RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 IGHV3-30P01768 117 aa20.41■□□□□ 0.86
CTDNEP1-206ENST00000571409 IGHV3-33P01772 117 aa20.41■□□□□ 0.86
CTDNEP1-206ENST00000571409 IGHV3-30-3P0DP02 117 aa20.41■□□□□ 0.86
CTDNEP1-206ENST00000571409 IGHV3-30-5P0DP03 117 aa20.41■□□□□ 0.86
CTDNEP1-206ENST00000571409 SFRP2Q96HF1 295 aa20.41■□□□□ 0.86
CTDNEP1-206ENST00000571409 IBA57-AS1B1ANH7 110 aa20.4■□□□□ 0.86
CTDNEP1-206ENST00000571409 BAGE2Q86Y30 109 aa20.4■□□□□ 0.86
CTDNEP1-206ENST00000571409 A0A087WWL8 130 aa20.39■□□□□ 0.85
CTDNEP1-206ENST00000571409 CDPF1Q6NVV7 123 aa20.39■□□□□ 0.85
CTDNEP1-206ENST00000571409 ZFP82Q8N141 532 aa20.39■□□□□ 0.85
CTDNEP1-206ENST00000571409 MLST8Q9BVC4 326 aa20.39■□□□□ 0.85
CTDNEP1-206ENST00000571409 RPL19P84098 196 aaKnown RBP20.38■□□□□ 0.85
CTDNEP1-206ENST00000571409 PSCAO43653 123 aa20.37■□□□□ 0.85
CTDNEP1-206ENST00000571409 Q9HAA7 133 aa20.37■□□□□ 0.85
CTDNEP1-206ENST00000571409 APOBP04114 4563 aaKnown RBP20.36■□□□□ 0.85
CTDNEP1-206ENST00000571409 CCL20P78556 96 aa20.36■□□□□ 0.85
CTDNEP1-206ENST00000571409 MANBALQ9NQG1 85 aa20.36■□□□□ 0.85
CTDNEP1-206ENST00000571409 GNG13Q9P2W3 67 aa20.36■□□□□ 0.85
CTDNEP1-206ENST00000571409 ABCA13Q86UQ4 5058 aa20.35■□□□□ 0.85
CTDNEP1-206ENST00000571409 RAB5CP51148 216 aa20.34■□□□□ 0.85
CTDNEP1-206ENST00000571409 EIF5AL1Q6IS14 154 aaKnown RBP20.34■□□□□ 0.85
CTDNEP1-206ENST00000571409 PRR27Q6MZM9 219 aa20.34■□□□□ 0.85
CTDNEP1-206ENST00000571409 TRAV1-1A0A0B4J248 108 aa20.33■□□□□ 0.85
CTDNEP1-206ENST00000571409 RPL35P42766 123 aaKnown RBP20.33■□□□□ 0.85
CTDNEP1-206ENST00000571409 TCTE3Q8IZS6 198 aa20.33■□□□□ 0.85
CTDNEP1-206ENST00000571409 Q8N3U1 123 aa20.33■□□□□ 0.85
CTDNEP1-206ENST00000571409 CXCL1P09341 107 aa20.32■□□□□ 0.84
CTDNEP1-206ENST00000571409 A0A087WWC5 75 aa20.31■□□□□ 0.84
CTDNEP1-206ENST00000571409 Q8N1X5 172 aa20.31■□□□□ 0.84
CTDNEP1-206ENST00000571409 DERL1Q9BUN8 251 aa20.31■□□□□ 0.84
CTDNEP1-206ENST00000571409 SULT1A2P50226 295 aa20.3■□□□□ 0.84
CTDNEP1-206ENST00000571409 LAGE3Q14657 143 aa20.3■□□□□ 0.84
CTDNEP1-206ENST00000571409 OR10AG1Q8NH19 301 aa20.3■□□□□ 0.84
CTDNEP1-206ENST00000571409 C11orf52Q96A22 123 aa20.3■□□□□ 0.84
CTDNEP1-206ENST00000571409 LRCOL1A6NCL2 159 aa20.29■□□□□ 0.84
CTDNEP1-206ENST00000571409 TEX46H3BTG2 121 aa20.29■□□□□ 0.84
CTDNEP1-206ENST00000571409 TRBV10-1A0A0K0K1A3 114 aa20.27■□□□□ 0.84
CTDNEP1-206ENST00000571409 SNAI2O43623 268 aa20.27■□□□□ 0.84
CTDNEP1-206ENST00000571409 DAZ4Q86SG3 579 aaKnown RBP20.26■□□□□ 0.83
CTDNEP1-206ENST00000571409 SSBP4Q9BWG4 385 aaPredicted RBP20.26■□□□□ 0.83
CTDNEP1-206ENST00000571409 DAZ3Q9NR90 486 aaKnown RBP20.26■□□□□ 0.83
CTDNEP1-206ENST00000571409 MUC21A0A0G2JKD1 596 aa20.25■□□□□ 0.83
CTDNEP1-206ENST00000571409 MUC21A0A140T8X8 626 aa20.25■□□□□ 0.83
CTDNEP1-206ENST00000571409 C1QBP02746 253 aa20.25■□□□□ 0.83
CTDNEP1-206ENST00000571409 OR5AL1P0C617 328 aa20.25■□□□□ 0.83
CTDNEP1-206ENST00000571409 KRTAP10-1P60331 282 aa20.25■□□□□ 0.83
CTDNEP1-206ENST00000571409 RPL36AP83881 106 aaKnown RBP20.25■□□□□ 0.83
CTDNEP1-206ENST00000571409 CENPWQ5EE01 88 aa20.25■□□□□ 0.83
CTDNEP1-206ENST00000571409 RPL36ALQ969Q0 106 aaKnown RBP20.25■□□□□ 0.83
CTDNEP1-206ENST00000571409 ZNF56Q15929 161 aa20.24■□□□□ 0.83
CTDNEP1-206ENST00000571409 SPANXN1Q5VSR9 72 aa20.24■□□□□ 0.83
CTDNEP1-206ENST00000571409 SLC51BQ86UW2 128 aa20.24■□□□□ 0.83
CTDNEP1-206ENST00000571409 RAB4BP61018 213 aa20.23■□□□□ 0.83
CTDNEP1-206ENST00000571409 TM2D2Q9BX73 214 aa20.23■□□□□ 0.83
CTDNEP1-206ENST00000571409 TRBV7-3A0A075B6L6 115 aa20.22■□□□□ 0.83
CTDNEP1-206ENST00000571409 GCSHP23434 173 aa20.22■□□□□ 0.83
CTDNEP1-206ENST00000571409 UBE2D3P61077 147 aa20.22■□□□□ 0.83
CTDNEP1-206ENST00000571409 UBE2D2P62837 147 aa20.22■□□□□ 0.83
CTDNEP1-206ENST00000571409 Q6ZNX1 250 aa20.22■□□□□ 0.83
CTDNEP1-206ENST00000571409 TRAV8-3A0A0A6YYJ7 113 aa20.21■□□□□ 0.83
CTDNEP1-206ENST00000571409 SSTP61278 116 aa20.21■□□□□ 0.83
CTDNEP1-206ENST00000571409 MEF2BQ02080 365 aaPredicted RBP20.21■□□□□ 0.83
CTDNEP1-206ENST00000571409 TOR2AQ5JU69 321 aa20.21■□□□□ 0.83
CTDNEP1-206ENST00000571409 NIT1Q86X76 327 aa20.21■□□□□ 0.83
CTDNEP1-206ENST00000571409 URGCP-MRPS24S4R325 110 aa20.21■□□□□ 0.83
CTDNEP1-206ENST00000571409 IGLV5-52A0A0A0MRZ9 124 aa20.2■□□□□ 0.82
CTDNEP1-206ENST00000571409 IFNA1P01562 189 aa20.2■□□□□ 0.82
CTDNEP1-206ENST00000571409 IGLV2-8P01709 118 aa20.2■□□□□ 0.82
CTDNEP1-206ENST00000571409 XGP55808 180 aa20.2■□□□□ 0.82
CTDNEP1-206ENST00000571409 Q8N814 137 aa20.2■□□□□ 0.82
CTDNEP1-206ENST00000571409 OR10G8Q8NGN5 311 aa20.2■□□□□ 0.82
CTDNEP1-206ENST00000571409 NTN5Q8WTR8 489 aaPredicted RBP20.2■□□□□ 0.82
CTDNEP1-206ENST00000571409 RAB19A4D1S5 217 aa20.19■□□□□ 0.82
CTDNEP1-206ENST00000571409 PDE6DO43924 150 aa20.19■□□□□ 0.82
CTDNEP1-206ENST00000571409 GNG4P50150 75 aa20.18■□□□□ 0.82
CTDNEP1-206ENST00000571409 NEXN-AS1Q8NBZ9 246 aa20.18■□□□□ 0.82
CTDNEP1-206ENST00000571409 DAZAP1Q96EP5 407 aaKnown RBP20.18■□□□□ 0.82
CTDNEP1-206ENST00000571409 BCL2P10415 239 aa20.17■□□□□ 0.82
CTDNEP1-206ENST00000571409 GZMBP10144 247 aa20.16■□□□□ 0.82
CTDNEP1-206ENST00000571409 SMIM12Q96EX1 92 aa20.16■□□□□ 0.82
CTDNEP1-206ENST00000571409 MED9Q9NWA0 146 aa20.16■□□□□ 0.82
CTDNEP1-206ENST00000571409 C19orf71A6NCJ1 209 aa20.15■□□□□ 0.82
CTDNEP1-206ENST00000571409 F5H697 171 aa20.15■□□□□ 0.82
CTDNEP1-206ENST00000571409 OR2D3Q8NGH3 330 aa20.15■□□□□ 0.82
CTDNEP1-206ENST00000571409 AP1S3Q96PC3 154 aa20.15■□□□□ 0.82
CTDNEP1-206ENST00000571409 TPPP3Q9BW30 176 aa20.15■□□□□ 0.82
CTDNEP1-206ENST00000571409 SMIM17P0DL12 118 aa20.14■□□□□ 0.81
CTDNEP1-206ENST00000571409 RPS20P60866 119 aaKnown RBP20.14■□□□□ 0.81
CTDNEP1-206ENST00000571409 WFDC2Q14508 124 aa20.14■□□□□ 0.81
CTDNEP1-206ENST00000571409 AKAP14Q86UN6 197 aa20.14■□□□□ 0.81
CTDNEP1-206ENST00000571409 VAX2Q9UIW0 290 aa20.14■□□□□ 0.81
CTDNEP1-206ENST00000571409 KLK12Q9UKR0 248 aa20.14■□□□□ 0.81
CTDNEP1-206ENST00000571409 TRBV20OR9-2A0A075B6H5 130 aa20.13■□□□□ 0.81
CTDNEP1-206ENST00000571409 A0A087WX48 190 aa20.13■□□□□ 0.81
CTDNEP1-206ENST00000571409 RBFOX3A6NFN3 312 aa20.13■□□□□ 0.81
CTDNEP1-206ENST00000571409 IGLC6P0CF74 106 aa20.13■□□□□ 0.81
CTDNEP1-206ENST00000571409 FER1L6-AS1Q8NA97 138 aa20.13■□□□□ 0.81
CTDNEP1-206ENST00000571409 CHCHD7Q9BUK0 85 aa20.13■□□□□ 0.81
CTDNEP1-206ENST00000571409 KIF25-AS1Q9Y6Z4 181 aa20.13■□□□□ 0.81
CTDNEP1-206ENST00000571409 hCG_2014768A0A024R1R8 64 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms