RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 CRIP1P50238 77 aa9.74□□□□□ -0.85
SHMT2-235ENST00000557740 RGS21Q2M5E4 152 aa9.74□□□□□ -0.85
SHMT2-235ENST00000557740 COX8CQ7Z4L0 72 aa9.74□□□□□ -0.85
SHMT2-235ENST00000557740 URGCP-MRPS24S4R325 110 aa9.74□□□□□ -0.85
SHMT2-235ENST00000557740 A0A087WWL8 130 aa9.73□□□□□ -0.85
SHMT2-235ENST00000557740 TMSB15BA0A087X1C1 80 aa9.73□□□□□ -0.85
SHMT2-235ENST00000557740 G3V3Q6 166 aa9.73□□□□□ -0.85
SHMT2-235ENST00000557740 M0R381 172 aa9.73□□□□□ -0.85
SHMT2-235ENST00000557740 LTAP01374 205 aa9.73□□□□□ -0.85
SHMT2-235ENST00000557740 LINC01559Q495D7 138 aa9.73□□□□□ -0.85
SHMT2-235ENST00000557740 DAZ4Q86SG3 579 aaKnown RBP9.73□□□□□ -0.85
SHMT2-235ENST00000557740 ZFP82Q8N141 532 aa9.73□□□□□ -0.85
SHMT2-235ENST00000557740 DAZ3Q9NR90 486 aaKnown RBP9.73□□□□□ -0.85
SHMT2-235ENST00000557740 CYTL1Q9NRR1 136 aa9.73□□□□□ -0.85
SHMT2-235ENST00000557740 Q9UF83 564 aa9.73□□□□□ -0.85
SHMT2-235ENST00000557740 TRBV6-1A0A0K0K1D8 114 aa9.72□□□□□ -0.85
SHMT2-235ENST00000557740 SEC11BP0C7V7 166 aa9.72□□□□□ -0.85
SHMT2-235ENST00000557740 WFDC2Q14508 124 aa9.72□□□□□ -0.85
SHMT2-235ENST00000557740 ZNF674Q2M3X9 581 aa9.72□□□□□ -0.85
SHMT2-235ENST00000557740 RMI2Q96E14 147 aa9.72□□□□□ -0.85
SHMT2-235ENST00000557740 SFRP2Q96HF1 295 aa9.72□□□□□ -0.85
SHMT2-235ENST00000557740 COX11Q9Y6N1 276 aa9.72□□□□□ -0.85
SHMT2-235ENST00000557740 LECT2O14960 151 aa9.71□□□□□ -0.86
SHMT2-235ENST00000557740 SMLR1H3BR10 107 aa9.7□□□□□ -0.86
SHMT2-235ENST00000557740 PAGE4O60829 102 aa9.7□□□□□ -0.86
SHMT2-235ENST00000557740 C1QBP02746 253 aa9.7□□□□□ -0.86
SHMT2-235ENST00000557740 RPL36AP83881 106 aaKnown RBP9.7□□□□□ -0.86
SHMT2-235ENST00000557740 KCNIP4Q6PIL6 250 aa9.7□□□□□ -0.86
SHMT2-235ENST00000557740 NIT1Q86X76 327 aa9.7□□□□□ -0.86
SHMT2-235ENST00000557740 FAM213BQ8TBF2 198 aa9.7□□□□□ -0.86
SHMT2-235ENST00000557740 SFT2D1Q8WV19 159 aa9.7□□□□□ -0.86
SHMT2-235ENST00000557740 RPL36ALQ969Q0 106 aaKnown RBP9.7□□□□□ -0.86
SHMT2-235ENST00000557740 FLG2Q5D862 2391 aaPredicted RBP9.7□□□□□ -0.86
SHMT2-235ENST00000557740 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-235ENST00000557740 TRBV10-1A0A0K0K1A3 114 aa9.69□□□□□ -0.86
SHMT2-235ENST00000557740 PFDN1O60925 122 aa9.69□□□□□ -0.86
SHMT2-235ENST00000557740 ZNF345Q14585 488 aa9.69□□□□□ -0.86
SHMT2-235ENST00000557740 IGKV2D-24A0A075B6R9 120 aa9.68□□□□□ -0.86
SHMT2-235ENST00000557740 A0A087WX48 190 aa9.68□□□□□ -0.86
SHMT2-235ENST00000557740 A0A1B0GV50 99 aa9.68□□□□□ -0.86
SHMT2-235ENST00000557740 UMAD1C9J7I0 102 aa9.68□□□□□ -0.86
SHMT2-235ENST00000557740 S100A9P06702 114 aaKnown RBP9.68□□□□□ -0.86
SHMT2-235ENST00000557740 KCNRGQ8N5I3 272 aa9.68□□□□□ -0.86
SHMT2-235ENST00000557740 BAALCQ8WXS3 180 aa9.68□□□□□ -0.86
SHMT2-235ENST00000557740 CHCHD7Q9BUK0 85 aa9.68□□□□□ -0.86
SHMT2-235ENST00000557740 FAM30AQ9NZY2 134 aa9.68□□□□□ -0.86
SHMT2-235ENST00000557740 KLK12Q9UKR0 248 aa9.68□□□□□ -0.86
SHMT2-235ENST00000557740 SCO2A0A1W2PP80 73 aa9.67□□□□□ -0.86
SHMT2-235ENST00000557740 ELOBQ15370 118 aa9.67□□□□□ -0.86
SHMT2-235ENST00000557740 ZNF56Q15929 161 aa9.67□□□□□ -0.86
SHMT2-235ENST00000557740 ZNF471Q9BX82 626 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-235ENST00000557740 VPS13BQ7Z7G8 4022 aa9.66□□□□□ -0.86
SHMT2-235ENST00000557740 TRBV7-3A0A075B6L6 115 aa9.66□□□□□ -0.86
SHMT2-235ENST00000557740 UBE2D3P61077 147 aa9.66□□□□□ -0.86
SHMT2-235ENST00000557740 UBE2D2P62837 147 aa9.66□□□□□ -0.86
SHMT2-235ENST00000557740 RPL19P84098 196 aaKnown RBP9.66□□□□□ -0.86
SHMT2-235ENST00000557740 BAGE2Q86Y30 109 aa9.66□□□□□ -0.86
SHMT2-235ENST00000557740 OR10AG1Q8NH19 301 aa9.66□□□□□ -0.86
SHMT2-235ENST00000557740 MBD3L1Q8WWY6 194 aa9.66□□□□□ -0.86
SHMT2-235ENST00000557740 UBE2WQ96B02 151 aa9.66□□□□□ -0.86
SHMT2-235ENST00000557740 SRRM2Q9UQ35 2752 aaKnown RBP9.66□□□□□ -0.86
SHMT2-235ENST00000557740 FAT1Q14517 4588 aa9.65□□□□□ -0.86
SHMT2-235ENST00000557740 KANTRA0A1W2PQU2 76 aa9.65□□□□□ -0.86
SHMT2-235ENST00000557740 BCL2L11O43521 198 aa9.65□□□□□ -0.86
SHMT2-235ENST00000557740 CXCL1P09341 107 aa9.65□□□□□ -0.86
SHMT2-235ENST00000557740 RAB4BP61018 213 aa9.65□□□□□ -0.86
SHMT2-235ENST00000557740 PRR27Q6MZM9 219 aa9.65□□□□□ -0.86
SHMT2-235ENST00000557740 Q8N976 141 aa9.65□□□□□ -0.86
SHMT2-235ENST00000557740 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.65□□□□□ -0.86
SHMT2-235ENST00000557740 HERC1Q15751 4861 aa9.64□□□□□ -0.87
SHMT2-235ENST00000557740 A0A0D9SG52 128 aa9.64□□□□□ -0.87
SHMT2-235ENST00000557740 RBFOX3A6NFN3 312 aa9.64□□□□□ -0.87
SHMT2-235ENST00000557740 PLA2G1BP04054 148 aaKnown RBP9.64□□□□□ -0.87
SHMT2-235ENST00000557740 H2AFB1P0C5Y9 115 aa9.64□□□□□ -0.87
SHMT2-235ENST00000557740 EIF5AP63241 154 aaKnown RBP9.64□□□□□ -0.87
SHMT2-235ENST00000557740 SPANXN1Q5VSR9 72 aa9.64□□□□□ -0.87
SHMT2-235ENST00000557740 Q6ZSA8 131 aa9.64□□□□□ -0.87
SHMT2-235ENST00000557740 OR10G8Q8NGN5 311 aa9.64□□□□□ -0.87
SHMT2-235ENST00000557740 DNAJC30Q96LL9 226 aa9.64□□□□□ -0.87
SHMT2-235ENST00000557740 TMEM262E9PQX1 116 aa9.63□□□□□ -0.87
SHMT2-235ENST00000557740 CRPP02741 224 aa9.63□□□□□ -0.87
SHMT2-235ENST00000557740 Q0VG73 95 aa9.63□□□□□ -0.87
SHMT2-235ENST00000557740 NEXN-AS1Q8NBZ9 246 aa9.63□□□□□ -0.87
SHMT2-235ENST00000557740 TRBV6-8A0A0A6YYG3 113 aa9.62□□□□□ -0.87
SHMT2-235ENST00000557740 MUC21A0A0G2JKD1 596 aa9.62□□□□□ -0.87
SHMT2-235ENST00000557740 MUC21A0A140T8X8 626 aa9.62□□□□□ -0.87
SHMT2-235ENST00000557740 HMSDA8MTL9 139 aa9.62□□□□□ -0.87
SHMT2-235ENST00000557740 F5H697 171 aa9.62□□□□□ -0.87
SHMT2-235ENST00000557740 SNAI2O43623 268 aa9.62□□□□□ -0.87
SHMT2-235ENST00000557740 LINC01620Q4KN68 170 aa9.62□□□□□ -0.87
SHMT2-235ENST00000557740 LINC00528Q8N1L1 170 aa9.62□□□□□ -0.87
SHMT2-235ENST00000557740 C15orf54Q8N8G6 183 aa9.62□□□□□ -0.87
SHMT2-235ENST00000557740 MLST8Q9BVC4 326 aa9.62□□□□□ -0.87
SHMT2-235ENST00000557740 C1orf43Q9BWL3 253 aa9.62□□□□□ -0.87
SHMT2-235ENST00000557740 MYCBP2O75592 4640 aa9.61□□□□□ -0.87
SHMT2-235ENST00000557740 OR5AL1P0C617 328 aa9.61□□□□□ -0.87
SHMT2-235ENST00000557740 SMIM17P0DL12 118 aa9.61□□□□□ -0.87
SHMT2-235ENST00000557740 PKIAP61925 76 aa9.61□□□□□ -0.87
SHMT2-235ENST00000557740 ATRAIDQ6UW56 229 aa9.61□□□□□ -0.87
SHMT2-235ENST00000557740 TMUB2Q71RG4 321 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 400.3 ms