RNA–Protein interactions for RNA: ENST00000561442.5

USP3-221, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-221ENST00000561442 COA6Q5JTJ3 125 aaKnown RBP10.05□□□□□ -0.8
USP3-221ENST00000561442 POM121L12Q8N7R1 296 aa10.05□□□□□ -0.8
USP3-221ENST00000561442 OCC1Q8TAD7 63 aa10.05□□□□□ -0.8
USP3-221ENST00000561442 DAZAP1Q96EP5 407 aaKnown RBP10.05□□□□□ -0.8
USP3-221ENST00000561442 ZNF479Q96JC4 524 aa10.05□□□□□ -0.8
USP3-221ENST00000561442 IL36BQ9NZH7 164 aa10.05□□□□□ -0.8
USP3-221ENST00000561442 TRAV4A0A0B4J268 109 aa10.04□□□□□ -0.8
USP3-221ENST00000561442 A0A1W2PPQ1 181 aa10.04□□□□□ -0.8
USP3-221ENST00000561442 TRGC1P0CF51 173 aa10.04□□□□□ -0.8
USP3-221ENST00000561442 DNLZQ5SXM8 178 aa10.04□□□□□ -0.8
USP3-221ENST00000561442 OR4C5Q8NGB2 326 aa10.04□□□□□ -0.8
USP3-221ENST00000561442 C12orf57Q99622 126 aa10.04□□□□□ -0.8
USP3-221ENST00000561442 KMT2AQ03164 3969 aa10.04□□□□□ -0.8
USP3-221ENST00000561442 TRGV4A0A0C4DH28 118 aa10.03□□□□□ -0.8
USP3-221ENST00000561442 K7EN84 100 aa10.03□□□□□ -0.8
USP3-221ENST00000561442 S100A2P29034 98 aa10.03□□□□□ -0.8
USP3-221ENST00000561442 NDUFA6P56556 154 aa10.03□□□□□ -0.8
USP3-221ENST00000561442 FHL2Q14192 279 aa10.03□□□□□ -0.8
USP3-221ENST00000561442 FAM231DQ6ZW35 169 aa10.03□□□□□ -0.8
USP3-221ENST00000561442 C15orf53Q8NAA6 179 aa10.03□□□□□ -0.8
USP3-221ENST00000561442 OR2D3Q8NGH3 330 aa10.03□□□□□ -0.8
USP3-221ENST00000561442 FRZBQ92765 325 aa10.03□□□□□ -0.8
USP3-221ENST00000561442 C19orf71A6NCJ1 209 aa10.02□□□□□ -0.81
USP3-221ENST00000561442 P01737 135 aa10.02□□□□□ -0.81
USP3-221ENST00000561442 GZMBP10144 247 aa10.02□□□□□ -0.81
USP3-221ENST00000561442 CFAP126Q5VTH2 177 aa10.02□□□□□ -0.81
USP3-221ENST00000561442 LGALS9CQ6DKI2 356 aa10.02□□□□□ -0.81
USP3-221ENST00000561442 PHLDA3Q9Y5J5 127 aa10.02□□□□□ -0.81
USP3-221ENST00000561442 DNAH6Q9C0G6 4158 aa10.02□□□□□ -0.81
USP3-221ENST00000561442 HYDINQ4G0P3 5121 aa10.01□□□□□ -0.81
USP3-221ENST00000561442 IGHV3-73A0A0B4J1V6 119 aa10.01□□□□□ -0.81
USP3-221ENST00000561442 MUC21A0A0G2JKD1 596 aa10.01□□□□□ -0.81
USP3-221ENST00000561442 MUC21A0A140T8X8 626 aa10.01□□□□□ -0.81
USP3-221ENST00000561442 M0R381 172 aa10.01□□□□□ -0.81
USP3-221ENST00000561442 RS1O15537 224 aa10.01□□□□□ -0.81
USP3-221ENST00000561442 PAX4O43316 350 aa10.01□□□□□ -0.81
USP3-221ENST00000561442 MT-ND6P03923 174 aa10.01□□□□□ -0.81
USP3-221ENST00000561442 ERVFC1-1P60608 527 aa10.01□□□□□ -0.81
USP3-221ENST00000561442 DMRTA1Q5VZB9 504 aa10.01□□□□□ -0.81
USP3-221ENST00000561442 PTH2Q96A98 100 aa10.01□□□□□ -0.81
USP3-221ENST00000561442 VSIG2Q96IQ7 327 aa10.01□□□□□ -0.81
USP3-221ENST00000561442 RNASE7Q9H1E1 156 aaKnown RBP10.01□□□□□ -0.81
USP3-221ENST00000561442 JPT2Q9H910 190 aa10.01□□□□□ -0.81
USP3-221ENST00000561442 SCRT2Q9NQ03 307 aa10.01□□□□□ -0.81
USP3-221ENST00000561442 HHLA3Q9XRX5 114 aa10.01□□□□□ -0.81
USP3-221ENST00000561442 CRYBA4P53673 196 aa10□□□□□ -0.81
USP3-221ENST00000561442 SSTP61278 116 aa10□□□□□ -0.81
USP3-221ENST00000561442 WDR73Q6P4I2 378 aa10□□□□□ -0.81
USP3-221ENST00000561442 RASL11AQ6T310 242 aa10□□□□□ -0.81
USP3-221ENST00000561442 SYT8Q8NBV8 401 aa10□□□□□ -0.81
USP3-221ENST00000561442 NUDT10Q8NFP7 164 aa10□□□□□ -0.81
USP3-221ENST00000561442 NUDT11Q96G61 164 aa10□□□□□ -0.81
USP3-221ENST00000561442 TPPP3Q9BW30 176 aa10□□□□□ -0.81
USP3-221ENST00000561442 PRO0255Q9UI72 69 aa10□□□□□ -0.81
USP3-221ENST00000561442 V9GYV3 84 aa10□□□□□ -0.81
USP3-221ENST00000561442 P0DMU3 169 aa9.99□□□□□ -0.81
USP3-221ENST00000561442 FAM231AP0DMU4 169 aa9.99□□□□□ -0.81
USP3-221ENST00000561442 FAM231CP0DMU5 169 aa9.99□□□□□ -0.81
USP3-221ENST00000561442 SLAQ13239 276 aa9.99□□□□□ -0.81
USP3-221ENST00000561442 UBE2DNLQ8IWF7 75 aa9.99□□□□□ -0.81
USP3-221ENST00000561442 HIST3H2BBQ8N257 126 aa9.99□□□□□ -0.81
USP3-221ENST00000561442 OR10AG1Q8NH19 301 aa9.99□□□□□ -0.81
USP3-221ENST00000561442 A8MWV9 139 aa9.98□□□□□ -0.81
USP3-221ENST00000561442 MED14OSP0DP75 135 aa9.98□□□□□ -0.81
USP3-221ENST00000561442 RPS20P60866 119 aaKnown RBP9.98□□□□□ -0.81
USP3-221ENST00000561442 SAMD10Q9BYL1 202 aa9.98□□□□□ -0.81
USP3-221ENST00000561442 RPP21Q9H633 154 aaKnown RBP9.98□□□□□ -0.81
USP3-221ENST00000561442 TRAPPC1Q9Y5R8 145 aa9.98□□□□□ -0.81
USP3-221ENST00000561442 MUC4Q99102 2169 aa9.97□□□□□ -0.81
USP3-221ENST00000561442 A0A096LPF7 62 aa9.97□□□□□ -0.81
USP3-221ENST00000561442 SMIM27A0A1W2PRY6 76 aa9.97□□□□□ -0.81
USP3-221ENST00000561442 XKRY2A2RUG3 117 aa9.97□□□□□ -0.81
USP3-221ENST00000561442 SNAI2O43623 268 aa9.97□□□□□ -0.81
USP3-221ENST00000561442 OR5AL1P0C617 328 aa9.97□□□□□ -0.81
USP3-221ENST00000561442 GATA1P15976 413 aaPredicted RBP9.97□□□□□ -0.81
USP3-221ENST00000561442 CT83Q5H943 113 aa9.97□□□□□ -0.81
USP3-221ENST00000561442 PIK3CD-AS1Q5SR53 167 aa9.97□□□□□ -0.81
USP3-221ENST00000561442 FER1L6-AS1Q8NA97 138 aa9.97□□□□□ -0.81
USP3-221ENST00000561442 GNB1LQ9BYB4 327 aa9.97□□□□□ -0.81
USP3-221ENST00000561442 A0A087WWL8 130 aa9.96□□□□□ -0.82
USP3-221ENST00000561442 LOC100131303A0A0U1RQF7 123 aa9.96□□□□□ -0.82
USP3-221ENST00000561442 H3BNG1 76 aa9.96□□□□□ -0.82
USP3-221ENST00000561442 GATCO43716 136 aaKnown RBP9.96□□□□□ -0.82
USP3-221ENST00000561442 IGLC6P0CF74 106 aa9.96□□□□□ -0.82
USP3-221ENST00000561442 GYPEP15421 78 aa9.96□□□□□ -0.82
USP3-221ENST00000561442 FAM74A4Q5TZK3 123 aa9.96□□□□□ -0.82
USP3-221ENST00000561442 SPANXN1Q5VSR9 72 aa9.96□□□□□ -0.82
USP3-221ENST00000561442 Q6ZSN1 163 aa9.96□□□□□ -0.82
USP3-221ENST00000561442 SSBP4Q9BWG4 385 aaPredicted RBP9.96□□□□□ -0.82
USP3-221ENST00000561442 ICOSQ9Y6W8 199 aa9.96□□□□□ -0.82
USP3-221ENST00000561442 DNAH2Q9P225 4427 aa9.96□□□□□ -0.82
USP3-221ENST00000561442 NXPH4O95158 308 aa9.95□□□□□ -0.82
USP3-221ENST00000561442 SLC25A29Q8N8R3 303 aa9.95□□□□□ -0.82
USP3-221ENST00000561442 DNAH10Q8IVF4 4471 aa9.95□□□□□ -0.82
USP3-221ENST00000561442 FAM231BA6NCW3 169 aa9.94□□□□□ -0.82
USP3-221ENST00000561442 K7EQD1 137 aa9.94□□□□□ -0.82
USP3-221ENST00000561442 HLA-DQA1P01909 254 aa9.94□□□□□ -0.82
USP3-221ENST00000561442 CCL18P55774 89 aa9.94□□□□□ -0.82
USP3-221ENST00000561442 UFSP1Q6NVU6 142 aa9.94□□□□□ -0.82
USP3-221ENST00000561442 LYZL1Q6UWQ5 148 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms