RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 FAM25GB3EWG6 89 aa0.73□□□□□ -2.29
USP8-211ENST00000560527 NCR3O14931 201 aa0.73□□□□□ -2.29
USP8-211ENST00000560527 NPFFO15130 113 aa0.73□□□□□ -2.29
USP8-211ENST00000560527 DLEU1O43261 78 aa0.73□□□□□ -2.29
USP8-211ENST00000560527 CD3DP04234 171 aa0.73□□□□□ -2.29
USP8-211ENST00000560527 HLA-DRB4P13762 266 aa0.73□□□□□ -2.29
USP8-211ENST00000560527 AKR1D1P51857 326 aa0.73□□□□□ -2.29
USP8-211ENST00000560527 EFNA4P52798 201 aa0.73□□□□□ -2.29
USP8-211ENST00000560527 LSM3P62310 102 aaKnown RBP0.73□□□□□ -2.29
USP8-211ENST00000560527 QRFPP83859 136 aa0.73□□□□□ -2.29
USP8-211ENST00000560527 OCIAD2Q56VL3 154 aa0.73□□□□□ -2.29
USP8-211ENST00000560527 CLLU1Q5K131 121 aa0.73□□□□□ -2.29
USP8-211ENST00000560527 TMEM91Q6ZNR0 172 aa0.73□□□□□ -2.29
USP8-211ENST00000560527 SBSPONQ8IVN8 264 aa0.73□□□□□ -2.29
USP8-211ENST00000560527 MMGT1Q8N4V1 131 aa0.73□□□□□ -2.29
USP8-211ENST00000560527 OR4S1Q8NGB4 309 aa0.73□□□□□ -2.29
USP8-211ENST00000560527 ARL11Q969Q4 196 aa0.73□□□□□ -2.29
USP8-211ENST00000560527 AMELYQ99218 206 aa0.73□□□□□ -2.29
USP8-211ENST00000560527 LINC00470Q9BZP3 86 aa0.73□□□□□ -2.29
USP8-211ENST00000560527 DNAJC15Q9Y5T4 150 aa0.73□□□□□ -2.29
USP8-211ENST00000560527 HLA-DRB4X5D2U9 266 aa0.73□□□□□ -2.29
USP8-211ENST00000560527 TENM3Q9P273 2699 aa0.73□□□□□ -2.29
USP8-211ENST00000560527 PTPRFP10586 1907 aa0.73□□□□□ -2.29
USP8-211ENST00000560527 MYLKQ15746 1914 aa0.73□□□□□ -2.29
USP8-211ENST00000560527 ASCC3Q8N3C0 2202 aaKnown RBP0.73□□□□□ -2.29
USP8-211ENST00000560527 MED12Q93074 2177 aa0.73□□□□□ -2.29
USP8-211ENST00000560527 SPEF2Q9C093 1822 aa0.73□□□□□ -2.29
USP8-211ENST00000560527 GRIN2AQ12879 1464 aa0.73□□□□□ -2.29
USP8-211ENST00000560527 RBBP6Q7Z6E9 1792 aaKnown RBP0.73□□□□□ -2.29
USP8-211ENST00000560527 OVOS2A0A0J9YW53 1432 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 ARHGAP31Q2M1Z3 1444 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 OVOS2Q6IE36 1432 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 CHD3Q12873 2000 aaKnown RBP0.72□□□□□ -2.29
USP8-211ENST00000560527 CEP295Q9C0D2 2601 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 NBEAQ8NFP9 2946 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 CELSR2Q9HCU4 2923 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 ROCK2O75116 1388 aaKnown RBP0.72□□□□□ -2.29
USP8-211ENST00000560527 E9PCH4 1651 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 MYH9P35579 1960 aaKnown RBP0.72□□□□□ -2.29
USP8-211ENST00000560527 PHRF1Q9P1Y6 1649 aaKnown RBP0.72□□□□□ -2.29
USP8-211ENST00000560527 GVINP1Q7Z2Y8 2422 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 IGHV1-24A0A0C4DH33 117 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 BBIP1A8MTZ0 92 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 ZNF670-ZNF695F2Z2N8 137 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 TPST1O60507 370 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 IGF2P01344 180 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 APOC1P02654 83 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 TSPAN19P0C672 248 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 HIST1H1BP16401 226 aaKnown RBP0.72□□□□□ -2.29
USP8-211ENST00000560527 ETV6P41212 452 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 SELENOWP63302 87 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 SPCS2Q15005 226 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 SPATA45Q537H7 98 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 IZUMO2Q6UXV1 221 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 C10orf111Q8N326 155 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 TCTEX1D1Q8N7M0 179 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 TET1Q8NFU7 2136 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 MAGOHBQ96A72 148 aaKnown RBP0.72□□□□□ -2.29
USP8-211ENST00000560527 SMIM7Q9BQ49 75 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 C2orf88Q9BSF0 95 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 METTL1Q9UBP6 276 aaKnown RBP0.72□□□□□ -2.29
USP8-211ENST00000560527 LSM2Q9Y333 95 aaKnown RBP0.72□□□□□ -2.29
USP8-211ENST00000560527 SLIT1O75093 1534 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 BCORL1Q5H9F3 1711 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 DISP2A7MBM2 1401 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 PTPRGP23470 1445 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 USP54Q70EL1 1684 aa0.72□□□□□ -2.29
USP8-211ENST00000560527 TMEM131LA2VDJ0 1609 aa0.71□□□□□ -2.3
USP8-211ENST00000560527 MUC5BQ9HC84 5762 aaPredicted RBP0.71□□□□□ -2.3
USP8-211ENST00000560527 A0A0G2JMM0 328 aa0.71□□□□□ -2.3
USP8-211ENST00000560527 A0A0J9YY99 117 aa0.71□□□□□ -2.3
USP8-211ENST00000560527 LOC100130705A0A1B0GUX0 176 aa0.71□□□□□ -2.3
USP8-211ENST00000560527 A0A1W2PPB8 328 aa0.71□□□□□ -2.3
USP8-211ENST00000560527 A0A1W2PRS3 328 aa0.71□□□□□ -2.3
USP8-211ENST00000560527 IFITM5A6NNB3 132 aa0.71□□□□□ -2.3
USP8-211ENST00000560527 KIR3DP1A8MWS1 328 aa0.71□□□□□ -2.3
USP8-211ENST00000560527 IGKCP01834 107 aa0.71□□□□□ -2.3
USP8-211ENST00000560527 IL7P13232 177 aa0.71□□□□□ -2.3
USP8-211ENST00000560527 PDE6GP18545 87 aa0.71□□□□□ -2.3
USP8-211ENST00000560527 S100A1P23297 94 aa0.71□□□□□ -2.3
USP8-211ENST00000560527 FXYD4P59646 89 aa0.71□□□□□ -2.3
USP8-211ENST00000560527 RPL37AP61513 92 aaKnown RBP0.71□□□□□ -2.3
USP8-211ENST00000560527 EMX2Q04743 252 aa0.71□□□□□ -2.3
USP8-211ENST00000560527 LINC00299Q6ZSB3 139 aa0.71□□□□□ -2.3
USP8-211ENST00000560527 C1orf54Q8WWF1 131 aa0.71□□□□□ -2.3
USP8-211ENST00000560527 CGREF1Q99674 301 aa0.71□□□□□ -2.3
USP8-211ENST00000560527 SLC35B3Q9H1N7 401 aa0.71□□□□□ -2.3
USP8-211ENST00000560527 GNG8Q9UK08 70 aa0.71□□□□□ -2.3
USP8-211ENST00000560527 EP300Q09472 2414 aaPredicted RBP0.71□□□□□ -2.3
USP8-211ENST00000560527 MUC4Q99102 2169 aa0.71□□□□□ -2.3
USP8-211ENST00000560527 PREX1Q8TCU6 1659 aa0.71□□□□□ -2.3
USP8-211ENST00000560527 PRG4Q92954 1404 aaPredicted RBP0.71□□□□□ -2.3
USP8-211ENST00000560527 CDH23Q9H251 3354 aa0.71□□□□□ -2.3
USP8-211ENST00000560527 CEP290O15078 2479 aa0.71□□□□□ -2.3
USP8-211ENST00000560527 CEP250Q9BV73 2442 aa0.7□□□□□ -2.3
USP8-211ENST00000560527 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.7□□□□□ -2.3
USP8-211ENST00000560527 NINQ8N4C6 2090 aa0.7□□□□□ -2.3
USP8-211ENST00000560527 ANK1P16157 1881 aa0.7□□□□□ -2.3
USP8-211ENST00000560527 COL4A6Q14031 1691 aa0.7□□□□□ -2.3
USP8-211ENST00000560527 DSTQ03001 7570 aaKnown RBP0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms