RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 A0A0J9YWU9 116 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 A0A1B0GX30 115 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 WIPF3A6NGB9 483 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 PRSS46E5RG02 174 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 J3QRE1 110 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 CRYGCP07315 174 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 Q8N976 141 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 USP34Q70CQ2 3546 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 EML6Q6ZMW3 1958 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 IGHV4-28A0A0C4DH34 117 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 TRBV10-1A0A0K0K1A3 114 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 FAM231BA6NCW3 169 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 J3QL48 77 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 PROP1O75360 226 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 ESDP10768 282 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 RSPO1Q2MKA7 263 aaPredicted RBP2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 MAJINQ3KP22 176 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 KPRPQ5T749 579 aaPredicted RBP2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 CBLN2Q8IUK8 224 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 SLC25A29Q8N8R3 303 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 GFRA4Q9GZZ7 299 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 RBM38Q9H0Z9 239 aaKnown RBP2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 ZNF702PQ9H963 129 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 SPANXA1Q9NS26 97 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 ZNF581Q9P0T4 197 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 HEATR5AQ86XA9 2040 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 A0A0J9YX75 114 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 A0A1B0GVG6 124 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 FAM229AH3BQW9 127 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 K7EIM0 57 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 FUSP35637 526 aaKnown RBP eCLIP2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 MPV17L2Q567V2 206 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 C9orf47Q6ZRZ4 202 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 ATOH7Q8N100 152 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 HIGD2AQ9BW72 106 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 GTSF1LQ9H1H1 148 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 LINC00474Q9P2X8 69 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 ANAPC1Q9H1A4 1944 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 DCHS1Q96JQ0 3298 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 MED12LQ86YW9 2145 aa2.24□□□□□ -2.05
SMCHD1-203ENST00000577880 IGKV2D-26A0A0A0MRZ7 120 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 TRAV26-2A0A0B4J265 109 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 PLP1P60201 277 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 UBE2D3P61077 147 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 Q6ZRM9 215 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 LINC01551Q86U37 167 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 DYNAPQ8N1N2 210 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 GFI1Q99684 422 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 C20orf78Q9BR46 151 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 GNB1LQ9BYB4 327 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 SETD2Q9BYW2 2564 aaPredicted RBP2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 IGLV5-52A0A0A0MRZ9 124 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 A0A1B0GV72 72 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 IGKV2-29A2NJV5 120 aaPredicted RBP2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 GAGE12HA6NDE8 117 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 SMKR1H3BMG3 65 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 I3L2K1 104 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 SERF1AO75920 110 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 NMBP08949 121 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 NANOS2P60321 138 aaKnown RBP2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 PRR20EP86478 221 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 PRR20CP86479 221 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 PRR20DP86480 221 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 PRR20BP86481 221 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 PRR20AP86496 221 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 GUSBP1Q15486 140 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 FAM19A2Q8N3H0 131 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 TMEM170AQ8WVE7 144 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 DOCK11Q5JSL3 2073 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 TRAV13-2A0A0B4J235 113 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 A0A0G2JRQ6 117 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 hADV29S1A0JD25 119 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 A8MWP6 167 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 TEX22C9J3V5 150 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 WIPF1O43516 503 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 SNAI2O43623 268 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 HERV-K104P63124 156 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 ZFP2Q6ZN57 461 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 Q8N1Y9 231 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 Q8N8P6 123 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 LYPD6BQ8NI32 183 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 DSCR8Q96T75 97 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 VSIRQ9H7M9 311 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 NCKAP5O14513 1909 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 C9JQL5 133 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 LTAP01374 205 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 C16orf95Q9H693 158 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 FNDC4Q9H6D8 234 aaPredicted RBP2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 ZNF706Q9Y5V0 76 aaPredicted RBP2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 C2orf16Q68DN1 1984 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 TRANK1O15050 2925 aa2.23□□□□□ -2.05
SMCHD1-203ENST00000577880 IGHV1-58A0A0C4DH39 117 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 TMEM213A2RRL7 107 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 FGF6P10767 208 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 LGALS9BQ3B8N2 356 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 HIGD2BQ4VC39 106 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 CT83Q5H943 113 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 FAM104BQ5XKR9 115 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 NUP35Q8NFH5 326 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms