RNA–Protein interactions for RNA: ENST00000582648.5

ERBB2-211, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-211ENST00000582648 LY96Q9Y6Y9 160 aa12.29□□□□□ -0.44
ERBB2-211ENST00000582648 PKHD1P08F94 4074 aa12.29□□□□□ -0.44
ERBB2-211ENST00000582648 CXCL1P09341 107 aa12.28□□□□□ -0.44
ERBB2-211ENST00000582648 GZMBP10144 247 aa12.28□□□□□ -0.44
ERBB2-211ENST00000582648 TAGLN2P37802 199 aaKnown RBP12.28□□□□□ -0.44
ERBB2-211ENST00000582648 DAZAP1Q96EP5 407 aaKnown RBP12.28□□□□□ -0.44
ERBB2-211ENST00000582648 TPPP3Q9BW30 176 aa12.28□□□□□ -0.44
ERBB2-211ENST00000582648 Q9UF83 564 aa12.28□□□□□ -0.44
ERBB2-211ENST00000582648 OR2D3Q8NGH3 330 aa12.27□□□□□ -0.45
ERBB2-211ENST00000582648 RBFOX3A6NFN3 312 aa12.26□□□□□ -0.45
ERBB2-211ENST00000582648 SNAI2O43623 268 aa12.26□□□□□ -0.45
ERBB2-211ENST00000582648 CRYGDP07320 174 aa12.26□□□□□ -0.45
ERBB2-211ENST00000582648 CEBPGP53567 150 aa12.26□□□□□ -0.45
ERBB2-211ENST00000582648 OR10J3Q5JRS4 329 aa12.26□□□□□ -0.45
ERBB2-211ENST00000582648 SPANXN1Q5VSR9 72 aa12.26□□□□□ -0.45
ERBB2-211ENST00000582648 ATP6V0E2Q8NHE4 81 aa12.26□□□□□ -0.45
ERBB2-211ENST00000582648 SMIM12Q96EX1 92 aa12.26□□□□□ -0.45
ERBB2-211ENST00000582648 C19orf71A6NCJ1 209 aa12.25□□□□□ -0.45
ERBB2-211ENST00000582648 ZNF56Q15929 161 aa12.25□□□□□ -0.45
ERBB2-211ENST00000582648 TOR2AQ5JU69 321 aa12.25□□□□□ -0.45
ERBB2-211ENST00000582648 TNFRSF18Q9Y5U5 241 aa12.25□□□□□ -0.45
ERBB2-211ENST00000582648 DNAH11Q96DT5 4516 aa12.24□□□□□ -0.45
ERBB2-211ENST00000582648 P01737 135 aa12.24□□□□□ -0.45
ERBB2-211ENST00000582648 OR5AL1P0C617 328 aa12.24□□□□□ -0.45
ERBB2-211ENST00000582648 DNAH10OSP0CZ25 163 aa12.24□□□□□ -0.45
ERBB2-211ENST00000582648 LINC00694P0DN24 101 aa12.24□□□□□ -0.45
ERBB2-211ENST00000582648 EVI2AP22794 236 aa12.24□□□□□ -0.45
ERBB2-211ENST00000582648 TIRAPP58753 221 aa12.24□□□□□ -0.45
ERBB2-211ENST00000582648 LYPD6BQ8NI32 183 aa12.24□□□□□ -0.45
ERBB2-211ENST00000582648 GTSF1LQ9H1H1 148 aa12.24□□□□□ -0.45
ERBB2-211ENST00000582648 TRAV8-6A0A0B4J262 113 aa12.23□□□□□ -0.45
ERBB2-211ENST00000582648 FER1L6-AS1Q8NA97 138 aa12.23□□□□□ -0.45
ERBB2-211ENST00000582648 SSBP4Q9BWG4 385 aaPredicted RBP12.23□□□□□ -0.45
ERBB2-211ENST00000582648 DYNC1H1Q14204 4646 aaKnown RBP12.22□□□□□ -0.45
ERBB2-211ENST00000582648 TRAV9-2A0A087WT02 112 aa12.22□□□□□ -0.45
ERBB2-211ENST00000582648 IGHV3-38A0A0C4DH36 116 aa12.22□□□□□ -0.45
ERBB2-211ENST00000582648 RPS20P60866 119 aaKnown RBP12.22□□□□□ -0.45
ERBB2-211ENST00000582648 LELP1Q5T871 98 aa12.22□□□□□ -0.45
ERBB2-211ENST00000582648 BIN3Q9NQY0 253 aa12.22□□□□□ -0.45
ERBB2-211ENST00000582648 K7EN84 100 aa12.21□□□□□ -0.45
ERBB2-211ENST00000582648 IGLC6P0CF74 106 aa12.21□□□□□ -0.45
ERBB2-211ENST00000582648 EIF5A2Q9GZV4 153 aaKnown RBP12.21□□□□□ -0.45
ERBB2-211ENST00000582648 RNASE7Q9H1E1 156 aaKnown RBP12.21□□□□□ -0.45
ERBB2-211ENST00000582648 TMEM250H0YL14 139 aa12.2□□□□□ -0.46
ERBB2-211ENST00000582648 IGHV3-30P01768 117 aa12.2□□□□□ -0.46
ERBB2-211ENST00000582648 IGHV3-33P01772 117 aa12.2□□□□□ -0.46
ERBB2-211ENST00000582648 IGHV3-30-3P0DP02 117 aa12.2□□□□□ -0.46
ERBB2-211ENST00000582648 IGHV3-30-5P0DP03 117 aa12.2□□□□□ -0.46
ERBB2-211ENST00000582648 BTF3P20290 206 aaKnown RBP12.2□□□□□ -0.46
ERBB2-211ENST00000582648 Q6ZRN7 208 aaPredicted RBP12.2□□□□□ -0.46
ERBB2-211ENST00000582648 NUDT10Q8NFP7 164 aa12.2□□□□□ -0.46
ERBB2-211ENST00000582648 NUDT11Q96G61 164 aa12.2□□□□□ -0.46
ERBB2-211ENST00000582648 AP1S3Q96PC3 154 aa12.2□□□□□ -0.46
ERBB2-211ENST00000582648 XKRY2A2RUG3 117 aa12.19□□□□□ -0.46
ERBB2-211ENST00000582648 OCC1Q8TAD7 63 aa12.19□□□□□ -0.46
ERBB2-211ENST00000582648 MSRB1Q9NZV6 116 aa12.19□□□□□ -0.46
ERBB2-211ENST00000582648 F5H697 171 aa12.18□□□□□ -0.46
ERBB2-211ENST00000582648 SMIM17P0DL12 118 aa12.18□□□□□ -0.46
ERBB2-211ENST00000582648 RAB4BP61018 213 aa12.18□□□□□ -0.46
ERBB2-211ENST00000582648 RPL36AP83881 106 aaKnown RBP12.18□□□□□ -0.46
ERBB2-211ENST00000582648 LINC01556Q5JQF7 62 aa12.18□□□□□ -0.46
ERBB2-211ENST00000582648 Q8N3U1 123 aa12.18□□□□□ -0.46
ERBB2-211ENST00000582648 C10orf126Q8N4M7 172 aa12.18□□□□□ -0.46
ERBB2-211ENST00000582648 RPL36ALQ969Q0 106 aaKnown RBP12.18□□□□□ -0.46
ERBB2-211ENST00000582648 FAM210AQ96ND0 272 aa12.18□□□□□ -0.46
ERBB2-211ENST00000582648 RPP21Q9H633 154 aaKnown RBP12.18□□□□□ -0.46
ERBB2-211ENST00000582648 TRBV10-1A0A0K0K1A3 114 aa12.17□□□□□ -0.46
ERBB2-211ENST00000582648 MGPP08493 103 aa12.17□□□□□ -0.46
ERBB2-211ENST00000582648 LYZL1Q6UWQ5 148 aa12.17□□□□□ -0.46
ERBB2-211ENST00000582648 KIAA1109Q2LD37 5005 aa12.16□□□□□ -0.46
ERBB2-211ENST00000582648 CACNG7P62955 275 aa12.16□□□□□ -0.46
ERBB2-211ENST00000582648 SPATA12Q7Z6I5 190 aa12.16□□□□□ -0.46
ERBB2-211ENST00000582648 NFE4Q86UQ8 179 aa12.16□□□□□ -0.46
ERBB2-211ENST00000582648 SMIM7Q9BQ49 75 aa12.16□□□□□ -0.46
ERBB2-211ENST00000582648 Q9HAA7 133 aa12.16□□□□□ -0.46
ERBB2-211ENST00000582648 TRBV7-3A0A075B6L6 115 aa12.15□□□□□ -0.46
ERBB2-211ENST00000582648 C16orf90A8MZG2 172 aa12.15□□□□□ -0.46
ERBB2-211ENST00000582648 K7EP13 123 aa12.15□□□□□ -0.46
ERBB2-211ENST00000582648 UBE2D3P61077 147 aa12.15□□□□□ -0.46
ERBB2-211ENST00000582648 UBE2D2P62837 147 aa12.15□□□□□ -0.46
ERBB2-211ENST00000582648 NEXN-AS1Q8NBZ9 246 aa12.15□□□□□ -0.46
ERBB2-211ENST00000582648 KIF25-AS1Q9Y6Z4 181 aa12.15□□□□□ -0.46
ERBB2-211ENST00000582648 SRP19P09132 144 aaKnown RBP12.14□□□□□ -0.47
ERBB2-211ENST00000582648 TEX261Q6UWH6 196 aa12.14□□□□□ -0.47
ERBB2-211ENST00000582648 A0A087WWC5 75 aa12.13□□□□□ -0.47
ERBB2-211ENST00000582648 F2Z2F3 143 aa12.13□□□□□ -0.47
ERBB2-211ENST00000582648 CTRLP40313 264 aa12.13□□□□□ -0.47
ERBB2-211ENST00000582648 ERVFC1-1P60608 527 aa12.13□□□□□ -0.47
ERBB2-211ENST00000582648 OR10G8Q8NGN5 311 aa12.13□□□□□ -0.47
ERBB2-211ENST00000582648 ZNF727A8MUV8 499 aa12.12□□□□□ -0.47
ERBB2-211ENST00000582648 GATCO43716 136 aaKnown RBP12.12□□□□□ -0.47
ERBB2-211ENST00000582648 KRTAP10-2P60368 255 aa12.12□□□□□ -0.47
ERBB2-211ENST00000582648 HERC2O95714 4834 aa12.11□□□□□ -0.47
ERBB2-211ENST00000582648 IBA57-AS1B1ANH7 110 aa12.11□□□□□ -0.47
ERBB2-211ENST00000582648 TRGC1P0CF51 173 aa12.11□□□□□ -0.47
ERBB2-211ENST00000582648 NTF3P20783 257 aa12.11□□□□□ -0.47
ERBB2-211ENST00000582648 FUSP35637 526 aaKnown RBP eCLIP12.11□□□□□ -0.47
ERBB2-211ENST00000582648 TWIST1Q15672 202 aa12.11□□□□□ -0.47
ERBB2-211ENST00000582648 SUMO4Q6EEV6 95 aa12.11□□□□□ -0.47
ERBB2-211ENST00000582648 PSCAO43653 123 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms