RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 DEFB121Q5J5C9 76 aa7.37□□□□□ -1.23
SRP54-208ENST00000555557 TMEM136Q6ZRR5 245 aa7.37□□□□□ -1.23
SRP54-208ENST00000555557 ATP5L2Q7Z4Y8 100 aa7.37□□□□□ -1.23
SRP54-208ENST00000555557 RNASE8Q8TDE3 154 aaKnown RBP7.37□□□□□ -1.23
SRP54-208ENST00000555557 CNFNQ9BYD5 112 aa7.37□□□□□ -1.23
SRP54-208ENST00000555557 MED14OSP0DP75 135 aa7.36□□□□□ -1.23
SRP54-208ENST00000555557 RRN3P1Q2M238 152 aa7.36□□□□□ -1.23
SRP54-208ENST00000555557 RCHY1Q96PM5 261 aa7.36□□□□□ -1.23
SRP54-208ENST00000555557 JPT2Q9H910 190 aa7.36□□□□□ -1.23
SRP54-208ENST00000555557 X6R8D5 127 aa7.36□□□□□ -1.23
SRP54-208ENST00000555557 MUC4Q99102 2169 aa7.36□□□□□ -1.23
SRP54-208ENST00000555557 EVI2AP22794 236 aa7.35□□□□□ -1.23
SRP54-208ENST00000555557 EMP1P54849 157 aa7.35□□□□□ -1.23
SRP54-208ENST00000555557 ZNF415Q09FC8 603 aa7.35□□□□□ -1.23
SRP54-208ENST00000555557 OR11H2Q8NH07 326 aa7.35□□□□□ -1.23
SRP54-208ENST00000555557 TMEM263Q8WUH6 116 aaKnown RBP7.35□□□□□ -1.23
SRP54-208ENST00000555557 TRAPPC1Q9Y5R8 145 aa7.35□□□□□ -1.23
SRP54-208ENST00000555557 IGHV4-4A0A075B6R2 117 aa7.35□□□□□ -1.23
SRP54-208ENST00000555557 PLAC8L1A1L4L8 177 aa7.35□□□□□ -1.23
SRP54-208ENST00000555557 CACNG7P62955 275 aa7.35□□□□□ -1.23
SRP54-208ENST00000555557 KIAA1644Q3SXP7 199 aa7.35□□□□□ -1.23
SRP54-208ENST00000555557 ZNF876PQ49A33 203 aa7.35□□□□□ -1.23
SRP54-208ENST00000555557 MRAPQ8TCY5 172 aa7.35□□□□□ -1.23
SRP54-208ENST00000555557 GNB1LQ9BYB4 327 aa7.35□□□□□ -1.23
SRP54-208ENST00000555557 RETNQ9HD89 108 aa7.35□□□□□ -1.23
SRP54-208ENST00000555557 DEFB4AO15263 64 aa7.34□□□□□ -1.23
SRP54-208ENST00000555557 SLAQ13239 276 aa7.34□□□□□ -1.23
SRP54-208ENST00000555557 WDR73Q6P4I2 378 aa7.34□□□□□ -1.23
SRP54-208ENST00000555557 RASL11AQ6T310 242 aa7.34□□□□□ -1.23
SRP54-208ENST00000555557 Q6ZWC4 215 aa7.34□□□□□ -1.23
SRP54-208ENST00000555557 SBSPONQ8IVN8 264 aa7.34□□□□□ -1.23
SRP54-208ENST00000555557 RNF183Q96D59 192 aa7.34□□□□□ -1.23
SRP54-208ENST00000555557 MRPL18Q9H0U6 180 aaKnown RBP7.34□□□□□ -1.23
SRP54-208ENST00000555557 NOP10Q9NPE3 64 aaKnown RBP7.34□□□□□ -1.23
SRP54-208ENST00000555557 MRPL16Q9NX20 251 aaKnown RBP7.34□□□□□ -1.23
SRP54-208ENST00000555557 C20orf202A1L168 122 aa7.33□□□□□ -1.24
SRP54-208ENST00000555557 M0R2P5 195 aa7.33□□□□□ -1.24
SRP54-208ENST00000555557 TEX43Q6ZNM6 134 aa7.33□□□□□ -1.24
SRP54-208ENST00000555557 AMN1Q8IY45 258 aa7.33□□□□□ -1.24
SRP54-208ENST00000555557 C14orf178Q8N769 122 aaPredicted RBP7.33□□□□□ -1.24
SRP54-208ENST00000555557 C16orf74Q96GX8 76 aa7.33□□□□□ -1.24
SRP54-208ENST00000555557 OVOL2Q9BRP0 275 aa7.33□□□□□ -1.24
SRP54-208ENST00000555557 A0A087WWL8 130 aa7.33□□□□□ -1.24
SRP54-208ENST00000555557 A0A1B0GW15 77 aa7.33□□□□□ -1.24
SRP54-208ENST00000555557 NXPH4O95158 308 aa7.33□□□□□ -1.24
SRP54-208ENST00000555557 APCSP02743 223 aa7.33□□□□□ -1.24
SRP54-208ENST00000555557 RBX1P62877 108 aa7.33□□□□□ -1.24
SRP54-208ENST00000555557 IL17DQ8TAD2 202 aa7.33□□□□□ -1.24
SRP54-208ENST00000555557 ORAOV1Q8WV07 137 aa7.33□□□□□ -1.24
SRP54-208ENST00000555557 SAMD10Q9BYL1 202 aa7.33□□□□□ -1.24
SRP54-208ENST00000555557 TRGV1A0A0A0MS02 117 aa7.32□□□□□ -1.24
SRP54-208ENST00000555557 K7EP13 123 aa7.32□□□□□ -1.24
SRP54-208ENST00000555557 HLA-DQA1P01909 254 aa7.32□□□□□ -1.24
SRP54-208ENST00000555557 BATFQ16520 125 aa7.32□□□□□ -1.24
SRP54-208ENST00000555557 ZNF493Q6ZR52 646 aa7.32□□□□□ -1.24
SRP54-208ENST00000555557 Q6ZTI0 123 aa7.32□□□□□ -1.24
SRP54-208ENST00000555557 SYT8Q8NBV8 401 aa7.32□□□□□ -1.24
SRP54-208ENST00000555557 SPXQ9BT56 116 aa7.32□□□□□ -1.24
SRP54-208ENST00000555557 VAMP8Q9BV40 100 aa7.32□□□□□ -1.24
SRP54-208ENST00000555557 TMEM191AQ9H0A3 160 aa7.32□□□□□ -1.24
SRP54-208ENST00000555557 IGHV4-28A0A0C4DH34 117 aa7.31□□□□□ -1.24
SRP54-208ENST00000555557 SMIM9A6NGZ8 99 aa7.31□□□□□ -1.24
SRP54-208ENST00000555557 MT-ND6P03923 174 aa7.31□□□□□ -1.24
SRP54-208ENST00000555557 COX19Q49B96 90 aa7.31□□□□□ -1.24
SRP54-208ENST00000555557 FAM104BQ5XKR9 115 aa7.31□□□□□ -1.24
SRP54-208ENST00000555557 GATD1Q8NB37 220 aa7.31□□□□□ -1.24
SRP54-208ENST00000555557 RNF185Q96GF1 192 aa7.31□□□□□ -1.24
SRP54-208ENST00000555557 PTTG1IPP53801 180 aa7.31□□□□□ -1.24
SRP54-208ENST00000555557 DAZ2Q13117 558 aaKnown RBP7.31□□□□□ -1.24
SRP54-208ENST00000555557 FAM74A4Q5TZK3 123 aa7.31□□□□□ -1.24
SRP54-208ENST00000555557 SMIM15Q7Z3B0 74 aa7.31□□□□□ -1.24
SRP54-208ENST00000555557 RASL10AQ92737 203 aa7.31□□□□□ -1.24
SRP54-208ENST00000555557 AP1S3Q96PC3 154 aa7.31□□□□□ -1.24
SRP54-208ENST00000555557 PRKDCP78527 4128 aaKnown RBP7.3□□□□□ -1.24
SRP54-208ENST00000555557 IGHV3-73A0A0B4J1V6 119 aa7.3□□□□□ -1.24
SRP54-208ENST00000555557 TRAV26-2A0A0B4J265 109 aa7.3□□□□□ -1.24
SRP54-208ENST00000555557 SMKR1H3BMG3 65 aa7.3□□□□□ -1.24
SRP54-208ENST00000555557 GAS8-AS1O95177 125 aa7.3□□□□□ -1.24
SRP54-208ENST00000555557 CRYGDP07320 174 aa7.3□□□□□ -1.24
SRP54-208ENST00000555557 MGPP08493 103 aa7.3□□□□□ -1.24
SRP54-208ENST00000555557 MRPL51Q4U2R6 128 aaKnown RBP7.3□□□□□ -1.24
SRP54-208ENST00000555557 Q8NAQ8 132 aa7.3□□□□□ -1.24
SRP54-208ENST00000555557 KIF25-AS1Q9Y6Z4 181 aa7.3□□□□□ -1.24
SRP54-208ENST00000555557 HUWE1Q7Z6Z7 4374 aaKnown RBP7.29□□□□□ -1.24
SRP54-208ENST00000555557 MEGF8Q7Z7M0 2845 aa7.29□□□□□ -1.24
SRP54-208ENST00000555557 GAGE12BA1L429 117 aa7.29□□□□□ -1.24
SRP54-208ENST00000555557 GAGE7O76087 117 aa7.29□□□□□ -1.24
SRP54-208ENST00000555557 GAGE12FP0CL80 117 aa7.29□□□□□ -1.24
SRP54-208ENST00000555557 GAGE12GP0CL81 117 aa7.29□□□□□ -1.24
SRP54-208ENST00000555557 GAGE12IP0CL82 117 aa7.29□□□□□ -1.24
SRP54-208ENST00000555557 ESDP10768 282 aa7.29□□□□□ -1.24
SRP54-208ENST00000555557 MIFP14174 115 aa7.29□□□□□ -1.24
SRP54-208ENST00000555557 LINC00315P59091 139 aa7.29□□□□□ -1.24
SRP54-208ENST00000555557 POM121L12Q8N7R1 296 aa7.29□□□□□ -1.24
SRP54-208ENST00000555557 DPH3P1Q9H4G8 78 aa7.29□□□□□ -1.24
SRP54-208ENST00000555557 D6R8Y8 96 aa7.29□□□□□ -1.24
SRP54-208ENST00000555557 NCR2O95944 276 aa7.29□□□□□ -1.24
SRP54-208ENST00000555557 IGHV3-53P01767 116 aa7.29□□□□□ -1.24
SRP54-208ENST00000555557 SMIM17P0DL12 118 aa7.29□□□□□ -1.24
SRP54-208ENST00000555557 GATA1P15976 413 aaPredicted RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms