RNA–Protein interactions for RNA: ENST00000586318.1

TCF3-208, Transcript of transcription factor 3, human

TSL 3

Gene TCF3, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF3-208	ENST00000586318	SAMD10	Q9BYL1	202 aa		11.76	□□□□□ -0.53
TCF3-208	ENST00000586318	TRAV9-1	A0A075B6T8	112 aa		11.75	□□□□□ -0.53
TCF3-208	ENST00000586318	DEFB131B	A0A096LNP1	70 aa		11.75	□□□□□ -0.53
TCF3-208	ENST00000586318		A0A1B0GW15	77 aa		11.75	□□□□□ -0.53
TCF3-208	ENST00000586318	ATP6V1G1	O75348	118 aa		11.75	□□□□□ -0.53
TCF3-208	ENST00000586318	ATP5L2	Q7Z4Y8	100 aa		11.75	□□□□□ -0.53
TCF3-208	ENST00000586318	BTF3L4	Q96K17	158 aa		11.75	□□□□□ -0.53
TCF3-208	ENST00000586318		A0A087WWL8	130 aa		11.74	□□□□□ -0.53
TCF3-208	ENST00000586318	SMIM17	P0DL12	118 aa		11.74	□□□□□ -0.53
TCF3-208	ENST00000586318	HTN3	P15516	51 aa		11.74	□□□□□ -0.53
TCF3-208	ENST00000586318	HOXA5	P20719	270 aa		11.74	□□□□□ -0.53
TCF3-208	ENST00000586318	EVI2A	P22794	236 aa		11.74	□□□□□ -0.53
TCF3-208	ENST00000586318	S100A1	P23297	94 aa		11.74	□□□□□ -0.53
TCF3-208	ENST00000586318	FHL2	Q14192	279 aa		11.74	□□□□□ -0.53
TCF3-208	ENST00000586318	SMIM15	Q7Z3B0	74 aa		11.74	□□□□□ -0.53
TCF3-208	ENST00000586318	C14orf178	Q8N769	122 aa	Predicted RBP	11.74	□□□□□ -0.53
TCF3-208	ENST00000586318	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.74	□□□□□ -0.53
TCF3-208	ENST00000586318	KIF25-AS1	Q9Y6Z4	181 aa		11.74	□□□□□ -0.53
TCF3-208	ENST00000586318	TRGV4	A0A0C4DH28	118 aa		11.73	□□□□□ -0.53
TCF3-208	ENST00000586318		A0A1B0GXF2	115 aa		11.73	□□□□□ -0.53
TCF3-208	ENST00000586318		F5H768	121 aa		11.73	□□□□□ -0.53
TCF3-208	ENST00000586318	S100A8	P05109	93 aa		11.73	□□□□□ -0.53
TCF3-208	ENST00000586318	HBB	P68871	147 aa		11.73	□□□□□ -0.53
TCF3-208	ENST00000586318	FAM74A4	Q5TZK3	123 aa		11.73	□□□□□ -0.53
TCF3-208	ENST00000586318	MRPL54	Q6P161	138 aa	Known RBP	11.73	□□□□□ -0.53
TCF3-208	ENST00000586318	DPH3P1	Q9H4G8	78 aa		11.73	□□□□□ -0.53
TCF3-208	ENST00000586318	URGCP-MRPS24	S4R325	110 aa		11.73	□□□□□ -0.53
TCF3-208	ENST00000586318	IGHV3-73	A0A0B4J1V6	119 aa		11.72	□□□□□ -0.53
TCF3-208	ENST00000586318	GATA1	P15976	413 aa	Predicted RBP	11.72	□□□□□ -0.53
TCF3-208	ENST00000586318	LINC00315	P59091	139 aa		11.72	□□□□□ -0.53
TCF3-208	ENST00000586318	SLA	Q13239	276 aa		11.72	□□□□□ -0.53
TCF3-208	ENST00000586318	TMEM191A	Q9H0A3	160 aa		11.72	□□□□□ -0.53
TCF3-208	ENST00000586318	CAMP	P49913	170 aa		11.71	□□□□□ -0.53
TCF3-208	ENST00000586318	GATD1	Q8NB37	220 aa		11.71	□□□□□ -0.53
TCF3-208	ENST00000586318	MUC7	Q8TAX7	377 aa		11.71	□□□□□ -0.53
TCF3-208	ENST00000586318	PRO0255	Q9UI72	69 aa		11.71	□□□□□ -0.53
TCF3-208	ENST00000586318	MGP	P08493	103 aa		11.7	□□□□□ -0.54
TCF3-208	ENST00000586318	RAB4B	P61018	213 aa		11.7	□□□□□ -0.54
TCF3-208	ENST00000586318	CEMP1	Q6PRD7	247 aa	Predicted RBP	11.7	□□□□□ -0.54
TCF3-208	ENST00000586318	RASL11A	Q6T310	242 aa		11.7	□□□□□ -0.54
TCF3-208	ENST00000586318	SMCO4	Q9NRQ5	59 aa		11.7	□□□□□ -0.54
TCF3-208	ENST00000586318	HHLA3	Q9XRX5	114 aa		11.7	□□□□□ -0.54
TCF3-208	ENST00000586318	TRBV6-4	A0A1B0GX49	114 aa		11.69	□□□□□ -0.54
TCF3-208	ENST00000586318	NUPR2	A6NF83	97 aa		11.69	□□□□□ -0.54
TCF3-208	ENST00000586318	CRYBA4	P53673	196 aa		11.69	□□□□□ -0.54
TCF3-208	ENST00000586318	ELOB	Q15370	118 aa		11.69	□□□□□ -0.54
TCF3-208	ENST00000586318	ZNF56	Q15929	161 aa		11.69	□□□□□ -0.54
TCF3-208	ENST00000586318		Q6ZSN1	163 aa		11.69	□□□□□ -0.54
TCF3-208	ENST00000586318	FAM210B	Q96KR6	192 aa		11.69	□□□□□ -0.54
TCF3-208	ENST00000586318	TMEM88	Q6PEY1	159 aa		11.68	□□□□□ -0.54
TCF3-208	ENST00000586318	CBLN2	Q8IUK8	224 aa		11.68	□□□□□ -0.54
TCF3-208	ENST00000586318	TG	P01266	2768 aa		11.67	□□□□□ -0.54
TCF3-208	ENST00000586318	TRBV24-1	A0A075B6N3	115 aa		11.67	□□□□□ -0.54
TCF3-208	ENST00000586318	TRAV26-1	A0A087WT03	109 aa		11.67	□□□□□ -0.54
TCF3-208	ENST00000586318		F5H697	171 aa		11.67	□□□□□ -0.54
TCF3-208	ENST00000586318		H3BNG1	76 aa		11.67	□□□□□ -0.54
TCF3-208	ENST00000586318		K7EQD1	137 aa		11.67	□□□□□ -0.54
TCF3-208	ENST00000586318	PAX4	O43316	350 aa		11.67	□□□□□ -0.54
TCF3-208	ENST00000586318	RHOH	Q15669	191 aa		11.67	□□□□□ -0.54
TCF3-208	ENST00000586318	SLC25A29	Q8N8R3	303 aa		11.67	□□□□□ -0.54
TCF3-208	ENST00000586318	VSIG2	Q96IQ7	327 aa		11.67	□□□□□ -0.54
TCF3-208	ENST00000586318	YPEL4	Q96NS1	127 aa		11.67	□□□□□ -0.54
TCF3-208	ENST00000586318	TGIF2-C20orf24	A0A0A6YYL0	155 aa		11.66	□□□□□ -0.54
TCF3-208	ENST00000586318		A0A0J9YY99	117 aa		11.66	□□□□□ -0.54
TCF3-208	ENST00000586318	RAB4A	P20338	218 aa		11.66	□□□□□ -0.54
TCF3-208	ENST00000586318	COX19	Q49B96	90 aa		11.66	□□□□□ -0.54
TCF3-208	ENST00000586318	FAM104B	Q5XKR9	115 aa		11.66	□□□□□ -0.54
TCF3-208	ENST00000586318	SUMO4	Q6EEV6	95 aa		11.66	□□□□□ -0.54
TCF3-208	ENST00000586318	AMN1	Q8IY45	258 aa		11.66	□□□□□ -0.54
TCF3-208	ENST00000586318	FRZB	Q92765	325 aa		11.66	□□□□□ -0.54
TCF3-208	ENST00000586318	RNF185	Q96GF1	192 aa		11.66	□□□□□ -0.54
TCF3-208	ENST00000586318	PRADC1	Q9BSG0	188 aa		11.66	□□□□□ -0.54
TCF3-208	ENST00000586318	KLK5	Q9Y337	293 aa	Predicted RBP	11.66	□□□□□ -0.54
TCF3-208	ENST00000586318	ZFAND6	Q6FIF0	208 aa		11.65	□□□□□ -0.54
TCF3-208	ENST00000586318	TRBV10-1	A0A0K0K1A3	114 aa		11.64	□□□□□ -0.55
TCF3-208	ENST00000586318	IGLL5	B9A064	214 aa		11.64	□□□□□ -0.55
TCF3-208	ENST00000586318	C3orf84	H3BNL1	204 aa		11.64	□□□□□ -0.55
TCF3-208	ENST00000586318		H7C1H1	209 aa		11.64	□□□□□ -0.55
TCF3-208	ENST00000586318	TMEM136	Q6ZRR5	245 aa		11.64	□□□□□ -0.55
TCF3-208	ENST00000586318		M0QY20	66 aa		11.63	□□□□□ -0.55
TCF3-208	ENST00000586318	SCO1	O75880	301 aa		11.63	□□□□□ -0.55
TCF3-208	ENST00000586318	GYPE	P15421	78 aa		11.63	□□□□□ -0.55
TCF3-208	ENST00000586318	C15orf53	Q8NAA6	179 aa		11.63	□□□□□ -0.55
TCF3-208	ENST00000586318	MRAP2	Q96G30	205 aa		11.63	□□□□□ -0.55
TCF3-208	ENST00000586318	GNB1L	Q9BYB4	327 aa		11.63	□□□□□ -0.55
TCF3-208	ENST00000586318	TRAV26-2	A0A0B4J265	109 aa		11.62	□□□□□ -0.55
TCF3-208	ENST00000586318	LOC100131303	A0A0U1RQF7	123 aa		11.62	□□□□□ -0.55
TCF3-208	ENST00000586318	HLA-DQA1	P01909	254 aa		11.62	□□□□□ -0.55
TCF3-208	ENST00000586318	TCTA	P57738	103 aa		11.62	□□□□□ -0.55
TCF3-208	ENST00000586318	MRPL51	Q4U2R6	128 aa	Known RBP	11.62	□□□□□ -0.55
TCF3-208	ENST00000586318	ICOS	Q9Y6W8	199 aa		11.62	□□□□□ -0.55
TCF3-208	ENST00000586318	MT-ND6	P03923	174 aa		11.61	□□□□□ -0.55
TCF3-208	ENST00000586318		P0DMU3	169 aa		11.61	□□□□□ -0.55
TCF3-208	ENST00000586318	FAM231A	P0DMU4	169 aa		11.61	□□□□□ -0.55
TCF3-208	ENST00000586318	FAM231C	P0DMU5	169 aa		11.61	□□□□□ -0.55
TCF3-208	ENST00000586318	DNAH7	Q8WXX0	4024 aa		11.61	□□□□□ -0.55
TCF3-208	ENST00000586318	RPL36A	P83881	106 aa	Known RBP	11.6	□□□□□ -0.55
TCF3-208	ENST00000586318	MRPL23	Q16540	153 aa	Known RBP	11.6	□□□□□ -0.55
TCF3-208	ENST00000586318	NEXN-AS1	Q8NBZ9	246 aa		11.6	□□□□□ -0.55
TCF3-208	ENST00000586318	RPL36AL	Q969Q0	106 aa	Known RBP	11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms