RNA–Protein interactions for RNA: ENST00000585685.5

APOC4-APOC2-201, Transcript of APOC4-APOC2 readthrough (NMD candidate), humanhuman

TSL 5

Gene APOC4-APOC2, Length 1,829 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-APOC2-201ENST00000585685 H7C1H1 209 aa12.22□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 CCL25O15444 150 aa12.22□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 PTTG1IPP53801 180 aa12.22□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 POLR2KP53803 58 aaKnown RBP12.22□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 DEFB136Q30KP8 78 aa12.22□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 GTSCR1Q86UQ5 136 aa12.22□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 TEX29Q8N6K0 151 aa12.22□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 SYT8Q8NBV8 401 aa12.22□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 NEXN-AS1Q8NBZ9 246 aa12.22□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 MDFICQ9P1T7 246 aa12.22□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 HIGD1BQ9P298 99 aa12.22□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 PEMTQ9UBM1 199 aa12.22□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 SORL1Q92673 2214 aa12.22□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 OR11H1Q8NG94 326 aa12.21□□□□□ -0.45
APOC4-APOC2-201ENST00000585685 A0A087WWL8 130 aa12.21□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 LINC01549A6NIU2 74 aa12.21□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 A8MTW9 85 aa12.21□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 NBPF19A0A087WUL8 3843 aa12.2□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 TRBV6-5A0A0K0K1A5 114 aa12.2□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 ERASQ7Z444 233 aa12.2□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 A6NDN8 102 aa12.19□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 CHTOPQ9Y3Y2 248 aaKnown RBP12.19□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 TRGV11A0A075B6L2 103 aa12.18□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 VCYO14598 125 aa12.18□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 VAMP3Q15836 100 aa12.18□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 BAALCQ8WXS3 180 aa12.18□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 APCP25054 2843 aa12.18□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 AKAP9Q99996 3911 aa12.18□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 F5H697 171 aa12.18□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 CRYGDP07320 174 aa12.18□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 TTTY13Q9BZ97 58 aa12.18□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 CYSLTR1Q9Y271 337 aa12.18□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 TRBV27A0A0K0K1C4 114 aa12.17□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 DEFB131AP59861 70 aa12.17□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 ZFP2Q6ZN57 461 aa12.17□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 NEGR1Q7Z3B1 354 aa12.17□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 WFDC11Q8NEX6 87 aa12.17□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 TRBV25-1A0A075B6N4 114 aa12.16□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 H3BRM9 83 aa12.16□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 FAM74A4Q5TZK3 123 aa12.16□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 Q6ZSV7 163 aa12.16□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 KIR2DL4Q99706 377 aa12.16□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 ZNF256Q9Y2P7 627 aaPredicted RBP12.16□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 GCN1Q92616 2671 aaKnown RBP12.16□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 TENM4Q6N022 2769 aa12.16□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 SDHAF1A6NFY7 115 aa12.16□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 KNCNA6PVL3 124 aa12.16□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 H3BMM0 161 aa12.16□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 M0QY20 66 aa12.16□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 RBMY1A1P0DJD3 496 aaKnown RBP12.16□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 RBMY1CP0DJD4 496 aa12.16□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 RBMY1FQ15415 496 aaKnown RBP12.16□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 TMEM61Q8N0U2 210 aa12.16□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 DLX4Q92988 240 aaPredicted RBP12.16□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 RIPPLY3P57055 190 aa12.15□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 KHDC1LQ5JSQ8 128 aa12.15□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 KLHL30-AS1Q8NEE0 82 aa12.15□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 DUX3Q96PT4 197 aa12.15□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 CHAC1Q9BUX1 264 aa12.15□□□□□ -0.46
APOC4-APOC2-201ENST00000585685 PRSS29PA6NIE9 313 aa12.14□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 IGIPA6NJ69 53 aa12.14□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 ZNF56Q15929 161 aa12.14□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 ZNF876PQ49A33 203 aa12.14□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 MORN3Q6PF18 240 aaPredicted RBP12.14□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 TP53TG1Q9Y2A0 90 aa12.14□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 ITPR3Q14573 2671 aa12.14□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 DNAJC9-AS1A6NH13 148 aa12.14□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 TRPT1Q86TN4 253 aaKnown RBP12.14□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 JMJD8Q96S16 334 aa12.14□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 TRAV8-6A0A0B4J262 113 aa12.13□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 RBMY1BA6NDE4 496 aaKnown RBP12.13□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 RBMY1EA6NEQ0 496 aaKnown RBP12.13□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 C9orf118A6NHY6 69 aa12.13□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 TSHBP01222 138 aa12.13□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 RBMY1DP0C7P1 496 aaKnown RBP12.13□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 DEFB114Q30KQ6 69 aa12.13□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 AMMECR1LQ6DCA0 310 aa12.13□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 MAPKAPK5-AS1Q8N8E1 139 aa12.13□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 DYNLRB2Q8TF09 96 aa12.13□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 TMEM141Q96I45 108 aa12.13□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 TIMM17AQ99595 171 aa12.13□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 OR4C5Q8NGB2 326 aa12.12□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 SPAG8Q99932 426 aaPredicted RBP12.12□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 MAP6D1Q9H9H5 199 aa12.12□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 EDA2RQ9HAV5 297 aa12.12□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 MYO9AB2RTY4 2548 aa12.11□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 RHOHQ15669 191 aa12.11□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 TAL2Q16559 108 aa12.11□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 NSUN5P1Q3KNT7 163 aa12.11□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 OR11H12B2RN74 326 aa12.1□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 E9PLD3 99 aa12.1□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 PAPPA-AS1Q5QFB9 102 aa12.1□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 PIK3CD-AS1Q5SR53 167 aa12.1□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 OR11H2Q8NH07 326 aa12.1□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 TM2D2Q9BX73 214 aa12.1□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 GCSHP23434 173 aa12.09□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 FXYD2P54710 66 aa12.09□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 RPL39P62891 51 aaKnown RBP12.09□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 PMVKQ15126 192 aa12.09□□□□□ -0.47
APOC4-APOC2-201ENST00000585685 TLN2Q9Y4G6 2542 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms