RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 MRPL51Q4U2R6 128 aaKnown RBP8.72□□□□□ -1.01
HERC1-205ENST00000559886 SAMD10Q9BYL1 202 aa8.72□□□□□ -1.01
HERC1-205ENST00000559886 A0A087WWL8 130 aa8.71□□□□□ -1.01
HERC1-205ENST00000559886 CFAP126Q5VTH2 177 aa8.71□□□□□ -1.02
HERC1-205ENST00000559886 POM121L12Q8N7R1 296 aa8.71□□□□□ -1.02
HERC1-205ENST00000559886 TM2D3Q9BRN9 247 aa8.71□□□□□ -1.02
HERC1-205ENST00000559886 RS1O15537 224 aa8.7□□□□□ -1.02
HERC1-205ENST00000559886 RAB5BP61020 215 aa8.7□□□□□ -1.02
HERC1-205ENST00000559886 UFSP1Q6NVU6 142 aa8.7□□□□□ -1.02
HERC1-205ENST00000559886 MRAPQ8TCY5 172 aa8.7□□□□□ -1.02
HERC1-205ENST00000559886 DEFB4AO15263 64 aa8.7□□□□□ -1.02
HERC1-205ENST00000559886 HIST1H2BKO60814 126 aa8.7□□□□□ -1.02
HERC1-205ENST00000559886 HIST1H2BJP06899 126 aa8.7□□□□□ -1.02
HERC1-205ENST00000559886 HIST1H2BOP23527 126 aa8.7□□□□□ -1.02
HERC1-205ENST00000559886 HIST1H2BBP33778 126 aa8.7□□□□□ -1.02
HERC1-205ENST00000559886 HIST1H2BDP58876 126 aa8.7□□□□□ -1.02
HERC1-205ENST00000559886 HIST1H2BCP62807 126 aa8.7□□□□□ -1.02
HERC1-205ENST00000559886 HIST2H2BEQ16778 126 aa8.7□□□□□ -1.02
HERC1-205ENST00000559886 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.7□□□□□ -1.02
HERC1-205ENST00000559886 FAM74A4Q5TZK3 123 aa8.7□□□□□ -1.02
HERC1-205ENST00000559886 LINC00612Q8N6U2 182 aa8.7□□□□□ -1.02
HERC1-205ENST00000559886 HIST1H2BHQ93079 126 aa8.7□□□□□ -1.02
HERC1-205ENST00000559886 HIST1H2BNQ99877 126 aa8.7□□□□□ -1.02
HERC1-205ENST00000559886 HIST1H2BMQ99879 126 aa8.7□□□□□ -1.02
HERC1-205ENST00000559886 SPATA25Q9BR10 227 aa8.7□□□□□ -1.02
HERC1-205ENST00000559886 U3KQK5 164 aa8.7□□□□□ -1.02
HERC1-205ENST00000559886 LYRM9A8MSI8 78 aa8.69□□□□□ -1.02
HERC1-205ENST00000559886 ALKBH7Q9BT30 221 aaPredicted RBP8.69□□□□□ -1.02
HERC1-205ENST00000559886 GAGE12BA1L429 117 aa8.69□□□□□ -1.02
HERC1-205ENST00000559886 D6R8Y8 96 aa8.69□□□□□ -1.02
HERC1-205ENST00000559886 GAGE7O76087 117 aa8.69□□□□□ -1.02
HERC1-205ENST00000559886 PPBPP02775 128 aa8.69□□□□□ -1.02
HERC1-205ENST00000559886 MGPP08493 103 aa8.69□□□□□ -1.02
HERC1-205ENST00000559886 GAGE12FP0CL80 117 aa8.69□□□□□ -1.02
HERC1-205ENST00000559886 GAGE12GP0CL81 117 aa8.69□□□□□ -1.02
HERC1-205ENST00000559886 GAGE12IP0CL82 117 aa8.69□□□□□ -1.02
HERC1-205ENST00000559886 SRIP30626 198 aa8.69□□□□□ -1.02
HERC1-205ENST00000559886 CKS2P33552 79 aa8.69□□□□□ -1.02
HERC1-205ENST00000559886 FAM222AQ5U5X8 452 aa8.69□□□□□ -1.02
HERC1-205ENST00000559886 ORMDL3Q8N138 153 aa8.69□□□□□ -1.02
HERC1-205ENST00000559886 MRAP2Q96G30 205 aa8.69□□□□□ -1.02
HERC1-205ENST00000559886 DKK2Q9UBU2 259 aa8.69□□□□□ -1.02
HERC1-205ENST00000559886 TMA7Q9Y2S6 64 aaKnown RBP8.69□□□□□ -1.02
HERC1-205ENST00000559886 TENM3Q9P273 2699 aa8.68□□□□□ -1.02
HERC1-205ENST00000559886 TRAV4A0A0B4J268 109 aa8.68□□□□□ -1.02
HERC1-205ENST00000559886 RHODO00212 210 aa8.68□□□□□ -1.02
HERC1-205ENST00000559886 ZFP2Q6ZN57 461 aa8.68□□□□□ -1.02
HERC1-205ENST00000559886 OR4C5Q8NGB2 326 aa8.68□□□□□ -1.02
HERC1-205ENST00000559886 HUWE1Q7Z6Z7 4374 aaKnown RBP8.68□□□□□ -1.02
HERC1-205ENST00000559886 TRGV2A0A075B6R0 118 aa8.68□□□□□ -1.02
HERC1-205ENST00000559886 TRAV26-2A0A0B4J265 109 aa8.68□□□□□ -1.02
HERC1-205ENST00000559886 SMKR1H3BMG3 65 aa8.68□□□□□ -1.02
HERC1-205ENST00000559886 C18orf15Q96N68 181 aa8.68□□□□□ -1.02
HERC1-205ENST00000559886 F5H697 171 aa8.67□□□□□ -1.02
HERC1-205ENST00000559886 GAS8-AS1O95177 125 aa8.67□□□□□ -1.02
HERC1-205ENST00000559886 NCR2O95944 276 aa8.67□□□□□ -1.02
HERC1-205ENST00000559886 ZNF56Q15929 161 aa8.66□□□□□ -1.02
HERC1-205ENST00000559886 ZNF479Q96JC4 524 aa8.66□□□□□ -1.02
HERC1-205ENST00000559886 PRELID3AQ96N28 172 aa8.66□□□□□ -1.02
HERC1-205ENST00000559886 C11orf68Q9H3H3 251 aaKnown RBP8.66□□□□□ -1.02
HERC1-205ENST00000559886 DNAH9Q9NYC9 4486 aa8.66□□□□□ -1.02
HERC1-205ENST00000559886 IGHV3-73A0A0B4J1V6 119 aa8.66□□□□□ -1.02
HERC1-205ENST00000559886 SPART-AS1P0CW21 52 aa8.66□□□□□ -1.02
HERC1-205ENST00000559886 DEFB130BP0DP73 79 aa8.66□□□□□ -1.02
HERC1-205ENST00000559886 DEFB130AP0DP74 79 aa8.66□□□□□ -1.02
HERC1-205ENST00000559886 GATA1P15976 413 aaPredicted RBP8.66□□□□□ -1.02
HERC1-205ENST00000559886 SUMO4Q6EEV6 95 aa8.66□□□□□ -1.02
HERC1-205ENST00000559886 B9D2Q9BPU9 175 aa8.66□□□□□ -1.02
HERC1-205ENST00000559886 CELA1Q9UNI1 258 aa8.66□□□□□ -1.02
HERC1-205ENST00000559886 CIDEAO60543 219 aa8.65□□□□□ -1.02
HERC1-205ENST00000559886 NRACQ8N912 160 aa8.65□□□□□ -1.02
HERC1-205ENST00000559886 C18orf32Q8TCD1 76 aa8.65□□□□□ -1.02
HERC1-205ENST00000559886 LAMTOR2Q9Y2Q5 125 aa8.65□□□□□ -1.02
HERC1-205ENST00000559886 M0QY20 66 aa8.65□□□□□ -1.02
HERC1-205ENST00000559886 NPYP01303 97 aa8.65□□□□□ -1.02
HERC1-205ENST00000559886 Q0VG73 95 aa8.65□□□□□ -1.02
HERC1-205ENST00000559886 OR10J3Q5JRS4 329 aa8.65□□□□□ -1.02
HERC1-205ENST00000559886 EDA2RQ9HAV5 297 aa8.65□□□□□ -1.02
HERC1-205ENST00000559886 TEX48A0A1B0GUV7 120 aa8.64□□□□□ -1.03
HERC1-205ENST00000559886 IGHV3-53P01767 116 aa8.64□□□□□ -1.03
HERC1-205ENST00000559886 DEFA6Q01524 100 aa8.64□□□□□ -1.03
HERC1-205ENST00000559886 Q6ZSN1 163 aa8.64□□□□□ -1.03
HERC1-205ENST00000559886 ZMAT4Q9H898 229 aa8.64□□□□□ -1.03
HERC1-205ENST00000559886 TNFRSF6BO95407 300 aa8.64□□□□□ -1.03
HERC1-205ENST00000559886 DAD1P61803 113 aa8.63□□□□□ -1.03
HERC1-205ENST00000559886 RPL39LQ96EH5 51 aaKnown RBP8.63□□□□□ -1.03
HERC1-205ENST00000559886 A0A0J9YWU9 116 aa8.63□□□□□ -1.03
HERC1-205ENST00000559886 H7C1H1 209 aa8.63□□□□□ -1.03
HERC1-205ENST00000559886 PPP1R17O96001 155 aa8.63□□□□□ -1.03
HERC1-205ENST00000559886 NDUFA6P56556 154 aa8.62□□□□□ -1.03
HERC1-205ENST00000559886 IQCJQ1A5X6 159 aa8.62□□□□□ -1.03
HERC1-205ENST00000559886 COA6Q5JTJ3 125 aaKnown RBP8.62□□□□□ -1.03
HERC1-205ENST00000559886 PRKDCP78527 4128 aaKnown RBP8.62□□□□□ -1.03
HERC1-205ENST00000559886 MEGF8Q7Z7M0 2845 aa8.62□□□□□ -1.03
HERC1-205ENST00000559886 FHL2Q14192 279 aa8.62□□□□□ -1.03
HERC1-205ENST00000559886 NIT2Q9NQR4 276 aa8.62□□□□□ -1.03
HERC1-205ENST00000559886 PRSS47A8MTI9 375 aa8.61□□□□□ -1.03
HERC1-205ENST00000559886 S100A6P06703 90 aa8.61□□□□□ -1.03
HERC1-205ENST00000559886 BAGE3Q86Y29 109 aa8.61□□□□□ -1.03
HERC1-205ENST00000559886 C20orf78Q9BR46 151 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms