RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 TOMM6Q96B49 74 aa10.8□□□□□ -0.68
VTI1B-204ENST00000554659 ETDCA0A1B0GVM5 59 aa10.8□□□□□ -0.68
VTI1B-204ENST00000554659 P0C879 139 aa10.8□□□□□ -0.68
VTI1B-204ENST00000554659 HIST2H2BCQ6DN03 193 aa10.8□□□□□ -0.68
VTI1B-204ENST00000554659 EML6Q6ZMW3 1958 aa10.8□□□□□ -0.68
VTI1B-204ENST00000554659 MP68P56378 58 aa10.8□□□□□ -0.68
VTI1B-204ENST00000554659 Q8N9W7 124 aa10.8□□□□□ -0.68
VTI1B-204ENST00000554659 AJUBAQ96IF1 538 aa10.8□□□□□ -0.68
VTI1B-204ENST00000554659 C19orf71A6NCJ1 209 aa10.79□□□□□ -0.68
VTI1B-204ENST00000554659 GRNP28799 593 aaKnown RBP10.79□□□□□ -0.68
VTI1B-204ENST00000554659 IGLV1-47P01700 117 aa10.79□□□□□ -0.68
VTI1B-204ENST00000554659 MRPL23Q16540 153 aaKnown RBP10.79□□□□□ -0.68
VTI1B-204ENST00000554659 OPRPNQ99935 248 aaPredicted RBP10.79□□□□□ -0.68
VTI1B-204ENST00000554659 E9PLD3 99 aa10.79□□□□□ -0.68
VTI1B-204ENST00000554659 Q9HAA7 133 aa10.79□□□□□ -0.68
VTI1B-204ENST00000554659 NACAE9PAV3 2078 aa10.79□□□□□ -0.68
VTI1B-204ENST00000554659 TNCP24821 2201 aa10.78□□□□□ -0.68
VTI1B-204ENST00000554659 TIMM17AQ99595 171 aa10.78□□□□□ -0.68
VTI1B-204ENST00000554659 PRAC2D3DTV9 90 aa10.78□□□□□ -0.68
VTI1B-204ENST00000554659 FRMD6-AS1P0C7T7 363 aa10.78□□□□□ -0.68
VTI1B-204ENST00000554659 FOXI1Q12951 378 aa10.78□□□□□ -0.68
VTI1B-204ENST00000554659 NREPQ16612 68 aa10.78□□□□□ -0.68
VTI1B-204ENST00000554659 DAND5Q8N907 189 aa10.78□□□□□ -0.68
VTI1B-204ENST00000554659 BAALCQ8WXS3 180 aa10.78□□□□□ -0.68
VTI1B-204ENST00000554659 VSIG2Q96IQ7 327 aa10.78□□□□□ -0.68
VTI1B-204ENST00000554659 MRPL36Q9P0J6 103 aaKnown RBP10.77□□□□□ -0.68
VTI1B-204ENST00000554659 SVIPQ8NHG7 77 aa10.77□□□□□ -0.69
VTI1B-204ENST00000554659 IGLV10-54A0A075B6I4 117 aa10.77□□□□□ -0.69
VTI1B-204ENST00000554659 DAZ2Q13117 558 aaKnown RBP10.77□□□□□ -0.69
VTI1B-204ENST00000554659 DAZ4Q86SG3 579 aaKnown RBP10.77□□□□□ -0.69
VTI1B-204ENST00000554659 C5orf56Q8N8D9 126 aa10.77□□□□□ -0.69
VTI1B-204ENST00000554659 DAZ3Q9NR90 486 aaKnown RBP10.77□□□□□ -0.69
VTI1B-204ENST00000554659 E7EUB6 86 aa10.76□□□□□ -0.69
VTI1B-204ENST00000554659 ODF1Q14990 250 aa10.76□□□□□ -0.69
VTI1B-204ENST00000554659 K7EQD1 137 aa10.76□□□□□ -0.69
VTI1B-204ENST00000554659 CAMK2N2Q96S95 79 aa10.76□□□□□ -0.69
VTI1B-204ENST00000554659 RPL18AQ02543 176 aaKnown RBP10.76□□□□□ -0.69
VTI1B-204ENST00000554659 SPATA12Q7Z6I5 190 aa10.76□□□□□ -0.69
VTI1B-204ENST00000554659 C14orf132Q9NPU4 83 aa10.76□□□□□ -0.69
VTI1B-204ENST00000554659 A0A1B0GXF2 115 aa10.76□□□□□ -0.69
VTI1B-204ENST00000554659 C11orf86A6NJI1 115 aa10.76□□□□□ -0.69
VTI1B-204ENST00000554659 K7EMT4 169 aa10.75□□□□□ -0.69
VTI1B-204ENST00000554659 ZNF503Q96F45 646 aa10.75□□□□□ -0.69
VTI1B-204ENST00000554659 C2orf70A6NJV1 201 aa10.75□□□□□ -0.69
VTI1B-204ENST00000554659 C16orf74Q96GX8 76 aa10.75□□□□□ -0.69
VTI1B-204ENST00000554659 IGHV4-61A0A0C4DH41 118 aa10.75□□□□□ -0.69
VTI1B-204ENST00000554659 CCL24O00175 119 aa10.75□□□□□ -0.69
VTI1B-204ENST00000554659 TRAV26-1A0A087WT03 109 aa10.74□□□□□ -0.69
VTI1B-204ENST00000554659 NDUFB1O75438 58 aa10.74□□□□□ -0.69
VTI1B-204ENST00000554659 IGHV4-38-2P0DP08 117 aa10.74□□□□□ -0.69
VTI1B-204ENST00000554659 RPL39P62891 51 aaKnown RBP10.74□□□□□ -0.69
VTI1B-204ENST00000554659 LECT2O14960 151 aa10.74□□□□□ -0.69
VTI1B-204ENST00000554659 DEFB136Q30KP8 78 aa10.74□□□□□ -0.69
VTI1B-204ENST00000554659 CRYGBP07316 175 aa10.73□□□□□ -0.69
VTI1B-204ENST00000554659 BLCAPP62952 87 aa10.73□□□□□ -0.69
VTI1B-204ENST00000554659 APRG1Q8IVJ8 170 aa10.73□□□□□ -0.69
VTI1B-204ENST00000554659 Q8N1Y9 231 aa10.73□□□□□ -0.69
VTI1B-204ENST00000554659 SLURP1P55000 103 aa10.73□□□□□ -0.69
VTI1B-204ENST00000554659 SEM1Q6ZVN7 128 aa10.73□□□□□ -0.69
VTI1B-204ENST00000554659 SPRY4Q9C004 299 aa10.73□□□□□ -0.69
VTI1B-204ENST00000554659 IGKV1D-37A0A075B6S9 117 aa10.73□□□□□ -0.69
VTI1B-204ENST00000554659 CLEC2BQ92478 149 aa10.73□□□□□ -0.69
VTI1B-204ENST00000554659 LGALS9O00182 355 aa10.73□□□□□ -0.69
VTI1B-204ENST00000554659 Q8N7P7 452 aa10.73□□□□□ -0.69
VTI1B-204ENST00000554659 TRBV10-2A0A0K0K1G8 114 aa10.72□□□□□ -0.69
VTI1B-204ENST00000554659 COX7A2LO14548 114 aa10.72□□□□□ -0.69
VTI1B-204ENST00000554659 ATP6V0E2Q8NHE4 81 aa10.72□□□□□ -0.69
VTI1B-204ENST00000554659 ZGRF1Q86YA3 2104 aa10.72□□□□□ -0.69
VTI1B-204ENST00000554659 IGLV2-8P01709 118 aa10.72□□□□□ -0.69
VTI1B-204ENST00000554659 TMEM61Q8N0U2 210 aa10.72□□□□□ -0.69
VTI1B-204ENST00000554659 GYPEP15421 78 aa10.72□□□□□ -0.69
VTI1B-204ENST00000554659 PIFOQ8TCI5 191 aa10.72□□□□□ -0.69
VTI1B-204ENST00000554659 PTH2Q96A98 100 aa10.72□□□□□ -0.69
VTI1B-204ENST00000554659 BRK1Q8WUW1 75 aa10.71□□□□□ -0.69
VTI1B-204ENST00000554659 G3V4G9 280 aa10.71□□□□□ -0.69
VTI1B-204ENST00000554659 MED13Q9UHV7 2174 aa10.71□□□□□ -0.69
VTI1B-204ENST00000554659 JMJD7-PLA2G4BH0Y9G9 81 aa10.71□□□□□ -0.69
VTI1B-204ENST00000554659 LINC00574Q9H8X3 128 aa10.71□□□□□ -0.7
VTI1B-204ENST00000554659 Q6ZPA2 131 aa10.71□□□□□ -0.7
VTI1B-204ENST00000554659 Q71RC1 249 aaPredicted RBP10.71□□□□□ -0.7
VTI1B-204ENST00000554659 GPHB5Q86YW7 130 aa10.71□□□□□ -0.7
VTI1B-204ENST00000554659 TNRC6AQ8NDV7 1962 aaKnown RBP10.7□□□□□ -0.7
VTI1B-204ENST00000554659 ZNF295-AS1Q8N0V1 137 aa10.7□□□□□ -0.7
VTI1B-204ENST00000554659 NCKAP5O14513 1909 aa10.7□□□□□ -0.7
VTI1B-204ENST00000554659 H3BT86 120 aa10.7□□□□□ -0.7
VTI1B-204ENST00000554659 MSMPQ1L6U9 139 aa10.7□□□□□ -0.7
VTI1B-204ENST00000554659 TMEM89A2RUT3 159 aa10.7□□□□□ -0.7
VTI1B-204ENST00000554659 FANCD2OSQ96PS1 177 aa10.7□□□□□ -0.7
VTI1B-204ENST00000554659 IGHV4-30-2A0A087WSY4 118 aa10.69□□□□□ -0.7
VTI1B-204ENST00000554659 BRWD1-AS2P59051 145 aa10.69□□□□□ -0.7
VTI1B-204ENST00000554659 TRBV7-3A0A075B6L6 115 aa10.69□□□□□ -0.7
VTI1B-204ENST00000554659 H3BQ85 93 aa10.69□□□□□ -0.7
VTI1B-204ENST00000554659 NCR3O14931 201 aa10.69□□□□□ -0.7
VTI1B-204ENST00000554659 TIRAPP58753 221 aa10.69□□□□□ -0.7
VTI1B-204ENST00000554659 C10orf105Q8TEF2 133 aa10.69□□□□□ -0.7
VTI1B-204ENST00000554659 CRIP3Q6Q6R5 217 aa10.69□□□□□ -0.7
VTI1B-204ENST00000554659 IGHV3-30P01768 117 aa10.68□□□□□ -0.7
VTI1B-204ENST00000554659 IGHV3-33P01772 117 aa10.68□□□□□ -0.7
VTI1B-204ENST00000554659 IGHV3-30-3P0DP02 117 aa10.68□□□□□ -0.7
VTI1B-204ENST00000554659 IGHV3-30-5P0DP03 117 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms