RNA–Protein interactions for RNA: ENST00000579175.5

CDK5RAP3-212, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 867 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-212ENST00000579175 LINC00612Q8N6U2 182 aa8.67□□□□□ -1.02
CDK5RAP3-212ENST00000579175 NAT8BQ9UHF3 227 aa8.67□□□□□ -1.02
CDK5RAP3-212ENST00000579175 LENEPQ9Y5L5 61 aa8.67□□□□□ -1.02
CDK5RAP3-212ENST00000579175 A0A096LPF7 62 aa8.66□□□□□ -1.02
CDK5RAP3-212ENST00000579175 PHOX2AO14813 284 aa8.66□□□□□ -1.02
CDK5RAP3-212ENST00000579175 MT-ND6P03923 174 aa8.66□□□□□ -1.02
CDK5RAP3-212ENST00000579175 TRGC2P03986 189 aa8.66□□□□□ -1.02
CDK5RAP3-212ENST00000579175 LEPP41159 167 aa8.66□□□□□ -1.02
CDK5RAP3-212ENST00000579175 SMUG1Q53HV7 270 aa8.66□□□□□ -1.02
CDK5RAP3-212ENST00000579175 TMEM78Q5T7P6 136 aa8.66□□□□□ -1.02
CDK5RAP3-212ENST00000579175 WDR73Q6P4I2 378 aa8.66□□□□□ -1.02
CDK5RAP3-212ENST00000579175 ATP5L2Q7Z4Y8 100 aa8.66□□□□□ -1.02
CDK5RAP3-212ENST00000579175 ZFP82Q8N141 532 aa8.66□□□□□ -1.02
CDK5RAP3-212ENST00000579175 VGLL1Q99990 258 aa8.66□□□□□ -1.02
CDK5RAP3-212ENST00000579175 TNFRSF18Q9Y5U5 241 aa8.66□□□□□ -1.02
CDK5RAP3-212ENST00000579175 TRGV1A0A0A0MS02 117 aa8.65□□□□□ -1.02
CDK5RAP3-212ENST00000579175 TRBV7-9A0A0J9YWB2 115 aa8.65□□□□□ -1.02
CDK5RAP3-212ENST00000579175 PRAC2D3DTV9 90 aa8.65□□□□□ -1.02
CDK5RAP3-212ENST00000579175 S100A6P06703 90 aa8.65□□□□□ -1.02
CDK5RAP3-212ENST00000579175 ZNF138P52744 262 aa8.65□□□□□ -1.02
CDK5RAP3-212ENST00000579175 XGP55808 180 aa8.65□□□□□ -1.02
CDK5RAP3-212ENST00000579175 FAM162BQ5T6X4 162 aa8.65□□□□□ -1.02
CDK5RAP3-212ENST00000579175 Q6AWC8 147 aa8.65□□□□□ -1.02
CDK5RAP3-212ENST00000579175 CDPF1Q6NVV7 123 aa8.65□□□□□ -1.02
CDK5RAP3-212ENST00000579175 Q8TAT8 98 aa8.65□□□□□ -1.02
CDK5RAP3-212ENST00000579175 VSIG2Q96IQ7 327 aa8.65□□□□□ -1.02
CDK5RAP3-212ENST00000579175 C8orf49Q96NF6 230 aa8.65□□□□□ -1.02
CDK5RAP3-212ENST00000579175 GSN-AS1Q9NRJ2 163 aa8.65□□□□□ -1.02
CDK5RAP3-212ENST00000579175 LRP1BQ9NZR2 4599 aa8.64□□□□□ -1.03
CDK5RAP3-212ENST00000579175 PAX4O43316 350 aa8.64□□□□□ -1.03
CDK5RAP3-212ENST00000579175 NXPH4O95158 308 aa8.64□□□□□ -1.03
CDK5RAP3-212ENST00000579175 SMR3BP02814 79 aaPredicted RBP8.64□□□□□ -1.03
CDK5RAP3-212ENST00000579175 TCL1AP56279 114 aa8.64□□□□□ -1.03
CDK5RAP3-212ENST00000579175 RPS20P60866 119 aaKnown RBP8.64□□□□□ -1.03
CDK5RAP3-212ENST00000579175 DAZ2Q13117 558 aaKnown RBP8.64□□□□□ -1.03
CDK5RAP3-212ENST00000579175 Q6ZRN7 208 aaPredicted RBP8.64□□□□□ -1.03
CDK5RAP3-212ENST00000579175 OR2D3Q8NGH3 330 aa8.64□□□□□ -1.03
CDK5RAP3-212ENST00000579175 GNB1LQ9BYB4 327 aa8.64□□□□□ -1.03
CDK5RAP3-212ENST00000579175 ICOSQ9Y6W8 199 aa8.64□□□□□ -1.03
CDK5RAP3-212ENST00000579175 TRAV9-2A0A087WT02 112 aa8.63□□□□□ -1.03
CDK5RAP3-212ENST00000579175 XKRY2A2RUG3 117 aa8.63□□□□□ -1.03
CDK5RAP3-212ENST00000579175 HIGD1CA8MV81 97 aa8.63□□□□□ -1.03
CDK5RAP3-212ENST00000579175 HIST1H2BKO60814 126 aa8.63□□□□□ -1.03
CDK5RAP3-212ENST00000579175 SH2D1AO60880 128 aa8.63□□□□□ -1.03
CDK5RAP3-212ENST00000579175 HLA-DQA1P01909 254 aa8.63□□□□□ -1.03
CDK5RAP3-212ENST00000579175 HIST1H2BJP06899 126 aa8.63□□□□□ -1.03
CDK5RAP3-212ENST00000579175 TRGC1P0CF51 173 aa8.63□□□□□ -1.03
CDK5RAP3-212ENST00000579175 HIST1H2BOP23527 126 aa8.63□□□□□ -1.03
CDK5RAP3-212ENST00000579175 HIST1H2BBP33778 126 aa8.63□□□□□ -1.03
CDK5RAP3-212ENST00000579175 CRIP1P50238 77 aa8.63□□□□□ -1.03
CDK5RAP3-212ENST00000579175 FOXA3P55318 350 aaPredicted RBP8.63□□□□□ -1.03
CDK5RAP3-212ENST00000579175 HIST1H2BDP58876 126 aa8.63□□□□□ -1.03
CDK5RAP3-212ENST00000579175 HIST1H2BCP62807 126 aa8.63□□□□□ -1.03
CDK5RAP3-212ENST00000579175 HIST2H2BEQ16778 126 aa8.63□□□□□ -1.03
CDK5RAP3-212ENST00000579175 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.63□□□□□ -1.03
CDK5RAP3-212ENST00000579175 NFE4Q86UQ8 179 aa8.63□□□□□ -1.03
CDK5RAP3-212ENST00000579175 NUP35Q8NFH5 326 aa8.63□□□□□ -1.03
CDK5RAP3-212ENST00000579175 HIST1H2BHQ93079 126 aa8.63□□□□□ -1.03
CDK5RAP3-212ENST00000579175 LINC00477Q96M19 166 aa8.63□□□□□ -1.03
CDK5RAP3-212ENST00000579175 HIST1H2BNQ99877 126 aa8.63□□□□□ -1.03
CDK5RAP3-212ENST00000579175 HIST1H2BMQ99879 126 aa8.63□□□□□ -1.03
CDK5RAP3-212ENST00000579175 AGPAT4-IT1Q9H0P7 198 aa8.63□□□□□ -1.03
CDK5RAP3-212ENST00000579175 MDFICQ9P1T7 246 aa8.63□□□□□ -1.03
CDK5RAP3-212ENST00000579175 TRAPPC1Q9Y5R8 145 aa8.63□□□□□ -1.03
CDK5RAP3-212ENST00000579175 APOBP04114 4563 aaKnown RBP8.62□□□□□ -1.03
CDK5RAP3-212ENST00000579175 IGHV3-53P01767 116 aa8.62□□□□□ -1.03
CDK5RAP3-212ENST00000579175 DNAH10OSP0CZ25 163 aa8.62□□□□□ -1.03
CDK5RAP3-212ENST00000579175 ERCC8Q13216 396 aa8.62□□□□□ -1.03
CDK5RAP3-212ENST00000579175 A0A1B0GXF2 115 aa8.61□□□□□ -1.03
CDK5RAP3-212ENST00000579175 C5orf52A6NGY3 159 aa8.61□□□□□ -1.03
CDK5RAP3-212ENST00000579175 FABP5P3A8MUU1 101 aa8.61□□□□□ -1.03
CDK5RAP3-212ENST00000579175 FAM229AH3BQW9 127 aa8.61□□□□□ -1.03
CDK5RAP3-212ENST00000579175 KRTAP10-1P60331 282 aa8.61□□□□□ -1.03
CDK5RAP3-212ENST00000579175 GTSF1Q8WW33 167 aa8.61□□□□□ -1.03
CDK5RAP3-212ENST00000579175 ODF3Q96PU9 254 aa8.61□□□□□ -1.03
CDK5RAP3-212ENST00000579175 A0A087WTM6 91 aa8.6□□□□□ -1.03
CDK5RAP3-212ENST00000579175 A0A1B0GW15 77 aa8.6□□□□□ -1.03
CDK5RAP3-212ENST00000579175 C7orf71A4D174 169 aa8.6□□□□□ -1.03
CDK5RAP3-212ENST00000579175 ZNF324O75467 553 aaPredicted RBP8.6□□□□□ -1.03
CDK5RAP3-212ENST00000579175 S100A8P05109 93 aa8.6□□□□□ -1.03
CDK5RAP3-212ENST00000579175 CRISP2P16562 243 aa8.6□□□□□ -1.03
CDK5RAP3-212ENST00000579175 RNASE4P34096 147 aaKnown RBP8.6□□□□□ -1.03
CDK5RAP3-212ENST00000579175 HBBP68871 147 aa8.6□□□□□ -1.03
CDK5RAP3-212ENST00000579175 FABP9Q0Z7S8 132 aa8.6□□□□□ -1.03
CDK5RAP3-212ENST00000579175 LINC01559Q495D7 138 aa8.6□□□□□ -1.03
CDK5RAP3-212ENST00000579175 MRPL54Q6P161 138 aaKnown RBP8.6□□□□□ -1.03
CDK5RAP3-212ENST00000579175 TMEM136Q6ZRR5 245 aa8.6□□□□□ -1.03
CDK5RAP3-212ENST00000579175 FAM19A4Q96LR4 140 aa8.6□□□□□ -1.03
CDK5RAP3-212ENST00000579175 MRPL18Q9H0U6 180 aaKnown RBP8.6□□□□□ -1.03
CDK5RAP3-212ENST00000579175 DNAH5Q8TE73 4624 aa8.6□□□□□ -1.03
CDK5RAP3-212ENST00000579175 J3QL48 77 aa8.59□□□□□ -1.03
CDK5RAP3-212ENST00000579175 GCSHP23434 173 aa8.59□□□□□ -1.03
CDK5RAP3-212ENST00000579175 ZNF80P51504 273 aaPredicted RBP8.59□□□□□ -1.03
CDK5RAP3-212ENST00000579175 MRPL23Q16540 153 aaKnown RBP8.59□□□□□ -1.03
CDK5RAP3-212ENST00000579175 COA6Q5JTJ3 125 aaKnown RBP8.59□□□□□ -1.03
CDK5RAP3-212ENST00000579175 LYPD5Q6UWN5 251 aa8.59□□□□□ -1.03
CDK5RAP3-212ENST00000579175 GATD1Q8NB37 220 aa8.59□□□□□ -1.03
CDK5RAP3-212ENST00000579175 BORCS7Q96B45 105 aa8.59□□□□□ -1.03
CDK5RAP3-212ENST00000579175 C18orf15Q96N68 181 aa8.59□□□□□ -1.03
CDK5RAP3-212ENST00000579175 PRO0255Q9UI72 69 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms