00000588230 UBE2D2P62837 147 aa12.98□□□□□ -0.33
CIRBP-217ENST00000588230 WDR73Q6P4I2 378 aa12.98□□□□□ -0.33
CIRBP-217ENST00000588230 FAM231DQ6ZW35 169 aa12.98□□□□□ -0.33
CIRBP-217ENST00000588230 DNAH5Q8TE73 4624 aa12.98□□□□□ -0.33
CIRBP-217ENST00000588230 NTF3P20783 257 aa12.97□□□□□ -0.33
CIRBP-217ENST00000588230 NEXN-AS1Q8NBZ9 246 aa12.97□□□□□ -0.33
CIRBP-217ENST00000588230 KRTAP17-1Q9BYP8 105 aa12.97□□□□□ -0.33
CIRBP-217ENST00000588230 TWIST1Q15672 202 aa12.96□□□□□ -0.33
CIRBP-217ENST00000588230 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.96□□□□□ -0.33
CIRBP-217ENST00000588230 PCLOQ9Y6V0 5065 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms