RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 TCL1BO95988 128 aa9.72□□□□□ -0.85
COMMD4-209ENST00000564068 GATD1Q8NB37 220 aa9.72□□□□□ -0.85
COMMD4-209ENST00000564068 SZT2Q5T011 3432 aa9.72□□□□□ -0.85
COMMD4-209ENST00000564068 IGHV3-16A0A0C4DH30 117 aa9.72□□□□□ -0.85
COMMD4-209ENST00000564068 RBAKDNA6NC62 111 aa9.72□□□□□ -0.85
COMMD4-209ENST00000564068 IGHV3-53P01767 116 aa9.72□□□□□ -0.85
COMMD4-209ENST00000564068 AGRNO00468 2067 aa9.72□□□□□ -0.85
COMMD4-209ENST00000564068 HIVEP3Q5T1R4 2406 aa9.72□□□□□ -0.85
COMMD4-209ENST00000564068 DSCAMO60469 2012 aa9.72□□□□□ -0.85
COMMD4-209ENST00000564068 SETD2Q9BYW2 2564 aaPredicted RBP9.71□□□□□ -0.85
COMMD4-209ENST00000564068 TRAV12-1A0A0B4J245 112 aa9.71□□□□□ -0.85
COMMD4-209ENST00000564068 I3L3M4 83 aa9.71□□□□□ -0.85
COMMD4-209ENST00000564068 TRIOO75962 3097 aa9.71□□□□□ -0.86
COMMD4-209ENST00000564068 TRGV2A0A075B6R0 118 aa9.71□□□□□ -0.86
COMMD4-209ENST00000564068 GRNP28799 593 aaKnown RBP9.71□□□□□ -0.86
COMMD4-209ENST00000564068 LINC01620Q4KN68 170 aa9.71□□□□□ -0.86
COMMD4-209ENST00000564068 FAM223BA6NKX1 122 aa9.71□□□□□ -0.86
COMMD4-209ENST00000564068 UBE2E1P51965 193 aa9.71□□□□□ -0.86
COMMD4-209ENST00000564068 FAM223AQ8IWN6 122 aa9.71□□□□□ -0.86
COMMD4-209ENST00000564068 POLQO75417 2590 aa9.7□□□□□ -0.86
COMMD4-209ENST00000564068 NDUFA11Q86Y39 141 aa9.7□□□□□ -0.86
COMMD4-209ENST00000564068 PRSS47A8MTI9 375 aa9.7□□□□□ -0.86
COMMD4-209ENST00000564068 SYNJ2BPP57105 145 aa9.7□□□□□ -0.86
COMMD4-209ENST00000564068 TOMM6Q96B49 74 aa9.7□□□□□ -0.86
COMMD4-209ENST00000564068 JPT2Q9H910 190 aa9.7□□□□□ -0.86
COMMD4-209ENST00000564068 IGFL2Q6UWQ7 119 aa9.7□□□□□ -0.86
COMMD4-209ENST00000564068 RNF185Q96GF1 192 aa9.7□□□□□ -0.86
COMMD4-209ENST00000564068 USMG5Q96IX5 58 aa9.7□□□□□ -0.86
COMMD4-209ENST00000564068 OPRPNQ99935 248 aaPredicted RBP9.7□□□□□ -0.86
COMMD4-209ENST00000564068 PAX4O43316 350 aa9.69□□□□□ -0.86
COMMD4-209ENST00000564068 C11orf68Q9H3H3 251 aaKnown RBP9.69□□□□□ -0.86
COMMD4-209ENST00000564068 CRPP02741 224 aa9.69□□□□□ -0.86
COMMD4-209ENST00000564068 TCTEX1D4Q5JR98 221 aa9.69□□□□□ -0.86
COMMD4-209ENST00000564068 CITED1Q99966 193 aa9.69□□□□□ -0.86
COMMD4-209ENST00000564068 SUMO4Q6EEV6 95 aa9.68□□□□□ -0.86
COMMD4-209ENST00000564068 LRP4O75096 1905 aa9.68□□□□□ -0.86
COMMD4-209ENST00000564068 NPBQ8NG41 125 aa9.68□□□□□ -0.86
COMMD4-209ENST00000564068 CCL19Q99731 98 aa9.68□□□□□ -0.86
COMMD4-209ENST00000564068 U3KQK5 164 aa9.68□□□□□ -0.86
COMMD4-209ENST00000564068 IGHV1-69DA0A0B4J2H0 117 aa9.68□□□□□ -0.86
COMMD4-209ENST00000564068 C11orf44Q8N8P7 122 aa9.68□□□□□ -0.86
COMMD4-209ENST00000564068 IGHV1OR15-1A0A075B7D0 117 aa9.67□□□□□ -0.86
COMMD4-209ENST00000564068 RASL10AQ92737 203 aa9.67□□□□□ -0.86
COMMD4-209ENST00000564068 A0A096LNJ9 63 aa9.67□□□□□ -0.86
COMMD4-209ENST00000564068 TRGV1A0A0A0MS02 117 aa9.67□□□□□ -0.86
COMMD4-209ENST00000564068 RBMY1BA6NDE4 496 aaKnown RBP9.67□□□□□ -0.86
COMMD4-209ENST00000564068 RBMY1EA6NEQ0 496 aaKnown RBP9.67□□□□□ -0.86
COMMD4-209ENST00000564068 RBMY1DP0C7P1 496 aaKnown RBP9.67□□□□□ -0.86
COMMD4-209ENST00000564068 RBMY1A1P0DJD3 496 aaKnown RBP9.67□□□□□ -0.86
COMMD4-209ENST00000564068 RBMY1CP0DJD4 496 aa9.67□□□□□ -0.86
COMMD4-209ENST00000564068 DAND5Q8N907 189 aa9.67□□□□□ -0.86
COMMD4-209ENST00000564068 NDUFA4O00483 81 aa9.67□□□□□ -0.86
COMMD4-209ENST00000564068 IGF1P05019 195 aa9.67□□□□□ -0.86
COMMD4-209ENST00000564068 DEFB131AP59861 70 aa9.67□□□□□ -0.86
COMMD4-209ENST00000564068 HHLA3Q9XRX5 114 aa9.67□□□□□ -0.86
COMMD4-209ENST00000564068 XIRP2A4UGR9 3374 aa9.67□□□□□ -0.86
COMMD4-209ENST00000564068 UBE2E2Q96LR5 201 aa9.67□□□□□ -0.86
COMMD4-209ENST00000564068 LENEPQ9Y5L5 61 aa9.67□□□□□ -0.86
COMMD4-209ENST00000564068 TET2Q6N021 2002 aaPredicted RBP9.67□□□□□ -0.86
COMMD4-209ENST00000564068 ATP6V0E2Q8NHE4 81 aa9.66□□□□□ -0.86
COMMD4-209ENST00000564068 TRANK1O15050 2925 aa9.66□□□□□ -0.86
COMMD4-209ENST00000564068 PIP4P2Q8N4L2 257 aa9.66□□□□□ -0.86
COMMD4-209ENST00000564068 Q8N9W7 124 aa9.66□□□□□ -0.86
COMMD4-209ENST00000564068 LEPROTO15243 131 aa9.66□□□□□ -0.86
COMMD4-209ENST00000564068 CHCHD5Q9BSY4 110 aa9.66□□□□□ -0.86
COMMD4-209ENST00000564068 A0A1W2PRX2 142 aa9.65□□□□□ -0.86
COMMD4-209ENST00000564068 USP9YO00507 2555 aaPredicted RBP9.65□□□□□ -0.86
COMMD4-209ENST00000564068 MRPL53Q96EL3 112 aaKnown RBP9.65□□□□□ -0.86
COMMD4-209ENST00000564068 XGP55808 180 aa9.65□□□□□ -0.86
COMMD4-209ENST00000564068 C9orf47Q6ZRZ4 202 aa9.64□□□□□ -0.87
COMMD4-209ENST00000564068 CLEC2BQ92478 149 aa9.64□□□□□ -0.87
COMMD4-209ENST00000564068 HIVEP2P31629 2446 aa9.64□□□□□ -0.87
COMMD4-209ENST00000564068 USP34Q70CQ2 3546 aa9.64□□□□□ -0.87
COMMD4-209ENST00000564068 TEX49A0A1B0GTD5 131 aa9.64□□□□□ -0.87
COMMD4-209ENST00000564068 RPL36AP83881 106 aaKnown RBP9.64□□□□□ -0.87
COMMD4-209ENST00000564068 Q8N1Y9 231 aa9.64□□□□□ -0.87
COMMD4-209ENST00000564068 RPL36ALQ969Q0 106 aaKnown RBP9.64□□□□□ -0.87
COMMD4-209ENST00000564068 SPANXA1Q9NS26 97 aa9.64□□□□□ -0.87
COMMD4-209ENST00000564068 ZNF415Q09FC8 603 aa9.64□□□□□ -0.87
COMMD4-209ENST00000564068 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.64□□□□□ -0.87
COMMD4-209ENST00000564068 IGKV2-29A2NJV5 120 aaPredicted RBP9.64□□□□□ -0.87
COMMD4-209ENST00000564068 CRYGBP07316 175 aa9.64□□□□□ -0.87
COMMD4-209ENST00000564068 STHQ8IWL8 128 aa9.64□□□□□ -0.87
COMMD4-209ENST00000564068 NEXN-AS1Q8NBZ9 246 aa9.63□□□□□ -0.87
COMMD4-209ENST00000564068 SPATA25Q9BR10 227 aa9.63□□□□□ -0.87
COMMD4-209ENST00000564068 FAM236AA0A1B0GUQ0 79 aa9.63□□□□□ -0.87
COMMD4-209ENST00000564068 FAM236BA0A1B0GV22 79 aa9.63□□□□□ -0.87
COMMD4-209ENST00000564068 COL6A3P12111 3177 aa9.63□□□□□ -0.87
COMMD4-209ENST00000564068 IGHV7-4-1A0A0J9YVY3 117 aa9.63□□□□□ -0.87
COMMD4-209ENST00000564068 HOXB4P17483 251 aaPredicted RBP9.63□□□□□ -0.87
COMMD4-209ENST00000564068 SMAD5-AS1Q9Y6J3 95 aa9.63□□□□□ -0.87
COMMD4-209ENST00000564068 ICOSQ9Y6W8 199 aa9.63□□□□□ -0.87
COMMD4-209ENST00000564068 CENPVL3A0A0U1RRI6 287 aa9.62□□□□□ -0.87
COMMD4-209ENST00000564068 TRGV4A0A0C4DH28 118 aa9.62□□□□□ -0.87
COMMD4-209ENST00000564068 A0A0J9YY99 117 aa9.62□□□□□ -0.87
COMMD4-209ENST00000564068 LINC01548A6NM66 108 aa9.62□□□□□ -0.87
COMMD4-209ENST00000564068 HERV-K104P63124 156 aa9.62□□□□□ -0.87
COMMD4-209ENST00000564068 C11orf21Q9P2W6 132 aa9.62□□□□□ -0.87
COMMD4-209ENST00000564068 INAFM2P0DMQ5 153 aa9.62□□□□□ -0.87
COMMD4-209ENST00000564068 PFN2P35080 140 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms