RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 TEX261Q6UWH6 196 aa6.69□□□□□ -1.34
GTF3C1-212ENST00000570129 OR2D3Q8NGH3 330 aa6.69□□□□□ -1.34
GTF3C1-212ENST00000570129 SFRP2Q96HF1 295 aa6.69□□□□□ -1.34
GTF3C1-212ENST00000570129 PHLDA3Q9Y5J5 127 aa6.69□□□□□ -1.34
GTF3C1-212ENST00000570129 IFNA1P01562 189 aa6.68□□□□□ -1.34
GTF3C1-212ENST00000570129 FOXA3P55318 350 aaPredicted RBP6.68□□□□□ -1.34
GTF3C1-212ENST00000570129 LINC00315P59091 139 aa6.68□□□□□ -1.34
GTF3C1-212ENST00000570129 TNP2Q05952 138 aa6.68□□□□□ -1.34
GTF3C1-212ENST00000570129 NEGR1Q7Z3B1 354 aa6.68□□□□□ -1.34
GTF3C1-212ENST00000570129 DEFB104AQ8WTQ1 72 aa6.68□□□□□ -1.34
GTF3C1-212ENST00000570129 ANAPC16Q96DE5 110 aa6.68□□□□□ -1.34
GTF3C1-212ENST00000570129 TPPP3Q9BW30 176 aa6.68□□□□□ -1.34
GTF3C1-212ENST00000570129 SSBP4Q9BWG4 385 aaPredicted RBP6.68□□□□□ -1.34
GTF3C1-212ENST00000570129 SNAI2O43623 268 aa6.67□□□□□ -1.34
GTF3C1-212ENST00000570129 IGLC6P0CF74 106 aa6.67□□□□□ -1.34
GTF3C1-212ENST00000570129 SRIP30626 198 aa6.67□□□□□ -1.34
GTF3C1-212ENST00000570129 LYZL1Q6UWQ5 148 aa6.67□□□□□ -1.34
GTF3C1-212ENST00000570129 FAM210AQ96ND0 272 aa6.67□□□□□ -1.34
GTF3C1-212ENST00000570129 EIF5A2Q9GZV4 153 aaKnown RBP6.67□□□□□ -1.34
GTF3C1-212ENST00000570129 KIF25-AS1Q9Y6Z4 181 aa6.67□□□□□ -1.34
GTF3C1-212ENST00000570129 TMEM238LA0A1B0GVL6 79 aa6.66□□□□□ -1.34
GTF3C1-212ENST00000570129 TRBV6-4A0A1B0GX49 114 aa6.66□□□□□ -1.34
GTF3C1-212ENST00000570129 PRSS29PA6NIE9 313 aa6.66□□□□□ -1.34
GTF3C1-212ENST00000570129 LINC00694P0DN24 101 aa6.66□□□□□ -1.34
GTF3C1-212ENST00000570129 IFITM2Q01629 132 aa6.66□□□□□ -1.34
GTF3C1-212ENST00000570129 SLAQ13239 276 aa6.66□□□□□ -1.34
GTF3C1-212ENST00000570129 C1orf134Q5TEV5 83 aa6.66□□□□□ -1.34
GTF3C1-212ENST00000570129 GTSF1Q8WW33 167 aa6.66□□□□□ -1.34
GTF3C1-212ENST00000570129 DNAJC30Q96LL9 226 aa6.66□□□□□ -1.34
GTF3C1-212ENST00000570129 TXNDC17Q9BRA2 123 aa6.66□□□□□ -1.34
GTF3C1-212ENST00000570129 UPK3BQ9BT76 320 aa6.66□□□□□ -1.34
GTF3C1-212ENST00000570129 IGHV3-38A0A0C4DH36 116 aa6.65□□□□□ -1.34
GTF3C1-212ENST00000570129 A8MWV9 139 aa6.65□□□□□ -1.34
GTF3C1-212ENST00000570129 SIVA1O15304 175 aa6.65□□□□□ -1.34
GTF3C1-212ENST00000570129 FAM3BP58499 235 aaPredicted RBP6.65□□□□□ -1.34
GTF3C1-212ENST00000570129 ZFP2Q6ZN57 461 aa6.65□□□□□ -1.34
GTF3C1-212ENST00000570129 ZFP82Q8N141 532 aa6.65□□□□□ -1.34
GTF3C1-212ENST00000570129 KRTAP17-1Q9BYP8 105 aa6.65□□□□□ -1.34
GTF3C1-212ENST00000570129 PKHD1P08F94 4074 aa6.65□□□□□ -1.35
GTF3C1-212ENST00000570129 P01737 135 aa6.64□□□□□ -1.35
GTF3C1-212ENST00000570129 OR5AL1P0C617 328 aa6.64□□□□□ -1.35
GTF3C1-212ENST00000570129 SPANXN1Q5VSR9 72 aa6.64□□□□□ -1.35
GTF3C1-212ENST00000570129 C6orf223Q8N319 242 aa6.64□□□□□ -1.35
GTF3C1-212ENST00000570129 FER1L6-AS1Q8NA97 138 aa6.64□□□□□ -1.35
GTF3C1-212ENST00000570129 SYT8Q8NBV8 401 aa6.64□□□□□ -1.35
GTF3C1-212ENST00000570129 ATP6V0E2Q8NHE4 81 aa6.64□□□□□ -1.35
GTF3C1-212ENST00000570129 DAZAP1Q96EP5 407 aaKnown RBP6.64□□□□□ -1.35
GTF3C1-212ENST00000570129 PRADC1Q9BSG0 188 aa6.64□□□□□ -1.35
GTF3C1-212ENST00000570129 DYNC1H1Q14204 4646 aaKnown RBP6.64□□□□□ -1.35
GTF3C1-212ENST00000570129 TMEM250H0YL14 139 aa6.63□□□□□ -1.35
GTF3C1-212ENST00000570129 GAS8-AS1O95177 125 aa6.63□□□□□ -1.35
GTF3C1-212ENST00000570129 IGHV3-30P01768 117 aa6.63□□□□□ -1.35
GTF3C1-212ENST00000570129 IGHV3-33P01772 117 aa6.63□□□□□ -1.35
GTF3C1-212ENST00000570129 CXCL1P09341 107 aa6.63□□□□□ -1.35
GTF3C1-212ENST00000570129 IGHV3-30-3P0DP02 117 aa6.63□□□□□ -1.35
GTF3C1-212ENST00000570129 IGHV3-30-5P0DP03 117 aa6.63□□□□□ -1.35
GTF3C1-212ENST00000570129 MED14OSP0DP75 135 aa6.63□□□□□ -1.35
GTF3C1-212ENST00000570129 NTF3P20783 257 aa6.63□□□□□ -1.35
GTF3C1-212ENST00000570129 EVI2AP22794 236 aa6.63□□□□□ -1.35
GTF3C1-212ENST00000570129 RHOHQ15669 191 aa6.63□□□□□ -1.35
GTF3C1-212ENST00000570129 PIK3CD-AS1Q5SR53 167 aa6.63□□□□□ -1.35
GTF3C1-212ENST00000570129 Q6ZRN7 208 aaPredicted RBP6.63□□□□□ -1.35
GTF3C1-212ENST00000570129 LINC01551Q86U37 167 aa6.63□□□□□ -1.35
GTF3C1-212ENST00000570129 NEXN-AS1Q8NBZ9 246 aa6.63□□□□□ -1.35
GTF3C1-212ENST00000570129 SMIM7Q9BQ49 75 aa6.63□□□□□ -1.35
GTF3C1-212ENST00000570129 RPP21Q9H633 154 aaKnown RBP6.63□□□□□ -1.35
GTF3C1-212ENST00000570129 ZNF727A8MUV8 499 aa6.62□□□□□ -1.35
GTF3C1-212ENST00000570129 TAGLN2P37802 199 aaKnown RBP6.62□□□□□ -1.35
GTF3C1-212ENST00000570129 PGLYRP4Q96LB8 373 aa6.62□□□□□ -1.35
GTF3C1-212ENST00000570129 TRAV26-2A0A0B4J265 109 aa6.61□□□□□ -1.35
GTF3C1-212ENST00000570129 F5H697 171 aa6.61□□□□□ -1.35
GTF3C1-212ENST00000570129 GATCO43716 136 aaKnown RBP6.61□□□□□ -1.35
GTF3C1-212ENST00000570129 MGPP08493 103 aa6.61□□□□□ -1.35
GTF3C1-212ENST00000570129 KRTAP10-2P60368 255 aa6.61□□□□□ -1.35
GTF3C1-212ENST00000570129 UBE2D3P61077 147 aa6.61□□□□□ -1.35
GTF3C1-212ENST00000570129 RPL23P62829 140 aaKnown RBP6.61□□□□□ -1.35
GTF3C1-212ENST00000570129 UBE2D2P62837 147 aa6.61□□□□□ -1.35
GTF3C1-212ENST00000570129 ZNF56Q15929 161 aa6.61□□□□□ -1.35
GTF3C1-212ENST00000570129 SUMO4Q6EEV6 95 aa6.61□□□□□ -1.35
GTF3C1-212ENST00000570129 NTM-AS1Q6ZSK4 140 aa6.61□□□□□ -1.35
GTF3C1-212ENST00000570129 GTSF1LQ9H1H1 148 aa6.61□□□□□ -1.35
GTF3C1-212ENST00000570129 M0QY20 66 aa6.6□□□□□ -1.35
GTF3C1-212ENST00000570129 DNAH10OSP0CZ25 163 aa6.6□□□□□ -1.35
GTF3C1-212ENST00000570129 CTRLP40313 264 aa6.6□□□□□ -1.35
GTF3C1-212ENST00000570129 ERVFC1-1P60608 527 aa6.6□□□□□ -1.35
GTF3C1-212ENST00000570129 RPS20P60866 119 aaKnown RBP6.6□□□□□ -1.35
GTF3C1-212ENST00000570129 OR10J3Q5JRS4 329 aa6.6□□□□□ -1.35
GTF3C1-212ENST00000570129 DAZ4Q86SG3 579 aaKnown RBP6.6□□□□□ -1.35
GTF3C1-212ENST00000570129 SMIM12Q96EX1 92 aa6.6□□□□□ -1.35
GTF3C1-212ENST00000570129 DAZ3Q9NR90 486 aaKnown RBP6.6□□□□□ -1.35
GTF3C1-212ENST00000570129 KIAA1109Q2LD37 5005 aa6.59□□□□□ -1.35
GTF3C1-212ENST00000570129 RHODO00212 210 aa6.59□□□□□ -1.35
GTF3C1-212ENST00000570129 CIDEAO60543 219 aa6.59□□□□□ -1.35
GTF3C1-212ENST00000570129 TIRAPP58753 221 aa6.59□□□□□ -1.35
GTF3C1-212ENST00000570129 RAB4BP61018 213 aa6.59□□□□□ -1.35
GTF3C1-212ENST00000570129 TWIST1Q15672 202 aa6.59□□□□□ -1.35
GTF3C1-212ENST00000570129 TMEM241Q24JQ0 296 aa6.59□□□□□ -1.35
GTF3C1-212ENST00000570129 LELP1Q5T871 98 aa6.59□□□□□ -1.35
GTF3C1-212ENST00000570129 LINC00336Q6ZUF6 198 aa6.59□□□□□ -1.35
GTF3C1-212ENST00000570129 ISOC2Q96AB3 205 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 166.9 ms