RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	TRAV7	A0A075B6U4	112 aa		3.31	□□□□□ -1.88
MACF1-231	ENST00000564288	MBD3L4	A6NDZ8	208 aa	Predicted RBP	3.31	□□□□□ -1.88
MACF1-231	ENST00000564288	MBD3L3	A6NE82	208 aa	Predicted RBP	3.31	□□□□□ -1.88
MACF1-231	ENST00000564288	MBD3L5	A6NJ08	208 aa	Predicted RBP	3.31	□□□□□ -1.88
MACF1-231	ENST00000564288	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	3.31	□□□□□ -1.88
MACF1-231	ENST00000564288	TRBV7-3	A0A075B6L6	115 aa		3.31	□□□□□ -1.88
MACF1-231	ENST00000564288	IGHV1-3	A0A0C4DH29	117 aa		3.31	□□□□□ -1.88
MACF1-231	ENST00000564288	IGHV1-58	A0A0C4DH39	117 aa		3.31	□□□□□ -1.88
MACF1-231	ENST00000564288		J3QLI3	93 aa		3.31	□□□□□ -1.88
MACF1-231	ENST00000564288	OPRPN	Q99935	248 aa	Predicted RBP	3.31	□□□□□ -1.88
MACF1-231	ENST00000564288	C9orf47	Q6ZRZ4	202 aa		3.31	□□□□□ -1.88
MACF1-231	ENST00000564288	DEFB121	Q5J5C9	76 aa		3.31	□□□□□ -1.88
MACF1-231	ENST00000564288	TMEM178B	H3BS89	294 aa		3.31	□□□□□ -1.88
MACF1-231	ENST00000564288	BRI3	O95415	125 aa		3.31	□□□□□ -1.88
MACF1-231	ENST00000564288	CLEC19A	Q6UXS0	136 aa		3.31	□□□□□ -1.88
MACF1-231	ENST00000564288		H3BRN7	92 aa		3.31	□□□□□ -1.88
MACF1-231	ENST00000564288	PSMB8	P28062	276 aa		3.31	□□□□□ -1.88
MACF1-231	ENST00000564288	BRWD1-AS2	P59051	145 aa		3.31	□□□□□ -1.88
MACF1-231	ENST00000564288	DYNAP	Q8N1N2	210 aa		3.31	□□□□□ -1.88
MACF1-231	ENST00000564288	CCDC140	Q96MF4	163 aa		3.31	□□□□□ -1.88
MACF1-231	ENST00000564288	IGHV3-30	P01768	117 aa		3.31	□□□□□ -1.88
MACF1-231	ENST00000564288	IGHV3-30-5	P0DP03	117 aa		3.31	□□□□□ -1.88
MACF1-231	ENST00000564288	BAALC	Q8WXS3	180 aa		3.31	□□□□□ -1.88
MACF1-231	ENST00000564288	C17orf58	Q2M2W7	97 aa		3.31	□□□□□ -1.88
MACF1-231	ENST00000564288	C1orf159	Q96HA4	380 aa		3.31	□□□□□ -1.88
MACF1-231	ENST00000564288	PMAIP1	Q13794	54 aa		3.31	□□□□□ -1.88
MACF1-231	ENST00000564288	NUP210L	Q5VU65	1888 aa		3.31	□□□□□ -1.88
MACF1-231	ENST00000564288	TRAV41	A0A0B4J266	112 aa		3.3	□□□□□ -1.88
MACF1-231	ENST00000564288	BRK1	Q8WUW1	75 aa		3.3	□□□□□ -1.88
MACF1-231	ENST00000564288	ANKRD17	O75179	2603 aa	Known RBP	3.3	□□□□□ -1.88
MACF1-231	ENST00000564288	BUB3	O43684	328 aa		3.3	□□□□□ -1.88
MACF1-231	ENST00000564288	NPB	Q8NG41	125 aa		3.3	□□□□□ -1.88
MACF1-231	ENST00000564288	IGKV1-17	P01599	117 aa		3.3	□□□□□ -1.88
MACF1-231	ENST00000564288	GFRAL	Q6UXV0	394 aa		3.3	□□□□□ -1.88
MACF1-231	ENST00000564288	TRBV10-1	A0A0K0K1A3	114 aa		3.3	□□□□□ -1.88
MACF1-231	ENST00000564288	NDUFA4	O00483	81 aa		3.3	□□□□□ -1.88
MACF1-231	ENST00000564288	COX7A2L	O14548	114 aa		3.3	□□□□□ -1.88
MACF1-231	ENST00000564288	TP53TG1	Q9Y2A0	90 aa		3.3	□□□□□ -1.88
MACF1-231	ENST00000564288	PROP1	O75360	226 aa		3.3	□□□□□ -1.88
MACF1-231	ENST00000564288	TRBV12-3	P01733	135 aa		3.3	□□□□□ -1.88
MACF1-231	ENST00000564288	CD28	P10747	220 aa		3.3	□□□□□ -1.88
MACF1-231	ENST00000564288	FLNB	O75369	2602 aa	Known RBP	3.3	□□□□□ -1.88
MACF1-231	ENST00000564288	MRGPRG-AS1	Q2M3A8	158 aa		3.3	□□□□□ -1.88
MACF1-231	ENST00000564288	HTN1	P15515	57 aa		3.3	□□□□□ -1.88
MACF1-231	ENST00000564288	MAST4	O15021	2626 aa		3.3	□□□□□ -1.88
MACF1-231	ENST00000564288	C5orf38	Q86SI9	138 aa		3.3	□□□□□ -1.88
MACF1-231	ENST00000564288	UBE2E1	P51965	193 aa		3.3	□□□□□ -1.88
MACF1-231	ENST00000564288	IGHV1-8	P0DP01	117 aa		3.3	□□□□□ -1.88
MACF1-231	ENST00000564288	CRYGB	P07316	175 aa		3.3	□□□□□ -1.88
MACF1-231	ENST00000564288	LINC01600	Q96MT4	127 aa		3.3	□□□□□ -1.88
MACF1-231	ENST00000564288	MRPL36	Q9P0J6	103 aa	Known RBP	3.3	□□□□□ -1.88
MACF1-231	ENST00000564288	IGKV3D-7	A0A0C4DH55	119 aa		3.3	□□□□□ -1.88
MACF1-231	ENST00000564288	URB1-AS1	Q96HZ7	61 aa		3.3	□□□□□ -1.88
MACF1-231	ENST00000564288	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	3.3	□□□□□ -1.88
MACF1-231	ENST00000564288	PFN2	P35080	140 aa		3.3	□□□□□ -1.88
MACF1-231	ENST00000564288	TMEM263	Q8WUH6	116 aa	Known RBP	3.3	□□□□□ -1.88
MACF1-231	ENST00000564288	KLK10	O43240	276 aa		3.29	□□□□□ -1.88
MACF1-231	ENST00000564288	LINC01587	Q99440	93 aa		3.29	□□□□□ -1.88
MACF1-231	ENST00000564288	NDUFB1	O75438	58 aa		3.29	□□□□□ -1.88
MACF1-231	ENST00000564288	APELA	P0DMC3	54 aa		3.29	□□□□□ -1.88
MACF1-231	ENST00000564288	RITA1	Q96K30	269 aa		3.29	□□□□□ -1.88
MACF1-231	ENST00000564288	MDS2	Q8NDY4	140 aa		3.29	□□□□□ -1.88
MACF1-231	ENST00000564288	IGKV2D-26	A0A0A0MRZ7	120 aa		3.29	□□□□□ -1.88
MACF1-231	ENST00000564288	DAZ4	Q86SG3	579 aa	Known RBP	3.29	□□□□□ -1.88
MACF1-231	ENST00000564288	CFHR4	Q92496	578 aa		3.29	□□□□□ -1.88
MACF1-231	ENST00000564288	DAZ3	Q9NR90	486 aa	Known RBP	3.29	□□□□□ -1.88
MACF1-231	ENST00000564288	HRCT1	Q6UXD1	115 aa		3.29	□□□□□ -1.88
MACF1-231	ENST00000564288	WISP2	O76076	250 aa		3.29	□□□□□ -1.88
MACF1-231	ENST00000564288	MIA	Q16674	131 aa		3.29	□□□□□ -1.88
MACF1-231	ENST00000564288	SPRY4	Q9C004	299 aa		3.29	□□□□□ -1.88
MACF1-231	ENST00000564288	EML5	Q05BV3	1969 aa		3.29	□□□□□ -1.88
MACF1-231	ENST00000564288	FAM110D	Q8TAY7	271 aa	Predicted RBP	3.29	□□□□□ -1.88
MACF1-231	ENST00000564288	RNASE6	Q93091	150 aa	Known RBP	3.29	□□□□□ -1.88
MACF1-231	ENST00000564288		I3L2K1	104 aa		3.29	□□□□□ -1.88
MACF1-231	ENST00000564288		K7EIM0	57 aa		3.29	□□□□□ -1.88
MACF1-231	ENST00000564288		Q8N7P7	452 aa		3.29	□□□□□ -1.88
MACF1-231	ENST00000564288	IGLV2-11	P01706	119 aa		3.29	□□□□□ -1.88
MACF1-231	ENST00000564288		K7EMT4	169 aa		3.28	□□□□□ -1.88
MACF1-231	ENST00000564288	ELANE	P08246	267 aa		3.28	□□□□□ -1.88
MACF1-231	ENST00000564288	ZNF784	Q8NCA9	323 aa	Predicted RBP	3.28	□□□□□ -1.88
MACF1-231	ENST00000564288	C17orf77	Q96MU5	243 aa		3.28	□□□□□ -1.88
MACF1-231	ENST00000564288		U3KQE9	123 aa		3.28	□□□□□ -1.88
MACF1-231	ENST00000564288	EBI3	Q14213	229 aa		3.28	□□□□□ -1.88
MACF1-231	ENST00000564288	PROK2	Q9HC23	129 aa		3.28	□□□□□ -1.88
MACF1-231	ENST00000564288	COL5A1	P20908	1838 aa	Predicted RBP	3.28	□□□□□ -1.88
MACF1-231	ENST00000564288	NREP	Q16612	68 aa		3.28	□□□□□ -1.88
MACF1-231	ENST00000564288	LST1	O00453	97 aa		3.28	□□□□□ -1.88
MACF1-231	ENST00000564288	NHLRC4	P0CG21	123 aa	Predicted RBP	3.28	□□□□□ -1.88
MACF1-231	ENST00000564288	PRRC2A	P48634	2157 aa	Known RBP	3.28	□□□□□ -1.88
MACF1-231	ENST00000564288	CTSG	P08311	255 aa		3.28	□□□□□ -1.88
MACF1-231	ENST00000564288	GP9	P14770	177 aa		3.28	□□□□□ -1.88
MACF1-231	ENST00000564288	RNF185	Q96GF1	192 aa		3.28	□□□□□ -1.88
MACF1-231	ENST00000564288	C8orf49	Q96NF6	230 aa		3.28	□□□□□ -1.88
MACF1-231	ENST00000564288	LTBP2	Q14767	1821 aa		3.28	□□□□□ -1.88
MACF1-231	ENST00000564288	MRPS12	O15235	138 aa	Known RBP	3.28	□□□□□ -1.88
MACF1-231	ENST00000564288	CRIP3	Q6Q6R5	217 aa		3.28	□□□□□ -1.88
MACF1-231	ENST00000564288	IGIP	A6NJ69	53 aa		3.28	□□□□□ -1.88
MACF1-231	ENST00000564288	IGKV1OR2-108	A0A075B7D4	117 aa		3.28	□□□□□ -1.88
MACF1-231	ENST00000564288	MSRB1	Q9NZV6	116 aa		3.28	□□□□□ -1.88
MACF1-231	ENST00000564288	OBSL1	O75147	1896 aa		3.28	□□□□□ -1.88

Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms