RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 DPH3P1Q9H4G8 78 aa9.11□□□□□ -0.95
SRSF1-204ENST00000581979 C14orf178Q8N769 122 aaPredicted RBP9.11□□□□□ -0.95
SRSF1-204ENST00000581979 CSTL1Q9H114 145 aa9.11□□□□□ -0.95
SRSF1-204ENST00000581979 MUC4Q99102 2169 aa9.1□□□□□ -0.95
SRSF1-204ENST00000581979 SMKR1H3BMG3 65 aa9.1□□□□□ -0.95
SRSF1-204ENST00000581979 SERF1AO75920 110 aa9.1□□□□□ -0.95
SRSF1-204ENST00000581979 NCR2O95944 276 aa9.1□□□□□ -0.95
SRSF1-204ENST00000581979 SMIM17P0DL12 118 aa9.1□□□□□ -0.95
SRSF1-204ENST00000581979 MUC7Q8TAX7 377 aa9.1□□□□□ -0.95
SRSF1-204ENST00000581979 PRELID3AQ96N28 172 aa9.1□□□□□ -0.95
SRSF1-204ENST00000581979 GSN-AS1Q9NRJ2 163 aa9.1□□□□□ -0.95
SRSF1-204ENST00000581979 PPBPP02775 128 aa9.09□□□□□ -0.95
SRSF1-204ENST00000581979 MGPP08493 103 aa9.09□□□□□ -0.95
SRSF1-204ENST00000581979 AKR1D1P51857 326 aa9.09□□□□□ -0.95
SRSF1-204ENST00000581979 RYR3Q15413 4870 aa9.09□□□□□ -0.95
SRSF1-204ENST00000581979 NUPR1O60356 82 aa9.08□□□□□ -0.96
SRSF1-204ENST00000581979 AZU1P20160 251 aa9.08□□□□□ -0.96
SRSF1-204ENST00000581979 ZNF876PQ49A33 203 aa9.08□□□□□ -0.96
SRSF1-204ENST00000581979 C11orf72Q8NBR9 251 aa9.08□□□□□ -0.96
SRSF1-204ENST00000581979 CSNK1G2-AS1Q8NCQ2 148 aa9.08□□□□□ -0.96
SRSF1-204ENST00000581979 M0R2P5 195 aa9.08□□□□□ -0.96
SRSF1-204ENST00000581979 FABP4P15090 132 aa9.08□□□□□ -0.96
SRSF1-204ENST00000581979 RNASEKQ6P5S7 137 aaKnown RBP9.08□□□□□ -0.96
SRSF1-204ENST00000581979 SPXQ9BT56 116 aa9.08□□□□□ -0.96
SRSF1-204ENST00000581979 JPT2Q9H910 190 aa9.08□□□□□ -0.96
SRSF1-204ENST00000581979 A0A087WWL8 130 aa9.07□□□□□ -0.96
SRSF1-204ENST00000581979 TRAV26-2A0A0B4J265 109 aa9.07□□□□□ -0.96
SRSF1-204ENST00000581979 IFITM10A6NMD0 228 aa9.07□□□□□ -0.96
SRSF1-204ENST00000581979 APOC4P55056 127 aa9.07□□□□□ -0.96
SRSF1-204ENST00000581979 LINC00310P59036 64 aa9.07□□□□□ -0.96
SRSF1-204ENST00000581979 CASC10Q5T4H9 136 aa9.07□□□□□ -0.96
SRSF1-204ENST00000581979 MRAP2Q96G30 205 aa9.07□□□□□ -0.96
SRSF1-204ENST00000581979 DNAH7Q8WXX0 4024 aa9.07□□□□□ -0.96
SRSF1-204ENST00000581979 NPYP01303 97 aa9.06□□□□□ -0.96
SRSF1-204ENST00000581979 ESDP10768 282 aa9.06□□□□□ -0.96
SRSF1-204ENST00000581979 FAM74A4Q5TZK3 123 aa9.06□□□□□ -0.96
SRSF1-204ENST00000581979 NIT1Q86X76 327 aa9.06□□□□□ -0.96
SRSF1-204ENST00000581979 TMEM263Q8WUH6 116 aaKnown RBP9.06□□□□□ -0.96
SRSF1-204ENST00000581979 TMEM18Q96B42 140 aa9.06□□□□□ -0.96
SRSF1-204ENST00000581979 SPATA25Q9BR10 227 aa9.06□□□□□ -0.96
SRSF1-204ENST00000581979 SAMD10Q9BYL1 202 aa9.06□□□□□ -0.96
SRSF1-204ENST00000581979 LAMTOR2Q9Y2Q5 125 aa9.06□□□□□ -0.96
SRSF1-204ENST00000581979 KIF25-AS1Q9Y6Z4 181 aa9.06□□□□□ -0.96
SRSF1-204ENST00000581979 KIR2DL5BA0A0G2JN68 375 aa9.05□□□□□ -0.96
SRSF1-204ENST00000581979 KIR2DL5BA0A0G2JPC4 375 aa9.05□□□□□ -0.96
SRSF1-204ENST00000581979 LOC389332A0A1B0GUA5 103 aa9.05□□□□□ -0.96
SRSF1-204ENST00000581979 GAS8-AS1O95177 125 aa9.05□□□□□ -0.96
SRSF1-204ENST00000581979 GATA1P15976 413 aaPredicted RBP9.05□□□□□ -0.96
SRSF1-204ENST00000581979 RRN3P1Q2M238 152 aa9.05□□□□□ -0.96
SRSF1-204ENST00000581979 ZNF705AQ6ZN79 300 aaPredicted RBP9.05□□□□□ -0.96
SRSF1-204ENST00000581979 KIR2DL5AQ8N109 375 aa9.05□□□□□ -0.96
SRSF1-204ENST00000581979 KIR2DL5BQ8NHK3 375 aa9.05□□□□□ -0.96
SRSF1-204ENST00000581979 PRSS3P2Q8NHM4 247 aa9.05□□□□□ -0.96
SRSF1-204ENST00000581979 RNASE8Q8TDE3 154 aaKnown RBP9.05□□□□□ -0.96
SRSF1-204ENST00000581979 PTH2Q96A98 100 aa9.05□□□□□ -0.96
SRSF1-204ENST00000581979 C16orf74Q96GX8 76 aa9.05□□□□□ -0.96
SRSF1-204ENST00000581979 HIST1H2BLQ99880 126 aa9.05□□□□□ -0.96
SRSF1-204ENST00000581979 MAP1LC3AQ9H492 121 aa9.05□□□□□ -0.96
SRSF1-204ENST00000581979 EDA2RQ9HAV5 297 aa9.05□□□□□ -0.96
SRSF1-204ENST00000581979 F5H697 171 aa9.05□□□□□ -0.96
SRSF1-204ENST00000581979 HSBP1O75506 76 aa9.05□□□□□ -0.96
SRSF1-204ENST00000581979 TNFRSF6BO95407 300 aa9.05□□□□□ -0.96
SRSF1-204ENST00000581979 MRPL16Q9NX20 251 aaKnown RBP9.05□□□□□ -0.96
SRSF1-204ENST00000581979 LINC00614P0C842 121 aa9.04□□□□□ -0.96
SRSF1-204ENST00000581979 PMCHP20382 165 aa9.04□□□□□ -0.96
SRSF1-204ENST00000581979 ZNF56Q15929 161 aa9.04□□□□□ -0.96
SRSF1-204ENST00000581979 PIK3CD-AS1Q5SR53 167 aa9.04□□□□□ -0.96
SRSF1-204ENST00000581979 FA2HQ7L5A8 372 aa9.04□□□□□ -0.96
SRSF1-204ENST00000581979 POM121L12Q8N7R1 296 aa9.04□□□□□ -0.96
SRSF1-204ENST00000581979 IL17DQ8TAD2 202 aa9.04□□□□□ -0.96
SRSF1-204ENST00000581979 CHCHD1Q96BP2 118 aaKnown RBP9.04□□□□□ -0.96
SRSF1-204ENST00000581979 URB1-AS1Q96HZ7 61 aa9.04□□□□□ -0.96
SRSF1-204ENST00000581979 PACRGQ96M98 296 aaPredicted RBP9.04□□□□□ -0.96
SRSF1-204ENST00000581979 A8MWV9 139 aa9.03□□□□□ -0.96
SRSF1-204ENST00000581979 CRYGDP07320 174 aa9.03□□□□□ -0.96
SRSF1-204ENST00000581979 IFI27P40305 119 aaPredicted RBP9.03□□□□□ -0.96
SRSF1-204ENST00000581979 AMTP48728 403 aa9.03□□□□□ -0.96
SRSF1-204ENST00000581979 LINC00315P59091 139 aa9.03□□□□□ -0.96
SRSF1-204ENST00000581979 OR10D4PQ8NGN7 298 aa9.03□□□□□ -0.96
SRSF1-204ENST00000581979 TRGV1A0A0A0MS02 117 aa9.02□□□□□ -0.96
SRSF1-204ENST00000581979 SUMO4Q6EEV6 95 aa9.02□□□□□ -0.96
SRSF1-204ENST00000581979 NRACQ8N912 160 aa9.02□□□□□ -0.96
SRSF1-204ENST00000581979 FAM19A2Q8N3H0 131 aa9.02□□□□□ -0.97
SRSF1-204ENST00000581979 RASL10AQ92737 203 aa9.02□□□□□ -0.97
SRSF1-204ENST00000581979 NDUFAF3Q9BU61 184 aa9.02□□□□□ -0.97
SRSF1-204ENST00000581979 NOP10Q9NPE3 64 aaKnown RBP9.02□□□□□ -0.97
SRSF1-204ENST00000581979 PPP1R17O96001 155 aa9.01□□□□□ -0.97
SRSF1-204ENST00000581979 DEFB135Q30KP9 77 aa9.01□□□□□ -0.97
SRSF1-204ENST00000581979 RPL39LQ96EH5 51 aaKnown RBP9.01□□□□□ -0.97
SRSF1-204ENST00000581979 AP5S1Q9NUS5 200 aa9.01□□□□□ -0.97
SRSF1-204ENST00000581979 TENM2Q9NT68 2774 aa9.01□□□□□ -0.97
SRSF1-204ENST00000581979 IGHV3-73A0A0B4J1V6 119 aa9□□□□□ -0.97
SRSF1-204ENST00000581979 PLAC8L1A1L4L8 177 aa9□□□□□ -0.97
SRSF1-204ENST00000581979 SMIM9A6NGZ8 99 aa9□□□□□ -0.97
SRSF1-204ENST00000581979 RS1O15537 224 aa9□□□□□ -0.97
SRSF1-204ENST00000581979 DAZ2Q13117 558 aaKnown RBP9□□□□□ -0.97
SRSF1-204ENST00000581979 CFAP126Q5VTH2 177 aa9□□□□□ -0.97
SRSF1-204ENST00000581979 NXT2Q9NPJ8 142 aaKnown RBP9□□□□□ -0.97
SRSF1-204ENST00000581979 DYNC2H1Q8NCM8 4307 aaKnown RBP9□□□□□ -0.97
SRSF1-204ENST00000581979 RHODO00212 210 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 204.6 ms