RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 CFAP126Q5VTH2 177 aa6.63□□□□□ -1.35
HERC1-206ENST00000559996 GATD1Q8NB37 220 aa6.63□□□□□ -1.35
HERC1-206ENST00000559996 TPPP3Q9BW30 176 aa6.63□□□□□ -1.35
HERC1-206ENST00000559996 PHLDA3Q9Y5J5 127 aa6.63□□□□□ -1.35
HERC1-206ENST00000559996 URGCP-MRPS24S4R325 110 aa6.63□□□□□ -1.35
HERC1-206ENST00000559996 TGIF2-C20orf24A0A0A6YYL0 155 aa6.62□□□□□ -1.35
HERC1-206ENST00000559996 GAGE12BA1L429 117 aa6.62□□□□□ -1.35
HERC1-206ENST00000559996 COLCA2A8K830 154 aa6.62□□□□□ -1.35
HERC1-206ENST00000559996 M0R381 172 aa6.62□□□□□ -1.35
HERC1-206ENST00000559996 GAGE7O76087 117 aa6.62□□□□□ -1.35
HERC1-206ENST00000559996 GAGE12FP0CL80 117 aa6.62□□□□□ -1.35
HERC1-206ENST00000559996 GAGE12GP0CL81 117 aa6.62□□□□□ -1.35
HERC1-206ENST00000559996 GAGE12IP0CL82 117 aa6.62□□□□□ -1.35
HERC1-206ENST00000559996 SPART-AS1P0CW21 52 aa6.62□□□□□ -1.35
HERC1-206ENST00000559996 EVI2AP22794 236 aa6.62□□□□□ -1.35
HERC1-206ENST00000559996 CACNG7P62955 275 aa6.62□□□□□ -1.35
HERC1-206ENST00000559996 SPANXN1Q5VSR9 72 aa6.62□□□□□ -1.35
HERC1-206ENST00000559996 Q6ZSN1 163 aa6.62□□□□□ -1.35
HERC1-206ENST00000559996 ZFP82Q8N141 532 aa6.62□□□□□ -1.35
HERC1-206ENST00000559996 ZNF479Q96JC4 524 aa6.62□□□□□ -1.35
HERC1-206ENST00000559996 NDUFAF3Q9BU61 184 aa6.62□□□□□ -1.35
HERC1-206ENST00000559996 TRBV24-1A0A075B6N3 115 aa6.61□□□□□ -1.35
HERC1-206ENST00000559996 TRAV9-1A0A075B6T8 112 aa6.61□□□□□ -1.35
HERC1-206ENST00000559996 DEFB130BP0DP73 79 aa6.61□□□□□ -1.35
HERC1-206ENST00000559996 DEFB130AP0DP74 79 aa6.61□□□□□ -1.35
HERC1-206ENST00000559996 FHL2Q14192 279 aa6.61□□□□□ -1.35
HERC1-206ENST00000559996 TWIST1Q15672 202 aa6.61□□□□□ -1.35
HERC1-206ENST00000559996 MRPL54Q6P161 138 aaKnown RBP6.61□□□□□ -1.35
HERC1-206ENST00000559996 RNF185Q96GF1 192 aa6.61□□□□□ -1.35
HERC1-206ENST00000559996 BTF3L4Q96K17 158 aa6.61□□□□□ -1.35
HERC1-206ENST00000559996 SMCO4Q9NRQ5 59 aa6.61□□□□□ -1.35
HERC1-206ENST00000559996 U3KQK5 164 aa6.61□□□□□ -1.35
HERC1-206ENST00000559996 A0A087WWL8 130 aa6.6□□□□□ -1.35
HERC1-206ENST00000559996 TRAV4A0A0B4J268 109 aa6.6□□□□□ -1.35
HERC1-206ENST00000559996 GAS8-AS1O95177 125 aa6.6□□□□□ -1.35
HERC1-206ENST00000559996 HOXA5P20719 270 aa6.6□□□□□ -1.35
HERC1-206ENST00000559996 NANOS2P60321 138 aaKnown RBP6.6□□□□□ -1.35
HERC1-206ENST00000559996 RIGQ13278 110 aa6.6□□□□□ -1.35
HERC1-206ENST00000559996 TMEM136Q6ZRR5 245 aa6.6□□□□□ -1.35
HERC1-206ENST00000559996 ATP5L2Q7Z4Y8 100 aa6.6□□□□□ -1.35
HERC1-206ENST00000559996 C14orf178Q8N769 122 aaPredicted RBP6.6□□□□□ -1.35
HERC1-206ENST00000559996 TMEM191AQ9H0A3 160 aa6.6□□□□□ -1.35
HERC1-206ENST00000559996 Q9UF83 564 aa6.6□□□□□ -1.35
HERC1-206ENST00000559996 A8MWV9 139 aa6.59□□□□□ -1.35
HERC1-206ENST00000559996 RAB4AP20338 218 aa6.59□□□□□ -1.35
HERC1-206ENST00000559996 CAMPP49913 170 aa6.59□□□□□ -1.35
HERC1-206ENST00000559996 HBBP68871 147 aa6.59□□□□□ -1.35
HERC1-206ENST00000559996 KCNIP4Q6PIL6 250 aa6.59□□□□□ -1.35
HERC1-206ENST00000559996 Q6ZTC4 211 aa6.59□□□□□ -1.35
HERC1-206ENST00000559996 SYT8Q8NBV8 401 aa6.59□□□□□ -1.35
HERC1-206ENST00000559996 IGHV3-73A0A0B4J1V6 119 aa6.58□□□□□ -1.36
HERC1-206ENST00000559996 A0A1B0GW15 77 aa6.58□□□□□ -1.36
HERC1-206ENST00000559996 PHOX2AO14813 284 aa6.58□□□□□ -1.36
HERC1-206ENST00000559996 IGHV3-53P01767 116 aa6.58□□□□□ -1.36
HERC1-206ENST00000559996 S100PP25815 95 aa6.58□□□□□ -1.36
HERC1-206ENST00000559996 DAD1P61803 113 aa6.58□□□□□ -1.36
HERC1-206ENST00000559996 FAM104BQ5XKR9 115 aa6.58□□□□□ -1.36
HERC1-206ENST00000559996 RASL11AQ6T310 242 aa6.58□□□□□ -1.36
HERC1-206ENST00000559996 ZFP2Q6ZN57 461 aa6.58□□□□□ -1.36
HERC1-206ENST00000559996 AMN1Q8IY45 258 aa6.58□□□□□ -1.36
HERC1-206ENST00000559996 OR4C5Q8NGB2 326 aa6.58□□□□□ -1.36
HERC1-206ENST00000559996 C11orf45Q8TAV5 145 aa6.58□□□□□ -1.36
HERC1-206ENST00000559996 DNAH7Q8WXX0 4024 aa6.58□□□□□ -1.36
HERC1-206ENST00000559996 STAB2Q8WWQ8 2551 aa6.57□□□□□ -1.36
HERC1-206ENST00000559996 TRGV2A0A075B6R0 118 aa6.57□□□□□ -1.36
HERC1-206ENST00000559996 TEX48A0A1B0GUV7 120 aa6.57□□□□□ -1.36
HERC1-206ENST00000559996 TRGC1P0CF51 173 aa6.57□□□□□ -1.36
HERC1-206ENST00000559996 GATA1P15976 413 aaPredicted RBP6.57□□□□□ -1.36
HERC1-206ENST00000559996 SLAQ13239 276 aa6.57□□□□□ -1.36
HERC1-206ENST00000559996 MRPL51Q4U2R6 128 aaKnown RBP6.57□□□□□ -1.36
HERC1-206ENST00000559996 VSIG2Q96IQ7 327 aa6.57□□□□□ -1.36
HERC1-206ENST00000559996 FAM210BQ96KR6 192 aa6.57□□□□□ -1.36
HERC1-206ENST00000559996 GNB1LQ9BYB4 327 aa6.57□□□□□ -1.36
HERC1-206ENST00000559996 DPH3P1Q9H4G8 78 aa6.57□□□□□ -1.36
HERC1-206ENST00000559996 M0QY20 66 aa6.56□□□□□ -1.36
HERC1-206ENST00000559996 CIDEAO60543 219 aa6.56□□□□□ -1.36
HERC1-206ENST00000559996 SLC25A29Q8N8R3 303 aa6.56□□□□□ -1.36
HERC1-206ENST00000559996 BORCS7Q96B45 105 aa6.56□□□□□ -1.36
HERC1-206ENST00000559996 AP1S3Q96PC3 154 aa6.56□□□□□ -1.36
HERC1-206ENST00000559996 CSMD3Q7Z407 3707 aa6.56□□□□□ -1.36
HERC1-206ENST00000559996 TRAV26-2A0A0B4J265 109 aa6.55□□□□□ -1.36
HERC1-206ENST00000559996 ATP5G1P05496 136 aa6.55□□□□□ -1.36
HERC1-206ENST00000559996 P0DMU3 169 aa6.55□□□□□ -1.36
HERC1-206ENST00000559996 FAM231AP0DMU4 169 aa6.55□□□□□ -1.36
HERC1-206ENST00000559996 FAM231CP0DMU5 169 aa6.55□□□□□ -1.36
HERC1-206ENST00000559996 CRYBA4P53673 196 aa6.55□□□□□ -1.36
HERC1-206ENST00000559996 RAB4BP61018 213 aa6.55□□□□□ -1.36
HERC1-206ENST00000559996 FAM74A4Q5TZK3 123 aa6.55□□□□□ -1.36
HERC1-206ENST00000559996 SUMO4Q6EEV6 95 aa6.55□□□□□ -1.36
HERC1-206ENST00000559996 LOC100131303A0A0U1RQF7 123 aa6.54□□□□□ -1.36
HERC1-206ENST00000559996 TRBV6-4A0A1B0GX49 114 aa6.54□□□□□ -1.36
HERC1-206ENST00000559996 SMKR1H3BMG3 65 aa6.54□□□□□ -1.36
HERC1-206ENST00000559996 RHODO00212 210 aa6.54□□□□□ -1.36
HERC1-206ENST00000559996 RAB5AP20339 215 aa6.54□□□□□ -1.36
HERC1-206ENST00000559996 RPS10P46783 165 aaKnown RBP6.54□□□□□ -1.36
HERC1-206ENST00000559996 KIAA1644Q3SXP7 199 aa6.54□□□□□ -1.36
HERC1-206ENST00000559996 NRACQ8N912 160 aa6.54□□□□□ -1.36
HERC1-206ENST00000559996 FRZBQ92765 325 aa6.54□□□□□ -1.36
HERC1-206ENST00000559996 HHLA3Q9XRX5 114 aa6.54□□□□□ -1.36
HERC1-206ENST00000559996 TGP01266 2768 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms