RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 RPS20P60866 119 aaKnown RBP11.11□□□□□ -0.63
ERBB2-222ENST00000584908 TEX261Q6UWH6 196 aa11.11□□□□□ -0.63
ERBB2-222ENST00000584908 OR10AG1Q8NH19 301 aa11.11□□□□□ -0.63
ERBB2-222ENST00000584908 PKD1P98161 4303 aa11.11□□□□□ -0.63
ERBB2-222ENST00000584908 TOR2AQ5JU69 321 aa11.1□□□□□ -0.63
ERBB2-222ENST00000584908 C6orf223Q8N319 242 aa11.1□□□□□ -0.63
ERBB2-222ENST00000584908 OR2D3Q8NGH3 330 aa11.1□□□□□ -0.63
ERBB2-222ENST00000584908 A0A1B0GVY2 172 aa11.09□□□□□ -0.63
ERBB2-222ENST00000584908 PRSS29PA6NIE9 313 aa11.09□□□□□ -0.63
ERBB2-222ENST00000584908 K7EN84 100 aa11.09□□□□□ -0.63
ERBB2-222ENST00000584908 P01737 135 aa11.09□□□□□ -0.63
ERBB2-222ENST00000584908 OCC1Q8TAD7 63 aa11.09□□□□□ -0.63
ERBB2-222ENST00000584908 A0A087WWL8 130 aa11.09□□□□□ -0.63
ERBB2-222ENST00000584908 XKRY2A2RUG3 117 aa11.09□□□□□ -0.63
ERBB2-222ENST00000584908 K7EP13 123 aa11.09□□□□□ -0.63
ERBB2-222ENST00000584908 FAM74A4Q5TZK3 123 aa11.09□□□□□ -0.63
ERBB2-222ENST00000584908 C14orf178Q8N769 122 aaPredicted RBP11.09□□□□□ -0.63
ERBB2-222ENST00000584908 NUDT10Q8NFP7 164 aa11.09□□□□□ -0.63
ERBB2-222ENST00000584908 NUDT11Q96G61 164 aa11.09□□□□□ -0.63
ERBB2-222ENST00000584908 EIF5A2Q9GZV4 153 aaKnown RBP11.09□□□□□ -0.63
ERBB2-222ENST00000584908 LY96Q9Y6Y9 160 aa11.09□□□□□ -0.63
ERBB2-222ENST00000584908 DNAH10OSP0CZ25 163 aa11.08□□□□□ -0.64
ERBB2-222ENST00000584908 SPANXN1Q5VSR9 72 aa11.08□□□□□ -0.64
ERBB2-222ENST00000584908 FER1L6-AS1Q8NA97 138 aa11.08□□□□□ -0.64
ERBB2-222ENST00000584908 ATP6V0E2Q8NHE4 81 aa11.08□□□□□ -0.64
ERBB2-222ENST00000584908 GTSF1LQ9H1H1 148 aa11.08□□□□□ -0.64
ERBB2-222ENST00000584908 Q9UF83 564 aa11.08□□□□□ -0.64
ERBB2-222ENST00000584908 TRBV10-1A0A0K0K1A3 114 aa11.07□□□□□ -0.64
ERBB2-222ENST00000584908 GZMBP10144 247 aa11.07□□□□□ -0.64
ERBB2-222ENST00000584908 WFDC10BQ8IUB3 73 aa11.07□□□□□ -0.64
ERBB2-222ENST00000584908 F2Z2F3 143 aa11.06□□□□□ -0.64
ERBB2-222ENST00000584908 SRP19P09132 144 aaKnown RBP11.06□□□□□ -0.64
ERBB2-222ENST00000584908 RAB4BP61018 213 aa11.06□□□□□ -0.64
ERBB2-222ENST00000584908 FAM231DQ6ZW35 169 aa11.06□□□□□ -0.64
ERBB2-222ENST00000584908 KIF25-AS1Q9Y6Z4 181 aa11.06□□□□□ -0.64
ERBB2-222ENST00000584908 MUC21A0A0G2JKD1 596 aa11.05□□□□□ -0.64
ERBB2-222ENST00000584908 MUC21A0A140T8X8 626 aa11.05□□□□□ -0.64
ERBB2-222ENST00000584908 GAGE12JA6NER3 117 aa11.05□□□□□ -0.64
ERBB2-222ENST00000584908 CACNG7P62955 275 aa11.05□□□□□ -0.64
ERBB2-222ENST00000584908 GAGE1Q13065 139 aa11.05□□□□□ -0.64
ERBB2-222ENST00000584908 GAGE4Q13068 117 aa11.05□□□□□ -0.64
ERBB2-222ENST00000584908 GAGE5Q13069 117 aa11.05□□□□□ -0.64
ERBB2-222ENST00000584908 GAGE13Q4V321 117 aa11.05□□□□□ -0.64
ERBB2-222ENST00000584908 LELP1Q5T871 98 aa11.05□□□□□ -0.64
ERBB2-222ENST00000584908 OR10G8Q8NGN5 311 aa11.05□□□□□ -0.64
ERBB2-222ENST00000584908 RNASE7Q9H1E1 156 aaKnown RBP11.05□□□□□ -0.64
ERBB2-222ENST00000584908 RPP21Q9H633 154 aaKnown RBP11.05□□□□□ -0.64
ERBB2-222ENST00000584908 PKHD1P08F94 4074 aa11.04□□□□□ -0.64
ERBB2-222ENST00000584908 CTRLP40313 264 aa11.04□□□□□ -0.64
ERBB2-222ENST00000584908 LINC00315P59091 139 aa11.04□□□□□ -0.64
ERBB2-222ENST00000584908 WDR73Q6P4I2 378 aa11.04□□□□□ -0.64
ERBB2-222ENST00000584908 AP1S3Q96PC3 154 aa11.04□□□□□ -0.64
ERBB2-222ENST00000584908 SMIM7Q9BQ49 75 aa11.04□□□□□ -0.64
ERBB2-222ENST00000584908 CNFNQ9BYD5 112 aa11.04□□□□□ -0.64
ERBB2-222ENST00000584908 TRAV9-2A0A087WT02 112 aa11.03□□□□□ -0.64
ERBB2-222ENST00000584908 LINC01556Q5JQF7 62 aa11.03□□□□□ -0.64
ERBB2-222ENST00000584908 LYZL1Q6UWQ5 148 aa11.03□□□□□ -0.64
ERBB2-222ENST00000584908 SMDT1Q9H4I9 107 aa11.03□□□□□ -0.64
ERBB2-222ENST00000584908 TRAV8-6A0A0B4J262 113 aa11.02□□□□□ -0.65
ERBB2-222ENST00000584908 IGHV3-38A0A0C4DH36 116 aa11.02□□□□□ -0.65
ERBB2-222ENST00000584908 EVI2AP22794 236 aa11.02□□□□□ -0.65
ERBB2-222ENST00000584908 CEBPGP53567 150 aa11.02□□□□□ -0.65
ERBB2-222ENST00000584908 TNP2Q05952 138 aa11.02□□□□□ -0.65
ERBB2-222ENST00000584908 Q6ZRN7 208 aaPredicted RBP11.02□□□□□ -0.65
ERBB2-222ENST00000584908 LINC01551Q86U37 167 aa11.02□□□□□ -0.65
ERBB2-222ENST00000584908 TPPP3Q9BW30 176 aa11.02□□□□□ -0.65
ERBB2-222ENST00000584908 MSRB1Q9NZV6 116 aa11.02□□□□□ -0.65
ERBB2-222ENST00000584908 DNAH11Q96DT5 4516 aa11.01□□□□□ -0.65
ERBB2-222ENST00000584908 TRBV7-3A0A075B6L6 115 aa11.01□□□□□ -0.65
ERBB2-222ENST00000584908 A0A087WWC5 75 aa11.01□□□□□ -0.65
ERBB2-222ENST00000584908 ZNF727A8MUV8 499 aa11.01□□□□□ -0.65
ERBB2-222ENST00000584908 UBE2D3P61077 147 aa11.01□□□□□ -0.65
ERBB2-222ENST00000584908 UBE2D2P62837 147 aa11.01□□□□□ -0.65
ERBB2-222ENST00000584908 RPL36AP83881 106 aaKnown RBP11.01□□□□□ -0.65
ERBB2-222ENST00000584908 ZNF56Q15929 161 aa11.01□□□□□ -0.65
ERBB2-222ENST00000584908 CT83Q5H943 113 aa11.01□□□□□ -0.65
ERBB2-222ENST00000584908 OR10J3Q5JRS4 329 aa11.01□□□□□ -0.65
ERBB2-222ENST00000584908 C10orf126Q8N4M7 172 aa11.01□□□□□ -0.65
ERBB2-222ENST00000584908 RPL36ALQ969Q0 106 aaKnown RBP11.01□□□□□ -0.65
ERBB2-222ENST00000584908 SMIM17P0DL12 118 aa11□□□□□ -0.65
ERBB2-222ENST00000584908 SSTP61278 116 aa11□□□□□ -0.65
ERBB2-222ENST00000584908 FAM74A3Q4VXF1 159 aa11□□□□□ -0.65
ERBB2-222ENST00000584908 NEXN-AS1Q8NBZ9 246 aa11□□□□□ -0.65
ERBB2-222ENST00000584908 GTSF1Q8WW33 167 aa11□□□□□ -0.65
ERBB2-222ENST00000584908 A8MWL6 223 aa10.99□□□□□ -0.65
ERBB2-222ENST00000584908 C9JQL5 133 aa10.99□□□□□ -0.65
ERBB2-222ENST00000584908 GATCO43716 136 aaKnown RBP10.99□□□□□ -0.65
ERBB2-222ENST00000584908 TRGC1P0CF51 173 aa10.99□□□□□ -0.65
ERBB2-222ENST00000584908 NTF3P20783 257 aa10.99□□□□□ -0.65
ERBB2-222ENST00000584908 FOXA3P55318 350 aaPredicted RBP10.99□□□□□ -0.65
ERBB2-222ENST00000584908 PEA15Q15121 130 aa10.99□□□□□ -0.65
ERBB2-222ENST00000584908 ERVFC1-1P60608 527 aa10.98□□□□□ -0.65
ERBB2-222ENST00000584908 SRSF3P84103 164 aaKnown RBP10.98□□□□□ -0.65
ERBB2-222ENST00000584908 NFE4Q86UQ8 179 aa10.98□□□□□ -0.65
ERBB2-222ENST00000584908 OSTCQ9NRP0 149 aa10.98□□□□□ -0.65
ERBB2-222ENST00000584908 F5H697 171 aa10.97□□□□□ -0.65
ERBB2-222ENST00000584908 FAM231BA6NCW3 169 aa10.96□□□□□ -0.65
ERBB2-222ENST00000584908 IBA57-AS1B1ANH7 110 aa10.96□□□□□ -0.65
ERBB2-222ENST00000584908 M0QY20 66 aa10.96□□□□□ -0.65
ERBB2-222ENST00000584908 TMEM241Q24JQ0 296 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms