RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 GAGE13Q4V321 117 aa11.42□□□□□ -0.58
MAP1LC3B-208ENST00000570189 ZFP82Q8N141 532 aa11.42□□□□□ -0.58
MAP1LC3B-208ENST00000570189 C14orf178Q8N769 122 aaPredicted RBP11.42□□□□□ -0.58
MAP1LC3B-208ENST00000570189 TRAV1-1A0A0B4J248 108 aa11.41□□□□□ -0.58
MAP1LC3B-208ENST00000570189 GRIFINA4D1Z8 144 aa11.41□□□□□ -0.58
MAP1LC3B-208ENST00000570189 PSCAO43653 123 aa11.41□□□□□ -0.58
MAP1LC3B-208ENST00000570189 PFDN1O60925 122 aa11.41□□□□□ -0.58
MAP1LC3B-208ENST00000570189 H2AFB1P0C5Y9 115 aa11.41□□□□□ -0.58
MAP1LC3B-208ENST00000570189 XGP55808 180 aa11.41□□□□□ -0.58
MAP1LC3B-208ENST00000570189 Q9UF83 564 aa11.41□□□□□ -0.58
MAP1LC3B-208ENST00000570189 SCO2A0A1W2PP80 73 aa11.4□□□□□ -0.58
MAP1LC3B-208ENST00000570189 IGHV3-30P01768 117 aa11.4□□□□□ -0.58
MAP1LC3B-208ENST00000570189 IGHV3-33P01772 117 aa11.4□□□□□ -0.58
MAP1LC3B-208ENST00000570189 IGHV3-30-3P0DP02 117 aa11.4□□□□□ -0.58
MAP1LC3B-208ENST00000570189 IGHV3-30-5P0DP03 117 aa11.4□□□□□ -0.58
MAP1LC3B-208ENST00000570189 KRTAP10-1P60331 282 aa11.4□□□□□ -0.58
MAP1LC3B-208ENST00000570189 SSBP4Q9BWG4 385 aaPredicted RBP11.4□□□□□ -0.58
MAP1LC3B-208ENST00000570189 TM2D2Q9BX73 214 aa11.4□□□□□ -0.58
MAP1LC3B-208ENST00000570189 TRAV8-3A0A0A6YYJ7 113 aa11.39□□□□□ -0.59
MAP1LC3B-208ENST00000570189 SNAI2O43623 268 aa11.39□□□□□ -0.59
MAP1LC3B-208ENST00000570189 GCSHP23434 173 aa11.39□□□□□ -0.59
MAP1LC3B-208ENST00000570189 RAB5CP51148 216 aa11.39□□□□□ -0.59
MAP1LC3B-208ENST00000570189 TOR2AQ5JU69 321 aa11.39□□□□□ -0.59
MAP1LC3B-208ENST00000570189 TMUB2Q71RG4 321 aa11.39□□□□□ -0.59
MAP1LC3B-208ENST00000570189 OR10G8Q8NGN5 311 aa11.39□□□□□ -0.59
MAP1LC3B-208ENST00000570189 C11orf52Q96A22 123 aa11.39□□□□□ -0.59
MAP1LC3B-208ENST00000570189 CHCHD7Q9BUK0 85 aa11.39□□□□□ -0.59
MAP1LC3B-208ENST00000570189 M0R381 172 aa11.38□□□□□ -0.59
MAP1LC3B-208ENST00000570189 OR5AL1P0C617 328 aa11.38□□□□□ -0.59
MAP1LC3B-208ENST00000570189 FUSP35637 526 aaKnown RBP eCLIP11.38□□□□□ -0.59
MAP1LC3B-208ENST00000570189 FAM74A4Q5TZK3 123 aa11.38□□□□□ -0.59
MAP1LC3B-208ENST00000570189 BAGE2Q86Y30 109 aa11.38□□□□□ -0.59
MAP1LC3B-208ENST00000570189 Q8N814 137 aa11.38□□□□□ -0.59
MAP1LC3B-208ENST00000570189 MANBALQ9NQG1 85 aa11.38□□□□□ -0.59
MAP1LC3B-208ENST00000570189 A0A087WWL8 130 aa11.37□□□□□ -0.59
MAP1LC3B-208ENST00000570189 TMSB15BA0A087X1C1 80 aa11.37□□□□□ -0.59
MAP1LC3B-208ENST00000570189 TMEM70Q9BUB7 260 aa11.37□□□□□ -0.59
MAP1LC3B-208ENST00000570189 Q9HAA7 133 aa11.37□□□□□ -0.59
MAP1LC3B-208ENST00000570189 COX11Q9Y6N1 276 aa11.37□□□□□ -0.59
MAP1LC3B-208ENST00000570189 VPS13BQ7Z7G8 4022 aa11.37□□□□□ -0.59
MAP1LC3B-208ENST00000570189 RAB4BP61018 213 aa11.36□□□□□ -0.59
MAP1LC3B-208ENST00000570189 UBE2D3P61077 147 aa11.36□□□□□ -0.59
MAP1LC3B-208ENST00000570189 UBE2D2P62837 147 aa11.36□□□□□ -0.59
MAP1LC3B-208ENST00000570189 EIF5AL1Q6IS14 154 aaKnown RBP11.36□□□□□ -0.59
MAP1LC3B-208ENST00000570189 PRR27Q6MZM9 219 aa11.36□□□□□ -0.59
MAP1LC3B-208ENST00000570189 NIT1Q86X76 327 aa11.36□□□□□ -0.59
MAP1LC3B-208ENST00000570189 Q8N3U1 123 aa11.36□□□□□ -0.59
MAP1LC3B-208ENST00000570189 TRBV7-3A0A075B6L6 115 aa11.35□□□□□ -0.59
MAP1LC3B-208ENST00000570189 IGLV5-52A0A0A0MRZ9 124 aa11.35□□□□□ -0.59
MAP1LC3B-208ENST00000570189 C1QBP02746 253 aa11.35□□□□□ -0.59
MAP1LC3B-208ENST00000570189 RPL35P42766 123 aaKnown RBP11.35□□□□□ -0.59
MAP1LC3B-208ENST00000570189 RPL36AP83881 106 aaKnown RBP11.35□□□□□ -0.59
MAP1LC3B-208ENST00000570189 RPL36ALQ969Q0 106 aaKnown RBP11.35□□□□□ -0.59
MAP1LC3B-208ENST00000570189 SMIM12Q96EX1 92 aa11.35□□□□□ -0.59
MAP1LC3B-208ENST00000570189 A0A1B0GV50 99 aa11.34□□□□□ -0.59
MAP1LC3B-208ENST00000570189 EPM2AB3EWF7 344 aa11.34□□□□□ -0.59
MAP1LC3B-208ENST00000570189 RPL19P84098 196 aaKnown RBP11.34□□□□□ -0.59
MAP1LC3B-208ENST00000570189 DAZ4Q86SG3 579 aaKnown RBP11.34□□□□□ -0.59
MAP1LC3B-208ENST00000570189 TCTE3Q8IZS6 198 aa11.34□□□□□ -0.59
MAP1LC3B-208ENST00000570189 OR10AG1Q8NH19 301 aa11.34□□□□□ -0.59
MAP1LC3B-208ENST00000570189 DAZ3Q9NR90 486 aaKnown RBP11.34□□□□□ -0.59
MAP1LC3B-208ENST00000570189 TEX46H3BTG2 121 aa11.33□□□□□ -0.6
MAP1LC3B-208ENST00000570189 SULT1A2P50226 295 aa11.33□□□□□ -0.6
MAP1LC3B-208ENST00000570189 FAT1Q14517 4588 aa11.32□□□□□ -0.6
MAP1LC3B-208ENST00000570189 CCL20P78556 96 aa11.32□□□□□ -0.6
MAP1LC3B-208ENST00000570189 ATRAIDQ6UW56 229 aa11.32□□□□□ -0.6
MAP1LC3B-208ENST00000570189 RMI2Q96E14 147 aa11.32□□□□□ -0.6
MAP1LC3B-208ENST00000570189 URGCP-MRPS24S4R325 110 aa11.32□□□□□ -0.6
MAP1LC3B-208ENST00000570189 DNAH8Q96JB1 4490 aa11.32□□□□□ -0.6
MAP1LC3B-208ENST00000570189 IGLV2-8P01709 118 aa11.31□□□□□ -0.6
MAP1LC3B-208ENST00000570189 ELOBQ15370 118 aa11.31□□□□□ -0.6
MAP1LC3B-208ENST00000570189 DERL1Q9BUN8 251 aa11.31□□□□□ -0.6
MAP1LC3B-208ENST00000570189 GNG13Q9P2W3 67 aa11.31□□□□□ -0.6
MAP1LC3B-208ENST00000570189 KIF25-AS1Q9Y6Z4 181 aa11.31□□□□□ -0.6
MAP1LC3B-208ENST00000570189 WFDC2Q14508 124 aa11.3□□□□□ -0.6
MAP1LC3B-208ENST00000570189 NEXN-AS1Q8NBZ9 246 aa11.3□□□□□ -0.6
MAP1LC3B-208ENST00000570189 VAX2Q9UIW0 290 aa11.3□□□□□ -0.6
MAP1LC3B-208ENST00000570189 TRBV6-8A0A0A6YYG3 113 aa11.29□□□□□ -0.6
MAP1LC3B-208ENST00000570189 C19orf71A6NCJ1 209 aa11.29□□□□□ -0.6
MAP1LC3B-208ENST00000570189 PDE6DO43924 150 aa11.29□□□□□ -0.6
MAP1LC3B-208ENST00000570189 IGLC6P0CF74 106 aa11.29□□□□□ -0.6
MAP1LC3B-208ENST00000570189 MEF2BQ02080 365 aaPredicted RBP11.29□□□□□ -0.6
MAP1LC3B-208ENST00000570189 ZNF56Q15929 161 aa11.29□□□□□ -0.6
MAP1LC3B-208ENST00000570189 CENPWQ5EE01 88 aa11.29□□□□□ -0.6
MAP1LC3B-208ENST00000570189 Q5VSD8 79 aa11.29□□□□□ -0.6
MAP1LC3B-208ENST00000570189 SPANXN1Q5VSR9 72 aa11.29□□□□□ -0.6
MAP1LC3B-208ENST00000570189 FRZBQ92765 325 aa11.29□□□□□ -0.6
MAP1LC3B-208ENST00000570189 A0A087WX48 190 aa11.28□□□□□ -0.6
MAP1LC3B-208ENST00000570189 RPS20P60866 119 aaKnown RBP11.28□□□□□ -0.6
MAP1LC3B-208ENST00000570189 PKIAP61925 76 aa11.28□□□□□ -0.6
MAP1LC3B-208ENST00000570189 Q0VG73 95 aa11.28□□□□□ -0.6
MAP1LC3B-208ENST00000570189 TMEM97Q5BJF2 176 aa11.28□□□□□ -0.6
MAP1LC3B-208ENST00000570189 Q6ZSA8 131 aa11.28□□□□□ -0.6
MAP1LC3B-208ENST00000570189 SLC51BQ86UW2 128 aa11.28□□□□□ -0.6
MAP1LC3B-208ENST00000570189 AP1S3Q96PC3 154 aa11.28□□□□□ -0.6
MAP1LC3B-208ENST00000570189 IFNA1P01562 189 aa11.27□□□□□ -0.61
MAP1LC3B-208ENST00000570189 TAGLN2P37802 199 aaKnown RBP11.27□□□□□ -0.61
MAP1LC3B-208ENST00000570189 RBFOX3A6NFN3 312 aa11.26□□□□□ -0.61
MAP1LC3B-208ENST00000570189 BCL2P10415 239 aa11.26□□□□□ -0.61
MAP1LC3B-208ENST00000570189 KCNIP4Q6PIL6 250 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms