RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 TRBV7-3A0A075B6L6 115 aa7.51□□□□□ -1.21
CTDNEP1-212ENST00000576613 A0A0D9SG52 128 aa7.51□□□□□ -1.21
CTDNEP1-212ENST00000576613 USP17L23D6RBM5 183 aa7.51□□□□□ -1.21
CTDNEP1-212ENST00000576613 HLA-DQA1P01909 254 aa7.51□□□□□ -1.21
CTDNEP1-212ENST00000576613 Q6ZRU5 148 aa7.51□□□□□ -1.21
CTDNEP1-212ENST00000576613 ZC2HC1AQ96GY0 325 aa7.51□□□□□ -1.21
CTDNEP1-212ENST00000576613 SFRP2Q96HF1 295 aa7.51□□□□□ -1.21
CTDNEP1-212ENST00000576613 PHLDA3Q9Y5J5 127 aa7.51□□□□□ -1.21
CTDNEP1-212ENST00000576613 ARL2-SNX15V9GYD0 113 aa7.51□□□□□ -1.21
CTDNEP1-212ENST00000576613 A0A087WWL8 130 aa7.5□□□□□ -1.21
CTDNEP1-212ENST00000576613 TRBV6-8A0A0A6YYG3 113 aa7.5□□□□□ -1.21
CTDNEP1-212ENST00000576613 SSNA1O43805 119 aa7.5□□□□□ -1.21
CTDNEP1-212ENST00000576613 CXorf1O96002 111 aa7.5□□□□□ -1.21
CTDNEP1-212ENST00000576613 MBP02144 154 aa7.5□□□□□ -1.21
CTDNEP1-212ENST00000576613 ANGP03950 147 aaKnown RBP7.5□□□□□ -1.21
CTDNEP1-212ENST00000576613 ARMS2P0C7Q2 107 aa7.5□□□□□ -1.21
CTDNEP1-212ENST00000576613 MT1HL1P0DM35 61 aa7.5□□□□□ -1.21
CTDNEP1-212ENST00000576613 UBE2D3P61077 147 aa7.5□□□□□ -1.21
CTDNEP1-212ENST00000576613 PKIAP61925 76 aa7.5□□□□□ -1.21
CTDNEP1-212ENST00000576613 UBE2D2P62837 147 aa7.5□□□□□ -1.21
CTDNEP1-212ENST00000576613 MIAQ16674 131 aa7.5□□□□□ -1.21
CTDNEP1-212ENST00000576613 DNLZQ5SXM8 178 aa7.5□□□□□ -1.21
CTDNEP1-212ENST00000576613 ENHOQ6UWT2 76 aa7.5□□□□□ -1.21
CTDNEP1-212ENST00000576613 C15orf54Q8N8G6 183 aa7.5□□□□□ -1.21
CTDNEP1-212ENST00000576613 C9orf163Q8N9P6 203 aa7.5□□□□□ -1.21
CTDNEP1-212ENST00000576613 A0A1W2PRE2 83 aa7.49□□□□□ -1.21
CTDNEP1-212ENST00000576613 KRBOX1C9JBD0 128 aa7.49□□□□□ -1.21
CTDNEP1-212ENST00000576613 INMT-MINDY4F8WBC2 141 aa7.49□□□□□ -1.21
CTDNEP1-212ENST00000576613 M0R036 132 aa7.49□□□□□ -1.21
CTDNEP1-212ENST00000576613 M0R381 172 aa7.49□□□□□ -1.21
CTDNEP1-212ENST00000576613 IFNA7P01567 189 aa7.49□□□□□ -1.21
CTDNEP1-212ENST00000576613 TPT1P13693 172 aaKnown RBP7.49□□□□□ -1.21
CTDNEP1-212ENST00000576613 RPL19P84098 196 aaKnown RBP7.49□□□□□ -1.21
CTDNEP1-212ENST00000576613 MPV17L2Q567V2 206 aa7.49□□□□□ -1.21
CTDNEP1-212ENST00000576613 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.49□□□□□ -1.21
CTDNEP1-212ENST00000576613 S100ZQ8WXG8 99 aa7.49□□□□□ -1.21
CTDNEP1-212ENST00000576613 PSMG3Q9BT73 122 aaPredicted RBP7.49□□□□□ -1.21
CTDNEP1-212ENST00000576613 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.49□□□□□ -1.21
CTDNEP1-212ENST00000576613 TRAV34A0A0B4J273 112 aa7.48□□□□□ -1.21
CTDNEP1-212ENST00000576613 PRSS1P07477 247 aa7.48□□□□□ -1.21
CTDNEP1-212ENST00000576613 LINC00299Q6ZSB3 139 aa7.48□□□□□ -1.21
CTDNEP1-212ENST00000576613 Q86TA4 180 aa7.48□□□□□ -1.21
CTDNEP1-212ENST00000576613 ZFP82Q8N141 532 aa7.48□□□□□ -1.21
CTDNEP1-212ENST00000576613 HSD17B11Q8NBQ5 300 aa7.48□□□□□ -1.21
CTDNEP1-212ENST00000576613 ACTR3CQ9C0K3 210 aaPredicted RBP7.48□□□□□ -1.21
CTDNEP1-212ENST00000576613 NDUFA13Q9P0J0 144 aa7.48□□□□□ -1.21
CTDNEP1-212ENST00000576613 GRIFINA4D1Z8 144 aa7.47□□□□□ -1.21
CTDNEP1-212ENST00000576613 PEX7O00628 323 aa7.47□□□□□ -1.21
CTDNEP1-212ENST00000576613 SERF2P84101 59 aa7.47□□□□□ -1.21
CTDNEP1-212ENST00000576613 FAM162BQ5T6X4 162 aa7.47□□□□□ -1.21
CTDNEP1-212ENST00000576613 OR10G8Q8NGN5 311 aa7.47□□□□□ -1.21
CTDNEP1-212ENST00000576613 CHCHD5Q9BSY4 110 aa7.47□□□□□ -1.21
CTDNEP1-212ENST00000576613 SH2D1AO60880 128 aa7.46□□□□□ -1.22
CTDNEP1-212ENST00000576613 PTTG1O95997 202 aa7.46□□□□□ -1.22
CTDNEP1-212ENST00000576613 ATP6V0CP27449 155 aa7.46□□□□□ -1.22
CTDNEP1-212ENST00000576613 SDIM1Q6ZPB5 146 aa7.46□□□□□ -1.22
CTDNEP1-212ENST00000576613 HIST1H2BAQ96A08 127 aa7.46□□□□□ -1.22
CTDNEP1-212ENST00000576613 MARVELD1Q9BSK0 173 aa7.46□□□□□ -1.22
CTDNEP1-212ENST00000576613 NKX6-2Q9C056 277 aaPredicted RBP7.46□□□□□ -1.22
CTDNEP1-212ENST00000576613 DPH3P1Q9H4G8 78 aa7.46□□□□□ -1.22
CTDNEP1-212ENST00000576613 ZFP30Q9Y2G7 519 aa7.46□□□□□ -1.22
CTDNEP1-212ENST00000576613 PANO1I0J062 215 aa7.45□□□□□ -1.22
CTDNEP1-212ENST00000576613 UPK1BO75841 260 aa7.45□□□□□ -1.22
CTDNEP1-212ENST00000576613 CRIP1P50238 77 aa7.45□□□□□ -1.22
CTDNEP1-212ENST00000576613 RAB4BP61018 213 aa7.45□□□□□ -1.22
CTDNEP1-212ENST00000576613 ZNF56Q15929 161 aa7.45□□□□□ -1.22
CTDNEP1-212ENST00000576613 TMEM97Q5BJF2 176 aa7.45□□□□□ -1.22
CTDNEP1-212ENST00000576613 CLRN3Q8NCR9 226 aa7.45□□□□□ -1.22
CTDNEP1-212ENST00000576613 TNFSF18Q9UNG2 199 aa7.45□□□□□ -1.22
CTDNEP1-212ENST00000576613 TMSB15BA0A087X1C1 80 aa7.44□□□□□ -1.22
CTDNEP1-212ENST00000576613 UBE2G2P60604 165 aa7.44□□□□□ -1.22
CTDNEP1-212ENST00000576613 UBE2G1P62253 170 aa7.44□□□□□ -1.22
CTDNEP1-212ENST00000576613 CIRBPQ14011 172 aaKnown RBP7.44□□□□□ -1.22
CTDNEP1-212ENST00000576613 LINC01559Q495D7 138 aa7.44□□□□□ -1.22
CTDNEP1-212ENST00000576613 CLPSL2Q6UWE3 100 aa7.44□□□□□ -1.22
CTDNEP1-212ENST00000576613 COX8CQ7Z4L0 72 aa7.44□□□□□ -1.22
CTDNEP1-212ENST00000576613 NEXN-AS1Q8NBZ9 246 aa7.44□□□□□ -1.22
CTDNEP1-212ENST00000576613 DPH3Q96FX2 82 aa7.44□□□□□ -1.22
CTDNEP1-212ENST00000576613 RNF185Q96GF1 192 aa7.44□□□□□ -1.22
CTDNEP1-212ENST00000576613 PRR34Q9NV39 138 aa7.44□□□□□ -1.22
CTDNEP1-212ENST00000576613 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.43□□□□□ -1.22
CTDNEP1-212ENST00000576613 CNBPP62633 177 aaKnown RBP7.43□□□□□ -1.22
CTDNEP1-212ENST00000576613 LINC00269Q8N2A0 174 aa7.43□□□□□ -1.22
CTDNEP1-212ENST00000576613 FMC1Q96HJ9 113 aa7.43□□□□□ -1.22
CTDNEP1-212ENST00000576613 IGHV3-64A0A075B6Q5 118 aa7.42□□□□□ -1.22
CTDNEP1-212ENST00000576613 hDV102S1A0JD36 115 aa7.42□□□□□ -1.22
CTDNEP1-212ENST00000576613 RBX1P62877 108 aa7.42□□□□□ -1.22
CTDNEP1-212ENST00000576613 ZNF674Q2M3X9 581 aa7.42□□□□□ -1.22
CTDNEP1-212ENST00000576613 PRR27Q6MZM9 219 aa7.42□□□□□ -1.22
CTDNEP1-212ENST00000576613 AQP10Q96PS8 301 aa7.42□□□□□ -1.22
CTDNEP1-212ENST00000576613 AP5S1Q9NUS5 200 aa7.42□□□□□ -1.22
CTDNEP1-212ENST00000576613 RNF213Q63HN8 5207 aa7.41□□□□□ -1.22
CTDNEP1-212ENST00000576613 TRBV25-1A0A075B6N4 114 aa7.41□□□□□ -1.22
CTDNEP1-212ENST00000576613 CTXND1A0A1B0GTU2 59 aa7.41□□□□□ -1.22
CTDNEP1-212ENST00000576613 A6NHS1 94 aa7.41□□□□□ -1.22
CTDNEP1-212ENST00000576613 FAM74A7A6NL05 159 aa7.41□□□□□ -1.22
CTDNEP1-212ENST00000576613 KRTAP26-1Q6PEX3 210 aa7.41□□□□□ -1.22
CTDNEP1-212ENST00000576613 C7orf33Q8WU49 177 aa7.41□□□□□ -1.22
CTDNEP1-212ENST00000576613 DERL1Q9BUN8 251 aa7.41□□□□□ -1.22
CTDNEP1-212ENST00000576613 A0A087WYN8 130 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms