RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 GCSHP23434 173 aa6.48□□□□□ -1.37
NPLOC4-212ENST00000573328 EIF5AP63241 154 aaKnown RBP6.48□□□□□ -1.37
NPLOC4-212ENST00000573328 ZNF674Q2M3X9 581 aa6.48□□□□□ -1.37
NPLOC4-212ENST00000573328 LINC01559Q495D7 138 aa6.48□□□□□ -1.37
NPLOC4-212ENST00000573328 DNLZQ5SXM8 178 aa6.48□□□□□ -1.37
NPLOC4-212ENST00000573328 URGCP-MRPS24S4R325 110 aa6.48□□□□□ -1.37
NPLOC4-212ENST00000573328 A0A087WWC5 75 aa6.47□□□□□ -1.37
NPLOC4-212ENST00000573328 TRBV6-1A0A0K0K1D8 114 aa6.47□□□□□ -1.37
NPLOC4-212ENST00000573328 HMSDA8MTL9 139 aa6.47□□□□□ -1.37
NPLOC4-212ENST00000573328 EPM2AB3EWF7 344 aa6.47□□□□□ -1.37
NPLOC4-212ENST00000573328 S100A9P06702 114 aaKnown RBP6.47□□□□□ -1.37
NPLOC4-212ENST00000573328 H2AFB1P0C5Y9 115 aa6.47□□□□□ -1.37
NPLOC4-212ENST00000573328 KRTAP10-1P60331 282 aa6.47□□□□□ -1.37
NPLOC4-212ENST00000573328 LAGE3Q14657 143 aa6.47□□□□□ -1.37
NPLOC4-212ENST00000573328 PRR27Q6MZM9 219 aa6.47□□□□□ -1.37
NPLOC4-212ENST00000573328 COX8CQ7Z4L0 72 aa6.47□□□□□ -1.37
NPLOC4-212ENST00000573328 Q8N3U1 123 aa6.47□□□□□ -1.37
NPLOC4-212ENST00000573328 TM2D2Q9BX73 214 aa6.47□□□□□ -1.37
NPLOC4-212ENST00000573328 LINC00694P0DN24 101 aa6.46□□□□□ -1.38
NPLOC4-212ENST00000573328 RPL19P84098 196 aaKnown RBP6.46□□□□□ -1.38
NPLOC4-212ENST00000573328 ZNF56Q15929 161 aa6.46□□□□□ -1.38
NPLOC4-212ENST00000573328 TOR2AQ5JU69 321 aa6.46□□□□□ -1.38
NPLOC4-212ENST00000573328 UFSP1Q6NVU6 142 aa6.46□□□□□ -1.38
NPLOC4-212ENST00000573328 KCNIP4Q6PIL6 250 aa6.46□□□□□ -1.38
NPLOC4-212ENST00000573328 BAGE2Q86Y30 109 aa6.46□□□□□ -1.38
NPLOC4-212ENST00000573328 NTN5Q8WTR8 489 aaPredicted RBP6.46□□□□□ -1.38
NPLOC4-212ENST00000573328 MBD3L1Q8WWY6 194 aa6.46□□□□□ -1.38
NPLOC4-212ENST00000573328 FRZBQ92765 325 aa6.46□□□□□ -1.38
NPLOC4-212ENST00000573328 SFRP2Q96HF1 295 aa6.46□□□□□ -1.38
NPLOC4-212ENST00000573328 Q9UF83 564 aa6.46□□□□□ -1.38
NPLOC4-212ENST00000573328 TRAV8-3A0A0A6YYJ7 113 aa6.45□□□□□ -1.38
NPLOC4-212ENST00000573328 LRCOL1A6NCL2 159 aa6.45□□□□□ -1.38
NPLOC4-212ENST00000573328 RPL36AP83881 106 aaKnown RBP6.45□□□□□ -1.38
NPLOC4-212ENST00000573328 TMUB2Q71RG4 321 aa6.45□□□□□ -1.38
NPLOC4-212ENST00000573328 DAZ4Q86SG3 579 aaKnown RBP6.45□□□□□ -1.38
NPLOC4-212ENST00000573328 Q8N814 137 aa6.45□□□□□ -1.38
NPLOC4-212ENST00000573328 RPL36ALQ969Q0 106 aaKnown RBP6.45□□□□□ -1.38
NPLOC4-212ENST00000573328 DAZ3Q9NR90 486 aaKnown RBP6.45□□□□□ -1.38
NPLOC4-212ENST00000573328 A0A087WX48 190 aa6.44□□□□□ -1.38
NPLOC4-212ENST00000573328 LECT2O14960 151 aa6.44□□□□□ -1.38
NPLOC4-212ENST00000573328 XGP55808 180 aa6.44□□□□□ -1.38
NPLOC4-212ENST00000573328 SSTP61278 116 aa6.44□□□□□ -1.38
NPLOC4-212ENST00000573328 HAMPP81172 84 aa6.44□□□□□ -1.38
NPLOC4-212ENST00000573328 Q5VSD8 79 aa6.44□□□□□ -1.38
NPLOC4-212ENST00000573328 SPANXN1Q5VSR9 72 aa6.44□□□□□ -1.38
NPLOC4-212ENST00000573328 OR10AG1Q8NH19 301 aa6.44□□□□□ -1.38
NPLOC4-212ENST00000573328 RMI2Q96E14 147 aa6.44□□□□□ -1.38
NPLOC4-212ENST00000573328 MANBALQ9NQG1 85 aa6.44□□□□□ -1.38
NPLOC4-212ENST00000573328 GNG13Q9P2W3 67 aa6.44□□□□□ -1.38
NPLOC4-212ENST00000573328 IGKV2D-24A0A075B6R9 120 aa6.43□□□□□ -1.38
NPLOC4-212ENST00000573328 MUC21A0A0G2JKD1 596 aa6.43□□□□□ -1.38
NPLOC4-212ENST00000573328 TRBV10-1A0A0K0K1A3 114 aa6.43□□□□□ -1.38
NPLOC4-212ENST00000573328 MUC21A0A140T8X8 626 aa6.43□□□□□ -1.38
NPLOC4-212ENST00000573328 F5H697 171 aa6.43□□□□□ -1.38
NPLOC4-212ENST00000573328 TEX46H3BTG2 121 aa6.43□□□□□ -1.38
NPLOC4-212ENST00000573328 SMR3BP02814 79 aaPredicted RBP6.43□□□□□ -1.38
NPLOC4-212ENST00000573328 SMIM17P0DL12 118 aa6.43□□□□□ -1.38
NPLOC4-212ENST00000573328 RPL35P42766 123 aaKnown RBP6.43□□□□□ -1.38
NPLOC4-212ENST00000573328 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.43□□□□□ -1.38
NPLOC4-212ENST00000573328 KLK12Q9UKR0 248 aa6.43□□□□□ -1.38
NPLOC4-212ENST00000573328 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.42□□□□□ -1.38
NPLOC4-212ENST00000573328 TRBV7-3A0A075B6L6 115 aa6.42□□□□□ -1.38
NPLOC4-212ENST00000573328 CXCL1P09341 107 aa6.42□□□□□ -1.38
NPLOC4-212ENST00000573328 RAB4BP61018 213 aa6.42□□□□□ -1.38
NPLOC4-212ENST00000573328 EIF5AL1Q6IS14 154 aaKnown RBP6.42□□□□□ -1.38
NPLOC4-212ENST00000573328 NIT1Q86X76 327 aa6.42□□□□□ -1.38
NPLOC4-212ENST00000573328 UBE2WQ96B02 151 aa6.42□□□□□ -1.38
NPLOC4-212ENST00000573328 DAZAP1Q96EP5 407 aaKnown RBP6.42□□□□□ -1.38
NPLOC4-212ENST00000573328 DERL1Q9BUN8 251 aa6.42□□□□□ -1.38
NPLOC4-212ENST00000573328 MLST8Q9BVC4 326 aa6.42□□□□□ -1.38
NPLOC4-212ENST00000573328 TPPP3Q9BW30 176 aa6.42□□□□□ -1.38
NPLOC4-212ENST00000573328 COX11Q9Y6N1 276 aa6.42□□□□□ -1.38
NPLOC4-212ENST00000573328 TMEM262E9PQX1 116 aa6.41□□□□□ -1.38
NPLOC4-212ENST00000573328 SNAI2O43623 268 aa6.41□□□□□ -1.38
NPLOC4-212ENST00000573328 IFNA1P01562 189 aa6.41□□□□□ -1.38
NPLOC4-212ENST00000573328 CRPP02741 224 aa6.41□□□□□ -1.38
NPLOC4-212ENST00000573328 OR5AL1P0C617 328 aa6.41□□□□□ -1.38
NPLOC4-212ENST00000573328 INAFM2P0DMQ5 153 aa6.41□□□□□ -1.38
NPLOC4-212ENST00000573328 RAB5CP51148 216 aa6.41□□□□□ -1.38
NPLOC4-212ENST00000573328 UBE2D3P61077 147 aa6.41□□□□□ -1.38
NPLOC4-212ENST00000573328 UBE2D2P62837 147 aa6.41□□□□□ -1.38
NPLOC4-212ENST00000573328 WFDC2Q14508 124 aa6.41□□□□□ -1.38
NPLOC4-212ENST00000573328 ELOBQ15370 118 aa6.41□□□□□ -1.38
NPLOC4-212ENST00000573328 CENPWQ5EE01 88 aa6.41□□□□□ -1.38
NPLOC4-212ENST00000573328 NEXN-AS1Q8NBZ9 246 aa6.41□□□□□ -1.38
NPLOC4-212ENST00000573328 AP1S3Q96PC3 154 aa6.41□□□□□ -1.38
NPLOC4-212ENST00000573328 TMEM70Q9BUB7 260 aa6.41□□□□□ -1.38
NPLOC4-212ENST00000573328 CHCHD7Q9BUK0 85 aa6.41□□□□□ -1.38
NPLOC4-212ENST00000573328 FAM229AH3BQW9 127 aa6.4□□□□□ -1.38
NPLOC4-212ENST00000573328 MGPP08493 103 aa6.4□□□□□ -1.38
NPLOC4-212ENST00000573328 GNG4P50150 75 aa6.4□□□□□ -1.38
NPLOC4-212ENST00000573328 CCL20P78556 96 aa6.4□□□□□ -1.38
NPLOC4-212ENST00000573328 OR10G8Q8NGN5 311 aa6.4□□□□□ -1.38
NPLOC4-212ENST00000573328 BAALCQ8WXS3 180 aa6.4□□□□□ -1.38
NPLOC4-212ENST00000573328 C11orf52Q96A22 123 aa6.4□□□□□ -1.38
NPLOC4-212ENST00000573328 TRBV6-8A0A0A6YYG3 113 aa6.39□□□□□ -1.39
NPLOC4-212ENST00000573328 RBFOX3A6NFN3 312 aa6.39□□□□□ -1.39
NPLOC4-212ENST00000573328 GZMBP10144 247 aa6.39□□□□□ -1.39
NPLOC4-212ENST00000573328 SULT1A2P50226 295 aa6.39□□□□□ -1.39
NPLOC4-212ENST00000573328 MEF2BQ02080 365 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms