RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 IL15RAQ13261 267 aa8.67□□□□□ -1.02
RPAP1-204ENST00000562303 DEFB125Q8N687 156 aa8.67□□□□□ -1.02
RPAP1-204ENST00000562303 CITED1Q99966 193 aa8.67□□□□□ -1.02
RPAP1-204ENST00000562303 VWA8A3KMH1 1905 aa8.67□□□□□ -1.02
RPAP1-204ENST00000562303 TMEM89A2RUT3 159 aa8.67□□□□□ -1.02
RPAP1-204ENST00000562303 ACYP1P07311 99 aa8.67□□□□□ -1.02
RPAP1-204ENST00000562303 PROP1O75360 226 aa8.66□□□□□ -1.02
RPAP1-204ENST00000562303 RPL39P62891 51 aaKnown RBP8.66□□□□□ -1.02
RPAP1-204ENST00000562303 PRAC2D3DTV9 90 aa8.66□□□□□ -1.02
RPAP1-204ENST00000562303 C14orf177Q52M58 125 aa8.66□□□□□ -1.02
RPAP1-204ENST00000562303 FGF23Q9GZV9 251 aaPredicted RBP8.66□□□□□ -1.02
RPAP1-204ENST00000562303 ANK1P16157 1881 aa8.66□□□□□ -1.02
RPAP1-204ENST00000562303 CCL25O15444 150 aa8.66□□□□□ -1.02
RPAP1-204ENST00000562303 IGKV3D-7A0A0C4DH55 119 aa8.65□□□□□ -1.02
RPAP1-204ENST00000562303 LRCOL1A6NCL2 159 aa8.65□□□□□ -1.02
RPAP1-204ENST00000562303 GTSF1Q8WW33 167 aa8.65□□□□□ -1.02
RPAP1-204ENST00000562303 PRO0255Q9UI72 69 aa8.65□□□□□ -1.02
RPAP1-204ENST00000562303 WDR81Q562E7 1941 aa8.65□□□□□ -1.02
RPAP1-204ENST00000562303 A4D1N5 150 aa8.65□□□□□ -1.02
RPAP1-204ENST00000562303 SEC61GP60059 68 aa8.65□□□□□ -1.02
RPAP1-204ENST00000562303 PLXNA3P51805 1871 aa8.65□□□□□ -1.02
RPAP1-204ENST00000562303 Q6ZVH6 145 aa8.65□□□□□ -1.02
RPAP1-204ENST00000562303 Q8N7P7 452 aa8.65□□□□□ -1.02
RPAP1-204ENST00000562303 WFDC11Q8NEX6 87 aa8.65□□□□□ -1.02
RPAP1-204ENST00000562303 WI2-2373I1.2A0A1W2PRP0 233 aa8.65□□□□□ -1.03
RPAP1-204ENST00000562303 HIGD2BQ4VC39 106 aa8.65□□□□□ -1.03
RPAP1-204ENST00000562303 CACNA1HO95180 2353 aa8.65□□□□□ -1.03
RPAP1-204ENST00000562303 TMEM263Q8WUH6 116 aaKnown RBP8.64□□□□□ -1.03
RPAP1-204ENST00000562303 PSMB8P28062 276 aa8.64□□□□□ -1.03
RPAP1-204ENST00000562303 DEFB1P60022 68 aa8.64□□□□□ -1.03
RPAP1-204ENST00000562303 PATE2Q6UY27 113 aa8.64□□□□□ -1.03
RPAP1-204ENST00000562303 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.64□□□□□ -1.032e-6■■■■□ 21.3
RPAP1-204ENST00000562303 TMEM61Q8N0U2 210 aa8.64□□□□□ -1.03
RPAP1-204ENST00000562303 LECT2O14960 151 aa8.63□□□□□ -1.03
RPAP1-204ENST00000562303 NPSP0C0P6 89 aa8.63□□□□□ -1.03
RPAP1-204ENST00000562303 A0A0B4J2C4 111 aa8.63□□□□□ -1.03
RPAP1-204ENST00000562303 NDUFA11Q86Y39 141 aa8.63□□□□□ -1.03
RPAP1-204ENST00000562303 SIRPDQ9H106 197 aa8.62□□□□□ -1.03
RPAP1-204ENST00000562303 TEX22C9J3V5 150 aa8.62□□□□□ -1.03
RPAP1-204ENST00000562303 MAP6D1Q9H9H5 199 aa8.62□□□□□ -1.03
RPAP1-204ENST00000562303 A6NDX4 124 aa8.62□□□□□ -1.03
RPAP1-204ENST00000562303 DOCK11Q5JSL3 2073 aa8.62□□□□□ -1.03
RPAP1-204ENST00000562303 TRBV12-3P01733 135 aa8.62□□□□□ -1.03
RPAP1-204ENST00000562303 MIR7-3HGQ8N6C7 128 aa8.62□□□□□ -1.03
RPAP1-204ENST00000562303 C10orf91Q5T1B1 145 aa8.61□□□□□ -1.03
RPAP1-204ENST00000562303 HIGD2AQ9BW72 106 aa8.61□□□□□ -1.03
RPAP1-204ENST00000562303 TRAV26-1A0A087WT03 109 aa8.61□□□□□ -1.03
RPAP1-204ENST00000562303 HILS1P60008 231 aa8.61□□□□□ -1.03
RPAP1-204ENST00000562303 COX7BP24311 80 aa8.61□□□□□ -1.03
RPAP1-204ENST00000562303 JMJD7-PLA2G4BH0Y9G9 81 aa8.61□□□□□ -1.03
RPAP1-204ENST00000562303 MED14OSP0DP75 135 aa8.61□□□□□ -1.03
RPAP1-204ENST00000562303 TOMM6Q96B49 74 aa8.61□□□□□ -1.03
RPAP1-204ENST00000562303 MDFICQ9P1T7 246 aa8.61□□□□□ -1.03
RPAP1-204ENST00000562303 MALRD1Q5VYJ5 2156 aa8.61□□□□□ -1.03
RPAP1-204ENST00000562303 IGKV4-1P06312 121 aa8.6□□□□□ -1.03
RPAP1-204ENST00000562303 LOXL1Q08397 574 aaPredicted RBP8.6□□□□□ -1.03
RPAP1-204ENST00000562303 UNQ9165/PRO28630Q6UXU0 137 aa8.6□□□□□ -1.03
RPAP1-204ENST00000562303 A0A0J9YX75 114 aa8.6□□□□□ -1.03
RPAP1-204ENST00000562303 KRTAP27-1Q3LI81 207 aa8.6□□□□□ -1.03
RPAP1-204ENST00000562303 SPANXCQ9NY87 97 aa8.6□□□□□ -1.03
RPAP1-204ENST00000562303 GTF3C1Q12789 2109 aa8.59□□□□□ -1.03
RPAP1-204ENST00000562303 CREBBPQ92793 2442 aa8.59□□□□□ -1.03
RPAP1-204ENST00000562303 LINC00173Q6ZV60 143 aa8.59□□□□□ -1.03
RPAP1-204ENST00000562303 IGLV1-47P01700 117 aa8.59□□□□□ -1.03
RPAP1-204ENST00000562303 DYSFO75923 2080 aa8.59□□□□□ -1.03
RPAP1-204ENST00000562303 INAFM1C9JVW0 142 aa8.59□□□□□ -1.03
RPAP1-204ENST00000562303 LINC01620Q4KN68 170 aa8.59□□□□□ -1.03
RPAP1-204ENST00000562303 A0A087WZ39 114 aa8.59□□□□□ -1.04
RPAP1-204ENST00000562303 A0A096LNI7 61 aa8.59□□□□□ -1.04
RPAP1-204ENST00000562303 CRYGDP07320 174 aa8.59□□□□□ -1.04
RPAP1-204ENST00000562303 ZSWIM8A7E2V4 1837 aa8.58□□□□□ -1.04
RPAP1-204ENST00000562303 LGALS9O00182 355 aa8.58□□□□□ -1.04
RPAP1-204ENST00000562303 ANKRD39Q53RE8 183 aa8.58□□□□□ -1.04
RPAP1-204ENST00000562303 LRRC75A-AS1Q8N1F1 130 aa8.58□□□□□ -1.04
RPAP1-204ENST00000562303 DEFB131BA0A096LNP1 70 aa8.58□□□□□ -1.04
RPAP1-204ENST00000562303 SPATA25Q9BR10 227 aa8.58□□□□□ -1.04
RPAP1-204ENST00000562303 CASC2Q6XLA1 102 aa8.58□□□□□ -1.04
RPAP1-204ENST00000562303 LINC00269Q8N2A0 174 aa8.58□□□□□ -1.04
RPAP1-204ENST00000562303 PLXNA4Q9HCM2 1894 aa8.58□□□□□ -1.04
RPAP1-204ENST00000562303 PCNX1Q96RV3 2341 aa8.57□□□□□ -1.04
RPAP1-204ENST00000562303 TRBV6-1A0A0K0K1D8 114 aa8.57□□□□□ -1.04
RPAP1-204ENST00000562303 TNFRSF13BO14836 293 aaPredicted RBP8.57□□□□□ -1.04
RPAP1-204ENST00000562303 CLEC2BQ92478 149 aa8.57□□□□□ -1.04
RPAP1-204ENST00000562303 EML6Q6ZMW3 1958 aa8.57□□□□□ -1.04
RPAP1-204ENST00000562303 C11orf86A6NJI1 115 aa8.57□□□□□ -1.04
RPAP1-204ENST00000562303 TMEM256-PLSCR3K7ERE1 68 aa8.57□□□□□ -1.04
RPAP1-204ENST00000562303 REG3AQ06141 175 aa8.57□□□□□ -1.04
RPAP1-204ENST00000562303 TRBV10-1A0A0K0K1A3 114 aa8.57□□□□□ -1.04
RPAP1-204ENST00000562303 FAM222AQ5U5X8 452 aa8.57□□□□□ -1.04
RPAP1-204ENST00000562303 KIR2DL5BQ8NHK3 375 aa8.57□□□□□ -1.04
RPAP1-204ENST00000562303 FAM19A1Q7Z5A9 133 aa8.57□□□□□ -1.04
RPAP1-204ENST00000562303 PLCE1Q9P212 2302 aa8.57□□□□□ -1.04
RPAP1-204ENST00000562303 IGHV1-58A0A0C4DH39 117 aa8.56□□□□□ -1.04
RPAP1-204ENST00000562303 ATOX1O00244 68 aa8.56□□□□□ -1.04
RPAP1-204ENST00000562303 FAM167A-AS1Q96KT0 104 aa8.56□□□□□ -1.04
RPAP1-204ENST00000562303 FBXL19-AS1Q494R0 122 aa8.56□□□□□ -1.04
RPAP1-204ENST00000562303 HEATR5AQ86XA9 2040 aa8.56□□□□□ -1.04
RPAP1-204ENST00000562303 FAM110AQ9BQ89 295 aa8.56□□□□□ -1.04
RPAP1-204ENST00000562303 PLA2G5P39877 138 aa8.56□□□□□ -1.04
RPAP1-204ENST00000562303 UFSP1Q6NVU6 142 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms