RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 TIMM8BQ9Y5J9 83 aaPredicted RBP11.54□□□□□ -0.56
NEK9-204ENST00000554258 RNASE3P12724 160 aaKnown RBP11.53□□□□□ -0.56
NEK9-204ENST00000554258 C10orf91Q5T1B1 145 aa11.53□□□□□ -0.56
NEK9-204ENST00000554258 LINC00612Q8N6U2 182 aa11.53□□□□□ -0.56
NEK9-204ENST00000554258 ISOC2Q96AB3 205 aa11.53□□□□□ -0.56
NEK9-204ENST00000554258 DAZAP1Q96EP5 407 aaKnown RBP11.53□□□□□ -0.56
NEK9-204ENST00000554258 C9orf85Q96MD7 179 aa11.53□□□□□ -0.56
NEK9-204ENST00000554258 SPXQ9BT56 116 aa11.53□□□□□ -0.56
NEK9-204ENST00000554258 UPK3BQ9BT76 320 aa11.53□□□□□ -0.56
NEK9-204ENST00000554258 OSTCQ9NRP0 149 aa11.53□□□□□ -0.56
NEK9-204ENST00000554258 A0A087WTM6 91 aa11.52□□□□□ -0.57
NEK9-204ENST00000554258 LYRM9A8MSI8 78 aa11.52□□□□□ -0.57
NEK9-204ENST00000554258 M0R036 132 aa11.52□□□□□ -0.57
NEK9-204ENST00000554258 P01737 135 aa11.52□□□□□ -0.57
NEK9-204ENST00000554258 DEFB130BP0DP73 79 aa11.52□□□□□ -0.57
NEK9-204ENST00000554258 DEFB130AP0DP74 79 aa11.52□□□□□ -0.57
NEK9-204ENST00000554258 ADCYAP1P18509 176 aa11.52□□□□□ -0.57
NEK9-204ENST00000554258 RPL19P84098 196 aaKnown RBP11.52□□□□□ -0.57
NEK9-204ENST00000554258 ZNF415Q09FC8 603 aa11.52□□□□□ -0.57
NEK9-204ENST00000554258 LINC00528Q8N1L1 170 aa11.52□□□□□ -0.57
NEK9-204ENST00000554258 PTH2Q96A98 100 aa11.52□□□□□ -0.57
NEK9-204ENST00000554258 SEC11CQ9BY50 192 aa11.52□□□□□ -0.57
NEK9-204ENST00000554258 RNASE7Q9H1E1 156 aaKnown RBP11.52□□□□□ -0.57
NEK9-204ENST00000554258 DNAH8Q96JB1 4490 aa11.52□□□□□ -0.57
NEK9-204ENST00000554258 KRTAP9-6A0A140TA67 174 aa11.51□□□□□ -0.57
NEK9-204ENST00000554258 SNURFLB1AK76 121 aa11.51□□□□□ -0.57
NEK9-204ENST00000554258 SPINK4O60575 86 aa11.51□□□□□ -0.57
NEK9-204ENST00000554258 RPS20P60866 119 aaKnown RBP11.51□□□□□ -0.57
NEK9-204ENST00000554258 SSBP4Q9BWG4 385 aaPredicted RBP11.51□□□□□ -0.57
NEK9-204ENST00000554258 NOP10Q9NPE3 64 aaKnown RBP11.51□□□□□ -0.57
NEK9-204ENST00000554258 ASIPP42127 132 aa11.5□□□□□ -0.57
NEK9-204ENST00000554258 PNRC1Q12796 327 aaPredicted RBP11.5□□□□□ -0.57
NEK9-204ENST00000554258 OR2D3Q8NGH3 330 aa11.5□□□□□ -0.57
NEK9-204ENST00000554258 IL36BQ9NZH7 164 aa11.5□□□□□ -0.57
NEK9-204ENST00000554258 TMSB15BA0A087X1C1 80 aa11.49□□□□□ -0.57
NEK9-204ENST00000554258 GRIFINA4D1Z8 144 aa11.49□□□□□ -0.57
NEK9-204ENST00000554258 F8W036 122 aa11.49□□□□□ -0.57
NEK9-204ENST00000554258 ATP5G1P05496 136 aa11.49□□□□□ -0.57
NEK9-204ENST00000554258 ADIRFQ15847 76 aa11.49□□□□□ -0.57
NEK9-204ENST00000554258 CT83Q5H943 113 aa11.49□□□□□ -0.57
NEK9-204ENST00000554258 RPP21Q9H633 154 aaKnown RBP11.49□□□□□ -0.57
NEK9-204ENST00000554258 CARHSP1Q9Y2V2 147 aaKnown RBP11.49□□□□□ -0.57
NEK9-204ENST00000554258 SNAI2O43623 268 aa11.48□□□□□ -0.57
NEK9-204ENST00000554258 GATCO43716 136 aaKnown RBP11.48□□□□□ -0.57
NEK9-204ENST00000554258 ARMS2P0C7Q2 107 aa11.48□□□□□ -0.57
NEK9-204ENST00000554258 IGLC6P0CF74 106 aa11.48□□□□□ -0.57
NEK9-204ENST00000554258 NDUFA5Q16718 116 aa11.48□□□□□ -0.57
NEK9-204ENST00000554258 PIK3CD-AS1Q5SR53 167 aa11.48□□□□□ -0.57
NEK9-204ENST00000554258 RASL10AQ92737 203 aa11.48□□□□□ -0.57
NEK9-204ENST00000554258 SFRP2Q96HF1 295 aa11.48□□□□□ -0.57
NEK9-204ENST00000554258 MRPS16Q9Y3D3 137 aaKnown RBP11.48□□□□□ -0.57
NEK9-204ENST00000554258 V9GYV3 84 aa11.48□□□□□ -0.57
NEK9-204ENST00000554258 XKRY2A2RUG3 117 aa11.47□□□□□ -0.57
NEK9-204ENST00000554258 M0R2P5 195 aa11.47□□□□□ -0.57
NEK9-204ENST00000554258 OR5AL1P0C617 328 aa11.47□□□□□ -0.57
NEK9-204ENST00000554258 S100A4P26447 101 aaKnown RBP11.47□□□□□ -0.57
NEK9-204ENST00000554258 FOXA3P55318 350 aaPredicted RBP11.47□□□□□ -0.57
NEK9-204ENST00000554258 ESRGQ1W209 222 aa11.46□□□□□ -0.57
NEK9-204ENST00000554258 Q6ZTI0 123 aa11.46□□□□□ -0.57
NEK9-204ENST00000554258 SLC7A5P1Q8MH63 180 aa11.46□□□□□ -0.57
NEK9-204ENST00000554258 C15orf54Q8N8G6 183 aa11.46□□□□□ -0.57
NEK9-204ENST00000554258 OR10G8Q8NGN5 311 aa11.46□□□□□ -0.57
NEK9-204ENST00000554258 IGLV5-52A0A0A0MRZ9 124 aa11.45□□□□□ -0.58
NEK9-204ENST00000554258 FAM231BA6NCW3 169 aa11.45□□□□□ -0.58
NEK9-204ENST00000554258 A8MWL6 223 aa11.45□□□□□ -0.58
NEK9-204ENST00000554258 H3BVH4 76 aa11.45□□□□□ -0.58
NEK9-204ENST00000554258 NXPH4O95158 308 aa11.45□□□□□ -0.58
NEK9-204ENST00000554258 GZMBP10144 247 aa11.45□□□□□ -0.58
NEK9-204ENST00000554258 TRGV1A0A0A0MS02 117 aa11.44□□□□□ -0.58
NEK9-204ENST00000554258 WDR73Q6P4I2 378 aa11.44□□□□□ -0.58
NEK9-204ENST00000554258 GTSF1Q8WW33 167 aa11.44□□□□□ -0.58
NEK9-204ENST00000554258 GFRA4Q9GZZ7 299 aa11.44□□□□□ -0.58
NEK9-204ENST00000554258 MRPL16Q9NX20 251 aaKnown RBP11.44□□□□□ -0.58
NEK9-204ENST00000554258 FAM30AQ9NZY2 134 aa11.44□□□□□ -0.58
NEK9-204ENST00000554258 TNFRSF18Q9Y5U5 241 aa11.44□□□□□ -0.58
NEK9-204ENST00000554258 GAGE12BA1L429 117 aa11.43□□□□□ -0.58
NEK9-204ENST00000554258 F2Z2F3 143 aa11.43□□□□□ -0.58
NEK9-204ENST00000554258 GAGE7O76087 117 aa11.43□□□□□ -0.58
NEK9-204ENST00000554258 GAGE12FP0CL80 117 aa11.43□□□□□ -0.58
NEK9-204ENST00000554258 GAGE12GP0CL81 117 aa11.43□□□□□ -0.58
NEK9-204ENST00000554258 GAGE12IP0CL82 117 aa11.43□□□□□ -0.58
NEK9-204ENST00000554258 NFE4Q86UQ8 179 aa11.43□□□□□ -0.58
NEK9-204ENST00000554258 FER1L6-AS1Q8NA97 138 aa11.43□□□□□ -0.58
NEK9-204ENST00000554258 TSKUQ8WUA8 353 aa11.43□□□□□ -0.58
NEK9-204ENST00000554258 CNFNQ9BYD5 112 aa11.43□□□□□ -0.58
NEK9-204ENST00000554258 PPP1R2P9O14990 202 aa11.42□□□□□ -0.58
NEK9-204ENST00000554258 CTRLP40313 264 aa11.42□□□□□ -0.58
NEK9-204ENST00000554258 ZNF876PQ49A33 203 aa11.42□□□□□ -0.58
NEK9-204ENST00000554258 DMRTA1Q5VZB9 504 aa11.42□□□□□ -0.58
NEK9-204ENST00000554258 ANAPC16Q96DE5 110 aa11.42□□□□□ -0.58
NEK9-204ENST00000554258 PHLDA3Q9Y5J5 127 aa11.42□□□□□ -0.58
NEK9-204ENST00000554258 TNXBP22105 4242 aa11.42□□□□□ -0.58
NEK9-204ENST00000554258 MT-ND4LP03901 98 aa11.41□□□□□ -0.58
NEK9-204ENST00000554258 LYZL1Q6UWQ5 148 aa11.41□□□□□ -0.58
NEK9-204ENST00000554258 OR10AG1Q8NH19 301 aa11.41□□□□□ -0.58
NEK9-204ENST00000554258 TRAV26-1A0A087WT03 109 aa11.4□□□□□ -0.58
NEK9-204ENST00000554258 SMIM27A0A1W2PRY6 76 aa11.4□□□□□ -0.58
NEK9-204ENST00000554258 RS1O15537 224 aa11.4□□□□□ -0.58
NEK9-204ENST00000554258 ZFP82Q8N141 532 aa11.4□□□□□ -0.58
NEK9-204ENST00000554258 TRAV4A0A0B4J268 109 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms