RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 DPH3P1Q9H4G8 78 aa7.93□□□□□ -1.14
SNRPA1-211ENST00000560433 INSP01308 110 aa7.92□□□□□ -1.14
SNRPA1-211ENST00000560433 GIG44P09565 113 aaPredicted RBP7.92□□□□□ -1.14
SNRPA1-211ENST00000560433 DNLZQ5SXM8 178 aa7.92□□□□□ -1.14
SNRPA1-211ENST00000560433 OR2K2Q8NGT1 345 aa7.92□□□□□ -1.14
SNRPA1-211ENST00000560433 AP1S3Q96PC3 154 aa7.92□□□□□ -1.14
SNRPA1-211ENST00000560433 CMYA5Q8N3K9 4069 aa7.92□□□□□ -1.14
SNRPA1-211ENST00000560433 SPATA12Q7Z6I5 190 aa7.92□□□□□ -1.14
SNRPA1-211ENST00000560433 ATOH7Q8N100 152 aa7.92□□□□□ -1.14
SNRPA1-211ENST00000560433 NRACQ8N912 160 aa7.92□□□□□ -1.14
SNRPA1-211ENST00000560433 CHCHD1Q96BP2 118 aaKnown RBP7.92□□□□□ -1.14
SNRPA1-211ENST00000560433 A0A096LNJ9 63 aa7.91□□□□□ -1.14
SNRPA1-211ENST00000560433 TCAPO15273 167 aa7.91□□□□□ -1.14
SNRPA1-211ENST00000560433 SMIM17P0DL12 118 aa7.91□□□□□ -1.14
SNRPA1-211ENST00000560433 MED14OSP0DP75 135 aa7.91□□□□□ -1.14
SNRPA1-211ENST00000560433 LINC00315P59091 139 aa7.91□□□□□ -1.14
SNRPA1-211ENST00000560433 NEGR1Q7Z3B1 354 aa7.91□□□□□ -1.14
SNRPA1-211ENST00000560433 RASL10AQ92737 203 aa7.91□□□□□ -1.14
SNRPA1-211ENST00000560433 PRO1933Q9H354 126 aa7.91□□□□□ -1.14
SNRPA1-211ENST00000560433 ZMAT5Q9UDW3 170 aaKnown RBP7.91□□□□□ -1.14
SNRPA1-211ENST00000560433 KIF25-AS1Q9Y6Z4 181 aa7.91□□□□□ -1.14
SNRPA1-211ENST00000560433 LEPROTL1O95214 131 aa7.91□□□□□ -1.14
SNRPA1-211ENST00000560433 MAP1LC3AQ9H492 121 aa7.91□□□□□ -1.14
SNRPA1-211ENST00000560433 TRGV11A0A075B6L2 103 aa7.9□□□□□ -1.14
SNRPA1-211ENST00000560433 NUTF2P61970 127 aaKnown RBP7.9□□□□□ -1.14
SNRPA1-211ENST00000560433 MRPL16Q9NX20 251 aaKnown RBP7.9□□□□□ -1.14
SNRPA1-211ENST00000560433 NXPH4O95158 308 aa7.9□□□□□ -1.15
SNRPA1-211ENST00000560433 PPBPP02775 128 aa7.9□□□□□ -1.15
SNRPA1-211ENST00000560433 ZNF56Q15929 161 aa7.9□□□□□ -1.15
SNRPA1-211ENST00000560433 Q8N976 141 aa7.9□□□□□ -1.15
SNRPA1-211ENST00000560433 PMCHL2Q9BQD1 86 aa7.9□□□□□ -1.15
SNRPA1-211ENST00000560433 CRYGDP07320 174 aa7.89□□□□□ -1.15
SNRPA1-211ENST00000560433 C9orf66Q5T8R8 295 aa7.89□□□□□ -1.15
SNRPA1-211ENST00000560433 SUMO4Q6EEV6 95 aa7.89□□□□□ -1.15
SNRPA1-211ENST00000560433 C11orf72Q8NBR9 251 aa7.89□□□□□ -1.15
SNRPA1-211ENST00000560433 BTF3P20290 206 aaKnown RBP7.89□□□□□ -1.15
SNRPA1-211ENST00000560433 GTSCR1Q86UQ5 136 aa7.89□□□□□ -1.15
SNRPA1-211ENST00000560433 SYT8Q8NBV8 401 aa7.89□□□□□ -1.15
SNRPA1-211ENST00000560433 C18orf15Q96N68 181 aa7.89□□□□□ -1.15
SNRPA1-211ENST00000560433 P0DMU3 169 aa7.88□□□□□ -1.15
SNRPA1-211ENST00000560433 FAM231AP0DMU4 169 aa7.88□□□□□ -1.15
SNRPA1-211ENST00000560433 FAM231CP0DMU5 169 aa7.88□□□□□ -1.15
SNRPA1-211ENST00000560433 MAJINQ3KP22 176 aa7.88□□□□□ -1.15
SNRPA1-211ENST00000560433 OXLD1Q5BKU9 147 aa7.88□□□□□ -1.15
SNRPA1-211ENST00000560433 ZNF664Q8N3J9 261 aa7.88□□□□□ -1.15
SNRPA1-211ENST00000560433 C3orf56Q8N813 242 aa7.88□□□□□ -1.15
SNRPA1-211ENST00000560433 Q9UF83 564 aa7.88□□□□□ -1.15
SNRPA1-211ENST00000560433 IGLV2-18A0A075B6J9 118 aa7.88□□□□□ -1.15
SNRPA1-211ENST00000560433 MRAP2Q96G30 205 aa7.87□□□□□ -1.15
SNRPA1-211ENST00000560433 PAM16Q9Y3D7 125 aa7.87□□□□□ -1.15
SNRPA1-211ENST00000560433 SUMO2P61956 95 aaKnown RBP7.87□□□□□ -1.15
SNRPA1-211ENST00000560433 ZNF415Q09FC8 603 aa7.87□□□□□ -1.15
SNRPA1-211ENST00000560433 M0R2P5 195 aa7.86□□□□□ -1.15
SNRPA1-211ENST00000560433 EMP1P54849 157 aa7.86□□□□□ -1.15
SNRPA1-211ENST00000560433 CMC4P56277 68 aaPredicted RBP7.86□□□□□ -1.15
SNRPA1-211ENST00000560433 S100A12P80511 92 aa7.86□□□□□ -1.15
SNRPA1-211ENST00000560433 Q6ZSN1 163 aa7.86□□□□□ -1.15
SNRPA1-211ENST00000560433 TMEM158Q8WZ71 300 aa7.86□□□□□ -1.15
SNRPA1-211ENST00000560433 CLUHP3Q96NS8 147 aa7.86□□□□□ -1.15
SNRPA1-211ENST00000560433 TRGV1A0A0A0MS02 117 aa7.86□□□□□ -1.15
SNRPA1-211ENST00000560433 IGHV3-53P01767 116 aa7.86□□□□□ -1.15
SNRPA1-211ENST00000560433 INSL3P51460 131 aa7.86□□□□□ -1.15
SNRPA1-211ENST00000560433 MORN3Q6PF18 240 aaPredicted RBP7.86□□□□□ -1.15
SNRPA1-211ENST00000560433 Q8N8P6 123 aa7.86□□□□□ -1.15
SNRPA1-211ENST00000560433 CSNK1G2-AS1Q8NCQ2 148 aa7.86□□□□□ -1.15
SNRPA1-211ENST00000560433 TMEM70Q9BUB7 260 aa7.86□□□□□ -1.15
SNRPA1-211ENST00000560433 NOP10Q9NPE3 64 aaKnown RBP7.86□□□□□ -1.15
SNRPA1-211ENST00000560433 LAMTOR2Q9Y2Q5 125 aa7.86□□□□□ -1.15
SNRPA1-211ENST00000560433 SYS1-DBNDD2H3BUS1 97 aa7.85□□□□□ -1.15
SNRPA1-211ENST00000560433 HBDP02042 147 aa7.85□□□□□ -1.15
SNRPA1-211ENST00000560433 RNASE8Q8TDE3 154 aaKnown RBP7.85□□□□□ -1.15
SNRPA1-211ENST00000560433 FAM110AQ9BQ89 295 aa7.85□□□□□ -1.15
SNRPA1-211ENST00000560433 ZNF747Q9BV97 191 aa7.85□□□□□ -1.15
SNRPA1-211ENST00000560433 SMIM2Q9BVW6 85 aa7.85□□□□□ -1.15
SNRPA1-211ENST00000560433 CSTL1Q9H114 145 aa7.85□□□□□ -1.15
SNRPA1-211ENST00000560433 NXT2Q9NPJ8 142 aaKnown RBP7.85□□□□□ -1.15
SNRPA1-211ENST00000560433 Q6ZTI0 123 aa7.84□□□□□ -1.15
SNRPA1-211ENST00000560433 M0QY20 66 aa7.84□□□□□ -1.15
SNRPA1-211ENST00000560433 CFAP126Q5VTH2 177 aa7.84□□□□□ -1.15
SNRPA1-211ENST00000560433 POM121L12Q8N7R1 296 aa7.84□□□□□ -1.15
SNRPA1-211ENST00000560433 WFDC9Q8NEX5 89 aa7.84□□□□□ -1.15
SNRPA1-211ENST00000560433 C20orf144Q9BQM9 153 aa7.84□□□□□ -1.15
SNRPA1-211ENST00000560433 MAP1LC3CQ9BXW4 147 aa7.84□□□□□ -1.15
SNRPA1-211ENST00000560433 TCTAP57738 103 aa7.83□□□□□ -1.16
SNRPA1-211ENST00000560433 LAGE3Q14657 143 aa7.83□□□□□ -1.16
SNRPA1-211ENST00000560433 C12orf54Q6X4T0 127 aa7.83□□□□□ -1.16
SNRPA1-211ENST00000560433 SDHAF1A6NFY7 115 aa7.83□□□□□ -1.16
SNRPA1-211ENST00000560433 LINC00587B1AMM8 73 aa7.83□□□□□ -1.16
SNRPA1-211ENST00000560433 NUDT3O95989 172 aa7.83□□□□□ -1.16
SNRPA1-211ENST00000560433 TEX43Q6ZNM6 134 aa7.83□□□□□ -1.16
SNRPA1-211ENST00000560433 ST20Q9HBF5 79 aa7.83□□□□□ -1.16
SNRPA1-211ENST00000560433 HSPB8Q9UJY1 196 aa7.83□□□□□ -1.16
SNRPA1-211ENST00000560433 GOLT1BQ9Y3E0 138 aa7.83□□□□□ -1.16
SNRPA1-211ENST00000560433 NOTCH1P46531 2555 aa7.83□□□□□ -1.16
SNRPA1-211ENST00000560433 FCER1GP30273 86 aa7.82□□□□□ -1.16
SNRPA1-211ENST00000560433 RIPPLY3P57055 190 aa7.82□□□□□ -1.16
SNRPA1-211ENST00000560433 TMEM263Q8WUH6 116 aaKnown RBP7.82□□□□□ -1.16
SNRPA1-211ENST00000560433 ZNF479Q96JC4 524 aa7.82□□□□□ -1.16
SNRPA1-211ENST00000560433 PLAC8L1A1L4L8 177 aa7.82□□□□□ -1.16
SNRPA1-211ENST00000560433 DEFB4AO15263 64 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms